BLASTX nr result
ID: Coptis24_contig00008346
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008346 (1860 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera] 163 7e-51 ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 163 1e-50 ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 169 2e-50 ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 169 2e-50 ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 176 2e-41 >emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera] Length = 416 Score = 163 bits (413), Expect(2) = 7e-51 Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 6/268 (2%) Frame = +2 Query: 305 DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQEQ--- 475 D+I++LP +++KIL+L+ IRD VR S LS KWR+KW+ +P +VFD + S Q+Q Sbjct: 6 DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65 Query: 476 -RNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652 L + ++HVL LH G ++KF +S +D+DRWIL L R ++ IL+ +G Y Sbjct: 66 KNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRTPIREFILEIWKGQHY 125 Query: 653 KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829 K+PS L +CQ L L+L S+L P K F +L LDL + + + L+ +CP L+ Sbjct: 126 KLPSCLYNCQSLIHLELFNSLLKPPPTFKGFXSLKSLDLQHIIMAQDAFENLISSCPLLE 185 Query: 830 KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEM-LPLVSEASLPDQ 1006 K L DGFT LNI APNL F + F NT L + +I + + + ++ +L D Sbjct: 186 KFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADG 245 Query: 1007 ITNRLDVRLTGLINVQELYICKNFMEVI 1090 + L L +Q L I F++ + Sbjct: 246 NSRNLVKFFAHLPRIQRLEIQSYFLKYL 273 Score = 65.9 bits (159), Expect(2) = 7e-51 Identities = 46/149 (30%), Positives = 76/149 (51%) Frame = +3 Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352 LK LAA +P +L LT +S+ +NF++ ++N TALCL RSSP L L + + Q Sbjct: 270 LKYLAAGNVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQELEMLARPEEQ 329 Query: 1353 ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLHTIRITWDA 1532 L +W+ FA L+ + L G G + F+ F+L + +L + + Sbjct: 330 TLLETSTTLWKK-EHWNYXFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTV---- 384 Query: 1533 TVEKGTKRMDTLEDMMQFCRASPRARVIF 1619 G + ++D+++F RAS RA +I+ Sbjct: 385 KPASGDGAWELIKDLLRFRRASVRAEIIY 413 >ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis vinifera] Length = 416 Score = 163 bits (412), Expect(2) = 1e-50 Identities = 99/268 (36%), Positives = 150/268 (55%), Gaps = 6/268 (2%) Frame = +2 Query: 305 DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQEQ--- 475 D+I++LP +++KIL+L+ IRD VR S LS KWR+KW+ +P +VFD + S Q+Q Sbjct: 6 DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65 Query: 476 -RNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652 L + ++HVL LH G ++KF +S +D+DRWIL L R ++ IL+ +G Y Sbjct: 66 KNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRTPIREFILEIWKGQHY 125 Query: 653 KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829 K+PS L +CQ L L+L S+L P K F +L LDL + + + L+ +CP L+ Sbjct: 126 KLPSCLYNCQSLIHLELFNSLLKPPPTFKGFMSLKSLDLQHIIMAQDAFENLISSCPLLE 185 Query: 830 KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEM-LPLVSEASLPDQ 1006 K L DGFT LNI APNL F + F NT L + +I + + + ++ +L D Sbjct: 186 KFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADG 245 Query: 1007 ITNRLDVRLTGLINVQELYICKNFMEVI 1090 + L L +Q L I F++ + Sbjct: 246 NSRNLVKFFAHLPRIQRLEIQSYFLKYL 273 Score = 65.5 bits (158), Expect(2) = 1e-50 Identities = 46/149 (30%), Positives = 76/149 (51%) Frame = +3 Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352 LK LAA +P +L LT +S+ +NF++ ++N TALCL RSSP L L + + Q Sbjct: 270 LKYLAAGNVPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQELEMLARPEEQ 329 Query: 1353 ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLHTIRITWDA 1532 L +W+ FA L+ + L G G + F+ F+L + +L + + Sbjct: 330 TLLETSTTLWKK-EHWNYSFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTV---- 384 Query: 1533 TVEKGTKRMDTLEDMMQFCRASPRARVIF 1619 G + ++D+++F RAS RA +I+ Sbjct: 385 KPASGDGAWELIKDLLRFRRASVRAEIIY 413 >ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 660 Score = 169 bits (429), Expect(2) = 2e-50 Identities = 105/269 (39%), Positives = 153/269 (56%), Gaps = 7/269 (2%) Frame = +2 Query: 305 DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 472 DRI+SLP ++++IL+++PI++ VRTS LS KWRYKW +P +VFD+ I + ++ Sbjct: 249 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 308 Query: 473 QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652 + L+ ++HVL LH G + KF +S + D+DRW L L R+ VK +L+ +G RY Sbjct: 309 KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRY 