BLASTX nr result
ID: Coptis24_contig00008342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008342
(1901 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265088.1| PREDICTED: UDP-glucuronate 4-epimerase 6 [Vi... 755 0.0
emb|CAN83418.1| hypothetical protein VITISV_041351 [Vitis vinifera] 755 0.0
ref|XP_002298679.1| predicted protein [Populus trichocarpa] gi|1... 721 0.0
ref|XP_003601662.1| UDP-D-glucuronic acid 4-epimerase [Medicago ... 721 0.0
ref|XP_004138968.1| PREDICTED: UDP-glucuronate 4-epimerase 6-lik... 719 0.0
>ref|XP_002265088.1| PREDICTED: UDP-glucuronate 4-epimerase 6 [Vitis vinifera]
Length = 451
Score = 755 bits (1950), Expect = 0.0
Identities = 364/440 (82%), Positives = 398/440 (90%)
Frame = -3
Query: 1857 MASPPDMSKTTTGKLERYNSYIRRINHTKFLAASSKXXXXXXXXXXXXXXXXXTINYPPL 1678
MASPPD SKTT KLERYNSYIRR+N TK +AASSK T+NYPPL
Sbjct: 1 MASPPDTSKTT--KLERYNSYIRRVNSTKLMAASSKLLFRATLLVALVLIFFFTLNYPPL 58
Query: 1677 SDNPHHTLHHHNFLSSTFYGGGAAWEKKVRHSSTPRRPNGFSVLVTGAGGFVGSHCALAL 1498
SDNPHH L H NFLSS FYG GA+WEK+VRHSSTPRRPNGFSVLVTGAGGFVG+HC+LAL
Sbjct: 59 SDNPHHVLTHQNFLSSAFYGSGASWEKQVRHSSTPRRPNGFSVLVTGAGGFVGTHCSLAL 118
Query: 1497 KKRGDGVLGLDNFNSYYDPSLKRARQNLLAQHQIFIVEADLNDAHLVAKLFDVVPFTHIL 1318
KKRGDGVLGLDNFN YYDPSLKRARQ +L++HQIFIVE DLNDA L++KLFD+VPFTHIL
Sbjct: 119 KKRGDGVLGLDNFNDYYDPSLKRARQAMLSKHQIFIVEGDLNDAPLLSKLFDMVPFTHIL 178
Query: 1317 HLAAQAGVRYAMENPQSYVNSNIAGFVNLLEIAKATNPQPSIVWASSSSVYGLNTENPFS 1138
HLAAQAGVRYAM+NPQSYV SNIAGFVNLLEIAKA +PQP+IVWASSSSVYGLNTENPFS
Sbjct: 179 HLAAQAGVRYAMQNPQSYVRSNIAGFVNLLEIAKAADPQPAIVWASSSSVYGLNTENPFS 238
Query: 1137 ESHRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDI 958
E HRTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTKDI
Sbjct: 239 ELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDI 298
Query: 957 LQGKPITIYQTADDKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKAPAQLRIYNLG 778
LQGKPITIYQT DDKEVARDFTYIDD+VKGC+GALDTAEKSTGSGGKK+ PAQLRIYNLG
Sbjct: 299 LQGKPITIYQTQDDKEVARDFTYIDDVVKGCLGALDTAEKSTGSGGKKRGPAQLRIYNLG 358
Query: 777 NTSPVSVGKLVSIIENILNAKAKKHVIKMPRNGDVPFTHANVSLAYKDFGYRPTTDLASG 598
NTSPV VG+LV I+E +LN KAKKHVIKMPRNGDVP+THANVSLAY+DFGY+P+TDLA+G
Sbjct: 359 NTSPVPVGRLVGILEGLLNVKAKKHVIKMPRNGDVPYTHANVSLAYRDFGYKPSTDLATG 418
Query: 597 LRKFVKWYIGYYGIESKLTK 538
LR+FVKWY+ YYGI++++ K
Sbjct: 419 LRRFVKWYVSYYGIQTRVKK 438
>emb|CAN83418.1| hypothetical protein VITISV_041351 [Vitis vinifera]
Length = 459
Score = 755 bits (1949), Expect = 0.0
Identities = 364/438 (83%), Positives = 397/438 (90%)
