BLASTX nr result

ID: Coptis24_contig00008333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008333
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1...   127   2e-29
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote...   126   4e-29
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]   126   4e-29
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-28
ref|XP_003533908.1| PREDICTED: carbon catabolite repressor prote...   121   2e-28

>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
           unknown [Populus trichocarpa]
           gi|222867975|gb|EEF05106.1| predicted protein [Populus
           trichocarpa]
          Length = 603

 Score =  127 bits (320), Expect(2) = 2e-29
 Identities = 59/74 (79%), Positives = 64/74 (86%)
 Frame = +3

Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434
           H  +   YRIQSD KVAICSVHPSEQATLQCLGCVKAK+ VAKSYHCSP+ F DAWQHHR
Sbjct: 47  HFLRYKWYRIQSDRKVAICSVHPSEQATLQCLGCVKAKLPVAKSYHCSPKCFSDAWQHHR 106

Query: 435 TLHERAASAVNENG 476
            LH+RAASA+NENG
Sbjct: 107 VLHDRAASAINENG 120



 Score = 26.6 bits (57), Expect(2) = 2e-29
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 494 FGRFNTYGSGASNASL 541
           FGRFN+ GSG  N SL
Sbjct: 127 FGRFNSSGSGVMNTSL 142


>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
           vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
           product [Vitis vinifera]
          Length = 603

 Score =  126 bits (317), Expect(2) = 4e-29
 Identities = 59/74 (79%), Positives = 63/74 (85%)
 Frame = +3

Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434
           H  +   YRIQSD KVA+CSVHPSE ATLQCLGCVKAKI VAKSYHCSP+ F DAWQHHR
Sbjct: 47  HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106

Query: 435 TLHERAASAVNENG 476
            LH+RAASAVNENG
Sbjct: 107 VLHDRAASAVNENG 120



 Score = 26.6 bits (57), Expect(2) = 4e-29
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 494 FGRFNTYGSGASNASL 541
           FGRFN+ GSG+ N SL
Sbjct: 127 FGRFNSTGSGSINTSL 142


>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
          Length = 603

 Score =  126 bits (317), Expect(2) = 4e-29
 Identities = 59/74 (79%), Positives = 63/74 (85%)
 Frame = +3

Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434
           H  +   YRIQSD KVA+CSVHPSE ATLQCLGCVKAKI VAKSYHCSP+ F DAWQHHR
Sbjct: 47  HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106

Query: 435 TLHERAASAVNENG 476
            LH+RAASAVNENG
Sbjct: 107 VLHDRAASAVNENG 120



 Score = 26.6 bits (57), Expect(2) = 4e-29
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 494 FGRFNTYGSGASNASL 541
           FGRFN+ GSG+ N SL
Sbjct: 127 FGRFNSTGSGSINTSL 142


>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  125 bits (315), Expect(2) = 2e-28
 Identities = 58/74 (78%), Positives = 63/74 (85%)
 Frame = +3

Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434
           H  +   YRIQSD KVA+CSVHPSE ATLQC+GCVKAKI VAKSYHCSP+ F DAWQHHR
Sbjct: 47  HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCIGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106

Query: 435 TLHERAASAVNENG 476
            LH+RAASAVNENG
Sbjct: 107 VLHDRAASAVNENG 120



 Score = 25.0 bits (53), Expect(2) = 2e-28
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 494 FGRFNTYGSGASNASL 541
           FGR+N+ GSG  N SL
Sbjct: 127 FGRYNSSGSGVLNTSL 142


>ref|XP_003533908.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like
           [Glycine max]
          Length = 600

 Score =  121 bits (304), Expect(2) = 2e-28
 Identities = 54/74 (72%), Positives = 63/74 (85%)
 Frame = +3

Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434
           H  +   YR+QSD KVA+CS+HPSEQATLQCLGCVKAKI V+KSYHC+ + F DAWQHHR
Sbjct: 47  HFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTTKCFSDAWQHHR 106

Query: 435 TLHERAASAVNENG 476
            LH+RAASA+NENG
Sbjct: 107 VLHDRAASALNENG 120



 Score = 29.3 bits (64), Expect(2) = 2e-28
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = +2

Query: 494 FGRFNTYGSGASNASL 541
           FGRFN+ GSGA+N+SL
Sbjct: 127 FGRFNSTGSGATNSSL 142


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