BLASTX nr result

ID: Coptis24_contig00008325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008325
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267002.1| PREDICTED: probable ADP-ribosylation factor ...   288   8e-76
ref|XP_003517238.1| PREDICTED: probable ADP-ribosylation factor ...   288   1e-75
ref|XP_004160147.1| PREDICTED: probable ADP-ribosylation factor ...   287   2e-75
ref|NP_001237143.1| uncharacterized protein LOC100305563 [Glycin...   286   3e-75
ref|XP_004143511.1| PREDICTED: probable ADP-ribosylation factor ...   285   5e-75

>ref|XP_002267002.1| PREDICTED: probable ADP-ribosylation factor At2g18390 [Vitis
           vinifera] gi|147792210|emb|CAN72979.1| hypothetical
           protein VITISV_009030 [Vitis vinifera]
           gi|297735152|emb|CBI17514.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  288 bits (737), Expect = 8e-76
 Identities = 144/185 (77%), Positives = 154/185 (83%)
 Frame = +3

Query: 66  MGLLSXXXXXXXXXXXXXXLMVGLDNSGKTTIVLRINGEDTSVISPTLGFNIRTINYQEY 245
           MGLLS              LMVGLDNSGKTTIVL+INGEDTSVISPTLGFNI+TI Y +Y
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYHKY 60

Query: 246 MLNIWDVGGQKTIRSYWRNYFEETDGLVWVVDSSDIRRLIDCXXXXXXXXXXXRLSGASL 425
            LNIWDVGGQ+TIRSYWRNYFE+TDGLVWVVDSSD+RRL DC           RLSGASL
Sbjct: 61  TLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASL 120

Query: 426 LILANKQDINGALKPAEIARVLNLDAMDKTRHWEIVGCSAYTGEGLMEGFDWLVQDIASR 605
           LILANKQDINGAL PAEIA+VLNL+AMDKTRHW+IVGCSA TGEGL+EGFDWLVQDIASR
Sbjct: 121 LILANKQDINGALTPAEIAKVLNLEAMDKTRHWKIVGCSAITGEGLLEGFDWLVQDIASR 180

Query: 606 IYVLD 620
           IYVLD
Sbjct: 181 IYVLD 185


>ref|XP_003517238.1| PREDICTED: probable ADP-ribosylation factor At2g18390-like [Glycine
           max]
          Length = 185

 Score =  288 bits (736), Expect = 1e-75
 Identities = 143/185 (77%), Positives = 154/185 (83%)
 Frame = +3

Query: 66  MGLLSXXXXXXXXXXXXXXLMVGLDNSGKTTIVLRINGEDTSVISPTLGFNIRTINYQEY 245
           MGLLS              LMVGLDNSGKTTIVL+INGEDTSVISPTLGFNI+TI YQ+Y
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 246 MLNIWDVGGQKTIRSYWRNYFEETDGLVWVVDSSDIRRLIDCXXXXXXXXXXXRLSGASL 425
            LNIWDVGGQKTIRSYWRNYFE+TDGLVWVVDSSD+RRL DC           RLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKFELDNLLKEERLSGASL 120

Query: 426 LILANKQDINGALKPAEIARVLNLDAMDKTRHWEIVGCSAYTGEGLMEGFDWLVQDIASR 605
           LILANKQDI GAL P EIA+VLNL+AMDK+RHW+IVGCSAYTGEGL+EGFDWLVQDIASR
Sbjct: 121 LILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSAYTGEGLLEGFDWLVQDIASR 180

Query: 606 IYVLD 620
           IY+LD
Sbjct: 181 IYMLD 185


>ref|XP_004160147.1| PREDICTED: probable ADP-ribosylation factor At2g18390-like [Cucumis
           sativus]
          Length = 185

 Score =  287 bits (734), Expect = 2e-75
 Identities = 143/185 (77%), Positives = 153/185 (82%)
 Frame = +3