Frame = -3
Query: 1857 MASPPDMSKTTTGKLERYNSYIRRINHTKFLAASSKXXXXXXXXXXXXXXXXXTINYPPL 1678
MASPPD SKTT KLERYNSYIRR+N TK +AASSK T+NYPPL
Sbjct: 1 MASPPDTSKTT--KLERYNSYIRRVNSTKLMAASSKLLFRATLLVALVLIFFFTLNYPPL 58
Query: 1677 SDNPHHTLHHHNFLSSTFYGGGAAWEKKVRHSSTPRRPNGFSVLVTGAGGFVGSHCALAL 1498
SDNPHH L H NFLSS FYG GA+WEK+VRHSSTPRRPNGFSVLVTGAGGFVG+HC+LAL
Sbjct: 59 SDNPHHVLTHQNFLSSAFYGSGASWEKQVRHSSTPRRPNGFSVLVTGAGGFVGTHCSLAL 118
Query: 1497 KKRGDGVLGLDNFNSYYDPSLKRARQNLLAQHQIFIVEADLNDAHLVAKLFDVVPFTHIL 1318
KKRGDGVLGLDNFN YYDPSLKRARQ +L++HQIFIVE DLNDA L++KLFD+VPFTHIL
Sbjct: 119 KKRGDGVLGLDNFNDYYDPSLKRARQAMLSKHQIFIVEGDLNDAPLLSKLFDMVPFTHIL 178
Query: 1317 HLAAQAGVRYAMENPQSYVNSNIAGFVNLLEIAKATNPQPSIVWASSSSVYGLNTENPFS 1138
HLAAQAGVRYAM+NPQSYV SNIAGFVNLLEIAKA +PQP+IVWASSSSVYGLNTENPFS
Sbjct: 179 HLAAQAGVRYAMQNPQSYVRSNIAGFVNLLEIAKAADPQPAIVWASSSSVYGLNTENPFS 238
Query: 1137 ESHRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDI 958
E HRTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTKDI
Sbjct: 239 ELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDI 298
Query: 957 LQGKPITIYQTADDKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKAPAQLRIYNLG 778
LQGKPITIYQT DDKEVARDFTYIDD+VKGC+GALDTAEKSTGSGGKK+ PAQLRIYNLG
Sbjct: 299 LQGKPITIYQTQDDKEVARDFTYIDDVVKGCLGALDTAEKSTGSGGKKRGPAQLRIYNLG 358
Query: 777 NTSPVSVGKLVSIIENILNAKAKKHVIKMPRNGDVPFTHANVSLAYKDFGYRPTTDLASG 598
NTSPV VG+LV I+E +LN KAKKHVIKMPRNGDVP+THANVSLAY+DFGY+P+TDLA+G
Sbjct: 359 NTSPVPVGRLVGILEGLLNVKAKKHVIKMPRNGDVPYTHANVSLAYRDFGYKPSTDLATG 418
Query: 597 LRKFVKWYIGYYGIESKL 544
LR+FVKWY+ YYGI+++L
Sbjct: 419 LRRFVKWYVSYYGIQTRL 436
>ref|XP_002298679.1| predicted protein [Populus trichocarpa] gi|118482268|gb|ABK93061.1|
unknown [Populus trichocarpa] gi|222845937|gb|EEE83484.1|
predicted protein [Populus trichocarpa]
Length = 457
Score = 721 bits (1861), Expect = 0.0
Identities = 354/453 (78%), Positives = 396/453 (87%), Gaps = 6/453 (1%)
Frame = -3
Query: 1857 MASPPDMSKTTTGKLERYNSYIRRINHTKFLAASSKXXXXXXXXXXXXXXXXXTINYPPL 1678
MASPPD SKT KLERYNSY+RR++ TK L ASSK T+NYPPL
Sbjct: 1 MASPPDTSKTI--KLERYNSYLRRLHSTKVLNASSKLLFRATLLIALVLILFFTLNYPPL 58
Query: 1677 SDN-PHHT-LHHHNFLSSTFY----GGGAAWEKKVRHSSTPRRPNGFSVLVTGAGGFVGS 1516
SDN P+H LHHHNFLS+ F+ GGGAAWEK+VRHSSTP+R NG SVLVTGA GFVGS
Sbjct: 59 SDNIPNHAHLHHHNFLSTAFFTSSAGGGAAWEKQVRHSSTPKRRNGLSVLVTGAAGFVGS 118
Query: 1515 HCALALKKRGDGVLGLDNFNSYYDPSLKRARQNLLAQHQIFIVEADLNDAHLVAKLFDVV 1336
HC+LALKKRGDGVLGLDNFNSYYDP+LKRARQ LL +H++FIVE DLNDA L+ KLFDVV
