BLASTX nr result
ID: Coptis24_contig00008333
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008333 (543 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1... 127 2e-29 ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote... 126 4e-29 emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] 126 4e-29 ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2... 125 2e-28 ref|XP_003533908.1| PREDICTED: carbon catabolite repressor prote... 121 2e-28 >ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1| unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1| predicted protein [Populus trichocarpa] Length = 603 Score = 127 bits (320), Expect(2) = 2e-29 Identities = 59/74 (79%), Positives = 64/74 (86%) Frame = +3 Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434 H + YRIQSD KVAICSVHPSEQATLQCLGCVKAK+ VAKSYHCSP+ F DAWQHHR Sbjct: 47 HFLRYKWYRIQSDRKVAICSVHPSEQATLQCLGCVKAKLPVAKSYHCSPKCFSDAWQHHR 106 Query: 435 TLHERAASAVNENG 476 LH+RAASA+NENG Sbjct: 107 VLHDRAASAINENG 120 Score = 26.6 bits (57), Expect(2) = 2e-29 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = +2 Query: 494 FGRFNTYGSGASNASL 541 FGRFN+ GSG N SL Sbjct: 127 FGRFNSSGSGVMNTSL 142 >ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis vinifera] gi|297739794|emb|CBI29976.3| unnamed protein product [Vitis vinifera] Length = 603 Score = 126 bits (317), Expect(2) = 4e-29 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +3 Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434 H + YRIQSD KVA+CSVHPSE ATLQCLGCVKAKI VAKSYHCSP+ F DAWQHHR Sbjct: 47 HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106 Query: 435 TLHERAASAVNENG 476 LH+RAASAVNENG Sbjct: 107 VLHDRAASAVNENG 120 Score = 26.6 bits (57), Expect(2) = 4e-29 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 494 FGRFNTYGSGASNASL 541 FGRFN+ GSG+ N SL Sbjct: 127 FGRFNSTGSGSINTSL 142 >emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] Length = 603 Score = 126 bits (317), Expect(2) = 4e-29 Identities = 59/74 (79%), Positives = 63/74 (85%) Frame = +3 Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434 H + YRIQSD KVA+CSVHPSE ATLQCLGCVKAKI VAKSYHCSP+ F DAWQHHR Sbjct: 47 HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106 Query: 435 TLHERAASAVNENG 476 LH+RAASAVNENG Sbjct: 107 VLHDRAASAVNENG 120 Score = 26.6 bits (57), Expect(2) = 4e-29 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 494 FGRFNTYGSGASNASL 541 FGRFN+ GSG+ N SL Sbjct: 127 FGRFNSTGSGSINTSL 142 >ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1| predicted protein [Populus trichocarpa] Length = 602 Score = 125 bits (315), Expect(2) = 2e-28 Identities = 58/74 (78%), Positives = 63/74 (85%) Frame = +3 Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434 H + YRIQSD KVA+CSVHPSE ATLQC+GCVKAKI VAKSYHCSP+ F DAWQHHR Sbjct: 47 HFLRYKWYRIQSDRKVAVCSVHPSEHATLQCIGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106 Query: 435 TLHERAASAVNENG 476 LH+RAASAVNENG Sbjct: 107 VLHDRAASAVNENG 120 Score = 25.0 bits (53), Expect(2) = 2e-28 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 494 FGRFNTYGSGASNASL 541 FGR+N+ GSG N SL Sbjct: 127 FGRYNSSGSGVLNTSL 142 >ref|XP_003533908.1| PREDICTED: carbon catabolite repressor protein 4 homolog 2-like [Glycine max] Length = 600 Score = 121 bits (304), Expect(2) = 2e-28 Identities = 54/74 (72%), Positives = 63/74 (85%) Frame = +3 Query: 255 HDFKKNRYRIQSDPKVAICSVHPSEQATLQCLGCVKAKIHVAKSYHCSPR*FLDAWQHHR 434 H + YR+QSD KVA+CS+HPSEQATLQCLGCVKAKI V+KSYHC+ + F DAWQHHR Sbjct: 47 HFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTTKCFSDAWQHHR 106 Query: 435 TLHERAASAVNENG 476 LH+RAASA+NENG Sbjct: 107 VLHDRAASALNENG 120 Score = 29.3 bits (64), Expect(2) = 2e-28 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = +2 Query: 494 FGRFNTYGSGASNASL 541 FGRFN+ GSGA+N+SL Sbjct: 127 FGRFNSTGSGATNSSL 142