Query: 66  MGLLSXXXXXXXXXXXXXXLMVGLDNSGKTTIVLRINGEDTSVISPTLGFNIRTINYQEY 245
           MGLLS              LMVGLDNSGKTTIVL+INGEDTSVISPTLGFNI+TI Y +Y
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60

Query: 246 MLNIWDVGGQKTIRSYWRNYFEETDGLVWVVDSSDIRRLIDCXXXXXXXXXXXRLSGASL 425
            LNIWDVGGQKTIRSYWRNYFE+TDGLVWVVDSSD+RRL DC           RLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKSELDNLLKEERLSGASL 120

Query: 426 LILANKQDINGALKPAEIARVLNLDAMDKTRHWEIVGCSAYTGEGLMEGFDWLVQDIASR 605
           LILANKQDI GAL P EIA+VLNL+AMDKTRHW+IVGCSAYTGEGL+EGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180

Query: 606 IYVLD 620
           IYVLD
Sbjct: 181 IYVLD 185


>ref|NP_001237143.1| uncharacterized protein LOC100305563 [Glycine max]
           gi|255625923|gb|ACU13306.1| unknown [Glycine max]
          Length = 185

 Score =  286 bits (732), Expect = 3e-75
 Identities = 142/185 (76%), Positives = 153/185 (82%)
 Frame = +3

Query: 66  MGLLSXXXXXXXXXXXXXXLMVGLDNSGKTTIVLRINGEDTSVISPTLGFNIRTINYQEY 245
           MGLLS              LMVGLDNSGKTTIVL+INGEDTSVISPTLGFNI+TI YQ+Y
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKY 60

Query: 246 MLNIWDVGGQKTIRSYWRNYFEETDGLVWVVDSSDIRRLIDCXXXXXXXXXXXRLSGASL 425
            LNIWDVGGQKTIRSYWRNYFE+TDGLVWVVDSSD+RRL DC           RLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKFELDNLLKEERLSGASL 120

Query: 426 LILANKQDINGALKPAEIARVLNLDAMDKTRHWEIVGCSAYTGEGLMEGFDWLVQDIASR 605
           LILANKQDI GAL P EIA+VLNL+AMDK+RHW+IVGCS YTGEGL+EGFDWLVQDIASR
Sbjct: 121 LILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSTYTGEGLLEGFDWLVQDIASR 180

Query: 606 IYVLD 620
           IY+LD
Sbjct: 181 IYMLD 185


>ref|XP_004143511.1| PREDICTED: probable ADP-ribosylation factor At2g18390-like [Cucumis
           sativus]
          Length = 185

 Score =  285 bits (730), Expect = 5e-75
 Identities = 142/185 (76%), Positives = 153/185 (82%)
 Frame = +3

Query: 66  MGLLSXXXXXXXXXXXXXXLMVGLDNSGKTTIVLRINGEDTSVISPTLGFNIRTINYQEY 245
           MGLLS              LMVGLDNSGKTTIVL+INGEDTSVISPTLGFNI+TI Y +Y
Sbjct: 1   MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYHKY 60

Query: 246 MLNIWDVGGQKTIRSYWRNYFEETDGLVWVVDSSDIRRLIDCXXXXXXXXXXXRLSGASL 425
            LNIWDVGGQKTIRSYWRNYFE+TDGLVWVVDSS++RRL DC           RLSGASL
Sbjct: 61  TLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSELRRLDDCKSELDNLLKEERLSGASL 120

Query: 426 LILANKQDINGALKPAEIARVLNLDAMDKTRHWEIVGCSAYTGEGLMEGFDWLVQDIASR 605
           LILANKQDI GAL P EIA+VLNL+AMDKTRHW+IVGCSAYTGEGL+EGFDWLVQD+ASR
Sbjct: 121 LILANKQDIKGALSPEEIAKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDVASR 180

Query: 606 IYVLD 620
           IYVLD
Sbjct: 181 IYVLD 185


Top