Sbjct: 119 HCSLALKKRGDGVLGLDNFNSYYDPTLKRARQKLLLRHEVFIVEGDLNDASLLRKLFDVV 178
Query: 1335 PFTHILHLAAQAGVRYAMENPQSYVNSNIAGFVNLLEIAKATNPQPSIVWASSSSVYGLN 1156
PFTHILHLAAQAGVRYAM+NPQSYV+SNIAGFVNLLE+AKA NPQP+IVWASSSSVYGLN
Sbjct: 179 PFTHILHLAAQAGVRYAMQNPQSYVSSNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLN 238
Query: 1155 TENPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYF 976
T+ PFSE RTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF
Sbjct: 239 TQVPFSELDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYF 298
Query: 975 FFTKDILQGKPITIYQTADDKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKAPAQL 796
FFTKDILQGKPI +YQT DDK+VARDFTYIDD+VKGC+GALDTAEKSTGSGGKKK PAQL
Sbjct: 299 FFTKDILQGKPIDVYQTQDDKQVARDFTYIDDVVKGCLGALDTAEKSTGSGGKKKGPAQL 358
Query: 795 RIYNLGNTSPVSVGKLVSIIENILNAKAKKHVIKMPRNGDVPFTHANVSLAYKDFGYRPT 616
R+YNLGNTSPV V LVSI+E +L+ KAKKHVIKMPRNGDVP+THANV+LA+KDFGY+P+
Sbjct: 359 RVYNLGNTSPVPVANLVSILEGLLSTKAKKHVIKMPRNGDVPYTHANVTLAFKDFGYKPS 418
Query: 615 TDLASGLRKFVKWYIGYYGIESKLTKGNQSSDE 517
TDLA+GLRKFVKWY+ YYGI++++ KG+ + E
Sbjct: 419 TDLATGLRKFVKWYVNYYGIQTRVKKGSAINSE 451
>ref|XP_003601662.1| UDP-D-glucuronic acid 4-epimerase [Medicago truncatula]
gi|355490710|gb|AES71913.1| UDP-D-glucuronic acid
4-epimerase [Medicago truncatula]
Length = 447
Score = 721 bits (1860), Expect = 0.0
Identities = 349/447 (78%), Positives = 387/447 (86%)
Frame = -3
Query: 1857 MASPPDMSKTTTGKLERYNSYIRRINHTKFLAASSKXXXXXXXXXXXXXXXXXTINYPPL 1678
MASPPD SKT KLERYNSYIR++N TK L ASSK T NYPPL
Sbjct: 1 MASPPDTSKTI--KLERYNSYIRKVNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPL 58
Query: 1677 SDNPHHTLHHHNFLSSTFYGGGAAWEKKVRHSSTPRRPNGFSVLVTGAGGFVGSHCALAL 1498
SD+ +H H H+ ++ +GGG AWE+ VRHS+ PRRPNGF+VLVTGA GFVGSHC+LAL
Sbjct: 59 SDSTNHHFHTHSHFLTSAFGGGGAWERHVRHSAIPRRPNGFTVLVTGAAGFVGSHCSLAL 118
Query: 1497 KKRGDGVLGLDNFNSYYDPSLKRARQNLLAQHQIFIVEADLNDAHLVAKLFDVVPFTHIL 1318
KKRGDGV+GLDNFNSYYDPSLKRARQ LL QHQIFIVE DLNDA L+ KLFDVVP THIL
Sbjct: 119 KKRGDGVIGLDNFNSYYDPSLKRARQALLTQHQIFIVEGDLNDAPLLTKLFDVVPITHIL 178
Query: 1317 HLAAQAGVRYAMENPQSYVNSNIAGFVNLLEIAKATNPQPSIVWASSSSVYGLNTENPFS 1138
HLAAQAGVRYAM+NPQSY+ SNIAGFVNLLE++KA NPQP+IVWASSSSVYGLNTENPFS
Sbjct: 179 HLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVSKAANPQPAIVWASSSSVYGLNTENPFS 238
Query: 1137 ESHRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDI 958
E HRTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTKDI
Sbjct: 239 ELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDI 298
Query: 957 LQGKPITIYQTADDKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKAPAQLRIYNLG 778
