BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008346
         (1860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]   163   7e-51
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   163   1e-50
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   169   2e-50
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   169   2e-50
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   176   2e-41

>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score =  163 bits (413), Expect(2) = 7e-51
 Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 6/268 (2%)
 Frame = +2

Query: 305  DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQEQ--- 475
            D+I++LP  +++KIL+L+ IRD VR S LS KWR+KW+ +P +VFD   +  S Q+Q   
Sbjct: 6    DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65

Query: 476  -RNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652
               L + ++HVL LH G ++KF +S       +D+DRWIL L R  ++  IL+  +G  Y
Sbjct: 66   KNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRTPIREFILEIWKGQHY 125

Query: 653  KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829
            K+PS L +CQ L  L+L  S+L  P   K F +L  LDL  + +  +    L+ +CP L+
Sbjct: 126  KLPSCLYNCQSLIHLELFNSLLKPPPTFKGFXSLKSLDLQHIIMAQDAFENLISSCPLLE 185

Query: 830  KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEM-LPLVSEASLPDQ 1006
            K  L   DGFT LNI APNL  F        + F NT  L + +I + + + ++ +L D 
Sbjct: 186  KFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADG 245

Query: 1007 ITNRLDVRLTGLINVQELYICKNFMEVI 1090
             +  L      L  +Q L I   F++ +
Sbjct: 246  NSRNLVKFFAHLPRIQRLEIQSYFLKYL 273



 Score = 65.9 bits (159), Expect(2) = 7e-51
 Identities = 46/149 (30%), Positives = 76/149 (51%)
 Frame = +3

Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352
            LK LAA  +P +L      LT +S+ +NF++ ++N TALCL RSSP L  L + +    Q
Sbjct: 270  LKYLAAGNVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQELEMLARPEEQ 329

Query: 1353 ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLHTIRITWDA 1532
              L     +W+        FA L+ + L G  G   +  F+ F+L  + +L  + +    
Sbjct: 330  TLLETSTTLWKK-EHWNYXFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTV---- 384

Query: 1533 TVEKGTKRMDTLEDMMQFCRASPRARVIF 1619
                G    + ++D+++F RAS RA +I+
Sbjct: 385  KPASGDGAWELIKDLLRFRRASVRAEIIY 413


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
            vinifera]
          Length = 416

 Score =  163 bits (412), Expect(2) = 1e-50
 Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 6/268 (2%)
 Frame = +2

Query: 305  DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQEQ--- 475
            D+I++LP  +++KIL+L+ IRD VR S LS KWR+KW+ +P +VFD   +  S Q+Q   
Sbjct: 6    DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65

Query: 476  -RNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652
               L + ++HVL LH G ++KF +S       +D+DRWIL L R  ++  IL+  +G  Y
Sbjct: 66   KNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRTPIREFILEIWKGQHY 125

Query: 653  KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829
            K+PS L +CQ L  L+L  S+L  P   K F +L  LDL  + +  +    L+ +CP L+
Sbjct: 126  KLPSCLYNCQSLIHLELFNSLLKPPPTFKGFMSLKSLDLQHIIMAQDAFENLISSCPLLE 185

Query: 830  KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEM-LPLVSEASLPDQ 1006
            K  L   DGFT LNI APNL  F        + F NT  L + +I + + + ++ +L D 
Sbjct: 186  KFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADG 245

Query: 1007 ITNRLDVRLTGLINVQELYICKNFMEVI 1090
             +  L      L  +Q L I   F++ +
Sbjct: 246  NSRNLVKFFAHLPRIQRLEIQSYFLKYL 273



 Score = 65.5 bits (158), Expect(2) = 1e-50
 Identities = 46/149 (30%), Positives = 76/149 (51%)
 Frame = +3

Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352
            LK LAA  +P +L      LT +S+ +NF++ ++N TALCL RSSP L  L + +    Q
Sbjct: 270  LKYLAAGNVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQELEMLARPEEQ 329

Query: 1353 ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLHTIRITWDA 1532
              L     +W+        FA L+ + L G  G   +  F+ F+L  + +L  + +    
Sbjct: 330  TLLETSTTLWKK-EHWNYSFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTV---- 384

Query: 1533 TVEKGTKRMDTLEDMMQFCRASPRARVIF 1619
                G    + ++D+++F RAS RA +I+
Sbjct: 385  KPASGDGAWELIKDLLRFRRASVRAEIIY 413


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 660

 Score =  169 bits (429), Expect(2) = 2e-50
 Identities = 105/269 (39%), Positives = 153/269 (56%), Gaps = 7/269 (2%)
 Frame = +2

Query: 305  DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 472
            DRI+SLP  ++++IL+++PI++ VRTS LS KWRYKW  +P +VFD+  I  + ++    
Sbjct: 249  DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 308

Query: 473  QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652
            +  L+  ++HVL LH G + KF +S   +    D+DRW L L R+ VK  +L+  +G RY
Sbjct: 309  KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRY 368

Query: 653  KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829
            K+PS L SCQ L  L+L    L  PS  + F NL  LDL  VTL+ +    L+  CP L+
Sbjct: 369  KIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLE 428