368 Query: 653 KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829 K+PS L SCQ L L+L L PS + F NL LDL VTL+ + L+ CP L+ Sbjct: 369 KIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLE 428 Query: 830 KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEMLPLV--SEASLPD 1003 +L L DGF LNI APNL F + I F NT QL +I + S+ L Sbjct: 429 RLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHG 488 Query: 1004 QITNRLDVRLTGLINVQELYICKNFMEVI 1090 + +N ++ L L +Q L I F++ + Sbjct: 489 RTSNLVEF-LIHLPRIQRLEIQSYFLKYL 516 Score = 57.8 bits (138), Expect(2) = 2e-50 Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 3/152 (1%) Frame = +3 Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352 LK LA +P +L L+ +S+ +NF + K+ S ALCLFRSSP L L + + Q Sbjct: 513 LKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQ 572 Query: 1353 -ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLH--TIRIT 1523 + L + WE + + + R++++ ++G G + E F+ F+L + +L T++ Sbjct: 573 PLPLAHHADCWEDVYLDWPVM-RVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPA 631 Query: 1524 WDATVEKGTKRMDTLEDMMQFCRASPRARVIF 1619 +A+ E ++++++ RAS RA VI+ Sbjct: 632 LNASPE-------LVKELLRLRRASGRAEVIY 656 >ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 428 Score = 169 bits (429), Expect(2) = 2e-50 Identities = 105/269 (39%), Positives = 153/269 (56%), Gaps = 7/269 (2%) Frame = +2 Query: 305 DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 472 DRI+SLP ++++IL+++PI++ VRTS LS KWRYKW +P +VFD+ I + ++ Sbjct: 17 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 76 Query: 473 QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652 + L+ ++HVL LH G + KF +S + D+DRW L L R+ VK +L+ +G RY Sbjct: 77 KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRY 136 Query: 653 KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829 K+PS L SCQ L L+L L PS + F NL LDL VTL+ + L+ CP L+ Sbjct: 137 KIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLE 196 Query: 830 KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANIEMLPLV--SEASLPD 1003 +L L DGF LNI APNL F + I F NT QL +I + S+ L Sbjct: 197 RLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHG 256 Query: 1004 QITNRLDVRLTGLINVQELYICKNFMEVI 1090 + +N ++ L L +Q L I F++ + Sbjct: 257 RTSNLVEF-LIHLPRIQRLEIQSYFLKYL 284 Score = 57.8 bits (138), Expect(2) = 2e-50 Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 3/152 (1%) Frame = +3 Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352 LK LA +P +L L+ +S+ +NF + K+ S ALCLFRSSP L L + + Q Sbjct: 281 LKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQ 340 Query: 1353 -ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLH--TIRIT 1523 + L + WE + + + R++++ ++G G + E F+ F+L + +L T++ Sbjct: 341 PLPLAHHADCWEDVYLDWPVM-RVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPA 399 Query: 1524 WDATVEKGTKRMDTLEDMMQFCRASPRARVIF 1619 +A+ E ++++++ RAS RA VI+ Sbjct: 400 LNASPE-------LVKELLRLRRASGRAEVIY 424 >ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max] Length = 427 Score = 176 bits (445), Expect = 2e-41 Identities = 98/225 (43%), Positives = 136/225 (60%), Gaps = 5/225 (2%) Frame = +2 Query: 305 DRITSLPTELVNKILTLVPIRDVVRTSALSRKWRYKWMYIPEIVFDAHSIPPSIQE---- 472 DRI+ LP +++++L+ + IR+ VRTS LS KWRYKW +P +VFD H + + Q+ Sbjct: 17 DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76 Query: 473 QRNLADSVNHVLSLHYGRLNKFGMSGYLVSSCNDVDRWILLLCRKSVKTIILDFPQGDRY 652 + L ++HVL LH G +NKF +S + D+DRW L LCRKS+K +L+ +G RY Sbjct: 77 KNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQRY 136 Query: 653 KVPSSLVSCQKLELLKLHCSILNLPSHAKCFENLVDLDLCQVTLTNETIARLMVNCP-LQ 829 K+ S L SCQ L L+L L PS + F+NL LDL VTL + L+ +CP L+ Sbjct: 137 KIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPLLE 196 Query: 830 KLILTYCDGFTRLNICAPNLIIFVLCSPCGSIYFDNTPQLRSANI 964 +L L DGFT LNI APNL+ F + I F+NT QL +I Sbjct: 197 RLTLMNFDGFTNLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSI 241 Score = 60.1 bits (144), Expect = 2e-06 Identities = 43/149 (28%), Positives = 79/149 (53%) Frame = +3 Query: 1173 LKILAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQ 1352 LK LA V+P +L L+ +S+ +NF + K+ S +LCL RSSP L L + + Q Sbjct: 281 LKYLAVGVVPIKLPRPCIDLSYLSIRINFNDLKEISASLCLLRSSPNLQELEILARPEEQ 340 Query: 1353 ITLLDDDNIWEPIPDEEIIFARLKNMVLNGFMGSQHEASFVQFVLRSAVMLHTIRITWDA 1532 LL WE + + +L+ + ++G G + E F+ F+L + +L + + A Sbjct: 341 TVLLTHTYCWEDVYFSCPVM-QLRYVKIDGISGIKPELDFINFLLLHSPVLERMTVKPVA 399 Query: 1533 TVEKGTKRMDTLEDMMQFCRASPRARVIF 1619 V ++ ++++++F RAS +A +I+ Sbjct: 400 NV-----GLELMKELLRFRRASGQAEIIY 423