L GK I +YQT + KEVARDFTYIDDIVKGC+GALDTAEKSTGSGGKKK PAQLRIYNLG
Sbjct: 299 LHGKTIDVYQTQEGKEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKKGPAQLRIYNLG 358
Query: 777 NTSPVSVGKLVSIIENILNAKAKKHVIKMPRNGDVPFTHANVSLAYKDFGYRPTTDLASG 598
NTSPV VGKLVSI+EN+L+ KAKKH+IKMPRNGDVP+THANV++AYKDF Y+PTTDLA+G
Sbjct: 359 NTSPVPVGKLVSILENLLSTKAKKHIIKMPRNGDVPYTHANVTMAYKDFAYKPTTDLATG 418
Query: 597 LRKFVKWYIGYYGIESKLTKGNQSSDE 517
LRKFVKWY+ YYGI+S+L K N+ ++
Sbjct: 419 LRKFVKWYVRYYGIQSRLKKENELPED 445
>ref|XP_004138968.1| PREDICTED: UDP-glucuronate 4-epimerase 6-like [Cucumis sativus]
gi|449519212|ref|XP_004166629.1| PREDICTED:
UDP-glucuronate 4-epimerase 6-like [Cucumis sativus]
Length = 463
Score = 719 bits (1857), Expect = 0.0
Identities = 356/454 (78%), Positives = 393/454 (86%), Gaps = 8/454 (1%)
Frame = -3
Query: 1857 MASPPDMSKTTTGKLERYNSYIRRINHTKFLAASSKXXXXXXXXXXXXXXXXXTINYPPL 1678
MASPPD SKT KLERYNSY+R++N TK + ASSK T+NYPPL
Sbjct: 4 MASPPDTSKTL--KLERYNSYLRKVNSTKLINASSKLLFRATLLVALVLVFIFTLNYPPL 61
Query: 1677 SD----NPHHTLHHHNFLSSTFYGG----GAAWEKKVRHSSTPRRPNGFSVLVTGAGGFV 1522
S + +H H NFLSS FYGG GAAWEK+VRHSSTPRR NG SVLVTGA GFV
Sbjct: 62 SSENGSSGNHLHTHRNFLSSAFYGGSDQGGAAWEKQVRHSSTPRRLNGMSVLVTGAAGFV 121
Query: 1521 GSHCALALKKRGDGVLGLDNFNSYYDPSLKRARQNLLAQHQIFIVEADLNDAHLVAKLFD 1342
GSHC++ALKKRGDGVLGLDNFN+YYDPSLKRARQ+LL +HQIFIVE DLNDA L++KLFD
Sbjct: 122 GSHCSMALKKRGDGVLGLDNFNNYYDPSLKRARQSLLLKHQIFIVEGDLNDAALLSKLFD 181
Query: 1341 VVPFTHILHLAAQAGVRYAMENPQSYVNSNIAGFVNLLEIAKATNPQPSIVWASSSSVYG 1162
VVPFTHILHLAAQAGVRYAM+NPQSY+NSNIAGFVNLLE+AK +PQP+IVWASSSSVYG
Sbjct: 182 VVPFTHILHLAAQAGVRYAMQNPQSYINSNIAGFVNLLEVAKTADPQPAIVWASSSSVYG 241
Query: 1161 LNTENPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMA 982
LNTENPFSE HRTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMA
Sbjct: 242 LNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMA 301
Query: 981 YFFFTKDILQGKPITIYQTADDKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKAPA 802
YFFFTKDILQGK I IY+T D KEVARDFTYIDDIVKGC+GALDTAEKSTGSGGKKK PA
Sbjct: 302 YFFFTKDILQGKQIDIYKTHDAKEVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPA 361
Query: 801 QLRIYNLGNTSPVSVGKLVSIIENILNAKAKKHVIKMPRNGDVPFTHANVSLAYKDFGYR 622
QLRIYNLGNTSPV VGKLVS++EN+LN KAKKH+I MPRNGDVPFTHANVSLA KDFGY+
Sbjct: 362 QLRIYNLGNTSPVPVGKLVSVLENLLNTKAKKHIITMPRNGDVPFTHANVSLALKDFGYK 421
Query: 621 PTTDLASGLRKFVKWYIGYYGIESKLTKGNQSSD 520
PTTDL +GLRKFVKWY+GYYGI+S++ K ++ ++
Sbjct: 422 PTTDLPTGLRKFVKWYVGYYGIQSRVRKESEKNN 455