BLASTX nr result

ID: Coptis24_contig00008322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008322
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   104   7e-21
ref|XP_004158245.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   103   2e-20
ref|XP_004144168.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 prot...   103   2e-20
ref|XP_003517837.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   101   7e-20
ref|XP_002512080.1| conserved hypothetical protein [Ricinus comm...   101   7e-20

>ref|XP_002274189.1| PREDICTED: UPF0420 protein C16orf58 homolog [Vitis vinifera]
           gi|297738087|emb|CBI27288.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/65 (73%), Positives = 59/65 (90%)
 Frame = +2

Query: 5   ITMGHLLSIWVSFLSLTVFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQVLSPQQV 184
           ITMGH ++IW SFLSLT+FHMYANYRAV CL LTTLN+ER  IL++HFM++GQVLSPQ+V
Sbjct: 230 ITMGHSVAIWFSFLSLTMFHMYANYRAVRCLILTTLNSERSSILIEHFMETGQVLSPQEV 289

Query: 185 SEVEH 199
           S++EH
Sbjct: 290 SKMEH 294


>ref|XP_004158245.1| PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis sativus]
          Length = 435

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/65 (72%), Positives = 58/65 (89%)
 Frame = +2

Query: 5   ITMGHLLSIWVSFLSLTVFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQVLSPQQV 184
           ITMG  L+IW+SFLSLT+FHMYANY+AVCCLSLT+LN +RC I LQH++Q+ +VLSPQQV
Sbjct: 231 ITMGCPLAIWLSFLSLTMFHMYANYKAVCCLSLTSLNPQRCSIALQHYIQTAEVLSPQQV 290

Query: 185 SEVEH 199
           S +EH
Sbjct: 291 SMMEH 295


>ref|XP_004144168.1| PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58 homolog
           [Cucumis sativus]
          Length = 437

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/65 (72%), Positives = 58/65 (89%)
 Frame = +2

Query: 5   ITMGHLLSIWVSFLSLTVFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQVLSPQQV 184
           ITMG  L+IW+SFLSLT+FHMYANY+AVCCLSLT+LN +RC I LQH++Q+ +VLSPQQV
Sbjct: 230 ITMGCPLAIWLSFLSLTMFHMYANYKAVCCLSLTSLNPQRCSIALQHYIQTAEVLSPQQV 289

Query: 185 SEVEH 199
           S +EH
Sbjct: 290 SMMEH 294


>ref|XP_003517837.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max]
          Length = 473

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/65 (73%), Positives = 56/65 (86%)
 Frame = +2

Query: 5   ITMGHLLSIWVSFLSLTVFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQVLSPQQV 184
           +T+GH L+IW SFLSLTVFHMYANYRAV CL+L +LN ER  ILLQHFM++GQVLSP+QV
Sbjct: 267 LTIGHPLAIWFSFLSLTVFHMYANYRAVRCLALNSLNPERSSILLQHFMETGQVLSPKQV 326

Query: 185 SEVEH 199
           S  EH
Sbjct: 327 SSQEH 331


>ref|XP_002512080.1| conserved hypothetical protein [Ricinus communis]
           gi|223549260|gb|EEF50749.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/65 (73%), Positives = 57/65 (87%)
 Frame = +2

Query: 5   ITMGHLLSIWVSFLSLTVFHMYANYRAVCCLSLTTLNAERCLILLQHFMQSGQVLSPQQV 184
           IT+GH L+IW SFLSLT+FHMYANYRAV CL LT+LN +R  ILLQHFM++GQVLSP+QV
Sbjct: 174 ITIGHPLAIWFSFLSLTMFHMYANYRAVRCLVLTSLNMQRSSILLQHFMETGQVLSPEQV 233

Query: 185 SEVEH 199
           S +EH
Sbjct: 234 SGMEH 238


Top