Query: 830  KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEMLPLV--SEASLPD 1003
            +L L   DGF  LNI APNL  F +      I F NT QL   +I +      S+  L  
Sbjct: 429  RLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHG 488

Query: 1004 QITNRLDVRLTGLINVQELYICKNFMEVI 1090
            + +N ++  L  L  +Q L I   F++ +
Sbjct: 489  RTSNLVEF-LIHLPRIQRLEIQSYFLKYL 516



 Score = 57.8 bits (138), Expect(2) = 2e-50
 Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
 Frame = +3

Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352
            LK LA   +P +L      L+ +S+ +NF + K+ S ALCLFRSSP L  L + +    Q
Sbjct: 513  LKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQ 572

Query: 1353 -ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLH--TIRIT 1523
             + L    + WE +  +  +  R++++ ++G  G + E  F+ F+L  + +L   T++  
Sbjct: 573  PLPLAHHADCWEDVYLDWPVM-RVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPA 631

Query: 1524 WDATVEKGTKRMDTLEDMMQFCRASPRARVIF 1619
             +A+ E        ++++++  RAS RA VI+
Sbjct: 632  LNASPE-------LVKELLRLRRASGRAEVIY 656


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 428

 Score =  169 bits (429), Expect(2) = 2e-50
 Identities = 105/269 (39%), Positives = 153/269 (56%), Gaps = 7/269 (2%)
 Frame = +2

Query: 305  DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 472
            DRI+SLP  ++++IL+++PI++ VRTS LS KWRYKW  +P +VFD+  I  + ++    
Sbjct: 17   DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 76

Query: 473  QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652
            +  L+  ++HVL LH G + KF +S   +    D+DRW L L R+ VK  +L+  +G RY
Sbjct: 77   KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRY 136

Query: 653  KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829
            K+PS L SCQ L  L+L    L  PS  + F NL  LDL  VTL+ +    L+  CP L+
Sbjct: 137  KIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLE 196

Query: 830  KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEMLPLV--SEASLPD 1003
            +L L   DGF  LNI APNL  F +      I F NT QL   +I +      S+  L  
Sbjct: 197  RLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHG 256

Query: 1004 QITNRLDVRLTGLINVQELYICKNFMEVI 1090
            + +N ++  L  L  +Q L I   F++ +
Sbjct: 257  RTSNLVEF-LIHLPRIQRLEIQSYFLKYL 284



 Score = 57.8 bits (138), Expect(2) = 2e-50
 Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
 Frame = +3

Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352
            LK LA   +P +L      L+ +S+ +NF + K+ S ALCLFRSSP L  L + +    Q
Sbjct: 281  LKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQ 340

Query: 1353 -ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLH--TIRIT 1523
             + L    + WE +  +  +  R++++ ++G  G + E  F+ F+L  + +L   T++  
Sbjct: 341  PLPLAHHADCWEDVYLDWPVM-RVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPA 399

Query: 1524 WDATVEKGTKRMDTLEDMMQFCRASPRARVIF 1619
             +A+ E        ++++++  RAS RA VI+
Sbjct: 400  LNASPE-------LVKELLRLRRASGRAEVIY 424


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score =  176 bits (445), Expect = 2e-41
 Identities = 98/225 (43%), Positives = 136/225 (60%), Gaps = 5/225 (2%)
 Frame = +2

Query: 305 DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 472
           DRI+ LP  +++++L+ + IR+ VRTS LS KWRYKW  +P +VFD H +  + Q+    
Sbjct: 17  DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76

Query: 473 QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652
           +  L   ++HVL LH G +NKF +S   +    D+DRW L LCRKS+K  +L+  +G RY
Sbjct: 77  KNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQRY 136

Query: 653 KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829
           K+ S L SCQ L  L+L    L  PS  + F+NL  LDL  VTL  +    L+ +CP L+
Sbjct: 137 KIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPLLE 196

Query: 830 KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANI 964
           +L L   DGFT LNI APNL+ F +      I F+NT QL   +I
Sbjct: 197 RLTLMNFDGFTNLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSI 241



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 43/149 (28%), Positives = 79/149 (53%)
 Frame = +3

Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352
            LK LA  V+P +L      L+ +S+ +NF + K+ S +LCL RSSP L  L + +    Q
Sbjct: 281  LKYLAVGVVPIKLPRPCIDLSYLSIRINFNDLKEISASLCLLRSSPNLQELEILARPEEQ 340

Query: 1353 ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLHTIRITWDA 1532
              LL     WE +     +  +L+ + ++G  G + E  F+ F+L  + +L  + +   A
Sbjct: 341  TVLLTHTYCWEDVYFSCPVM-QLRYVKIDGISGIKPELDFINFLLLHSPVLERMTVKPVA 399

Query: 1533 TVEKGTKRMDTLEDMMQFCRASPRARVIF 1619
             V      ++ ++++++F RAS +A +I+
Sbjct: 400  NV-----GLELMKELLRFRRASGQAEIIY 423