BLASTX nr result

ID: Coptis24_contig00008303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008303
         (1650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262606.1| PREDICTED: probable ADP-ribosylation factor ...   566   e-159
ref|XP_002322896.1| predicted protein [Populus trichocarpa] gi|2...   542   e-152
ref|XP_002309050.1| predicted protein [Populus trichocarpa] gi|2...   537   e-150
ref|XP_004167174.1| PREDICTED: probable ADP-ribosylation factor ...   531   e-148
ref|XP_002527750.1| arf gtpase-activating protein, putative [Ric...   530   e-148

>ref|XP_002262606.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD6 [Vitis vinifera]
          Length = 465

 Score =  566 bits (1459), Expect = e-159
 Identities = 299/471 (63%), Positives = 343/471 (72%), Gaps = 25/471 (5%)
 Frame = -1

Query: 1563 MAASRRLRDLQSQAGNKTCVDCSQKNPQWASVTYGIFMCLECSGKHRGLGVHISFVRSVT 1384
            MAASRRLRDLQSQ  NK CVDCSQKNPQWASV+YGIFMCLECSGKHRGLGVHISFVRSVT
Sbjct: 1    MAASRRLRDLQSQPANKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVT 60

Query: 1383 MDSWSEIQLKKMEAGGNEKLNSFLSSYGISKETDIISKYNSNAASIYKDRIQSLAEGKSW 1204
            MDSWSEIQ+KKME+GGNE+LNSFL+ YGI KETDI++KYN+ AASIY+DRIQ+LAEG+ W
Sbjct: 61   MDSWSEIQVKKMESGGNERLNSFLAQYGIKKETDIVTKYNTKAASIYRDRIQALAEGRPW 120

Query: 1203 RDPVVVKE---IGIKKPPLS--------SGGSRNTSNWDNWD-DDGNRSGDNVRRNQSTG 1060
            RDP VVKE    G  KPPL          GG  +   WD+WD DDG RS D +RRNQSTG
Sbjct: 121  RDPPVVKETIGAGKSKPPLGQSAGNGGRDGGFGDNGGWDSWDNDDGFRSTD-MRRNQSTG 179

Query: 1059 DF---XXXXXXXXXXXXXSTEDMYTRSKMEESAANKESYFARKMVENESKPVGIPPSQGG 889
            D                 STEDMYTR+++E SAANK  +FARK+ ENES+P GIPPSQGG
Sbjct: 180  DVRGGSGSGGRGFPARSRSTEDMYTRTELEASAANKGDFFARKLAENESRPEGIPPSQGG 239

Query: 888  KYVGFGSTPXXXXXXXXXXXXXGDVLKDTVSVFSQGFGR----XXXXXXXXXXXXXAGTK 721
            KYVGFGSTP             GDVLKDTVSV SQG GR                 AGTK
Sbjct: 240  KYVGFGSTP-----PPPQMNAQGDVLKDTVSVVSQGLGRLTLVATSAAQSAANAVQAGTK 294

Query: 720  DLTAKVKEGGYDYXXXXXXXXXXXXXXEIGHKTWGIMKGVMAMASQKVEEYTKEGINWNG 541
            +L++KV++GGYDY              EIGHKTWGIMKGVMAMASQKVEEY K+G+ WN 
Sbjct: 295  ELSSKVRDGGYDYKVNETVNVVTTKTTEIGHKTWGIMKGVMAMASQKVEEYAKDGMKWNS 354

Query: 540  DNWQRDDSEKNGYYQDFGQENKGWNSF--GGQSSSGRHNN---TSSWEDWDSQDNQKEQS 376
            D WQR+D+EKNG+YQ+FGQ++KGWNS   GGQ SSG H N   +SSW+DWD +DN+KE S
Sbjct: 355  DGWQRNDNEKNGFYQEFGQQSKGWNSSSEGGQPSSGGHVNSVSSSSWDDWDQKDNKKEDS 414

Query: 375  VKSSAAPKGDSWAGWDDAKDDGYDNFYHSSSNNIAAGPNGK-DSRWTDGGF 226
             K  A+  GD+WAGWDDAKDDGY+NFY S+S+  A G NGK D+ WT+GGF
Sbjct: 415  TK-GASHNGDNWAGWDDAKDDGYENFYQSASDKKAVGRNGKSDTMWTEGGF 464


>ref|XP_002322896.1| predicted protein [Populus trichocarpa] gi|222867526|gb|EEF04657.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  542 bits (1397), Expect = e-152
 Identities = 292/479 (60%), Positives = 339/479 (70%), Gaps = 33/479 (6%)
 Frame = -1

Query: 1563 MAASRRLRDLQSQAGNKTCVDCSQKNPQWASVTYGIFMCLECSGKHRGLGVHISFVRSVT 1384
            MAASRRLR+LQSQ  NK CVDCSQKNPQWASV+YG+FMCLECSGKHRGLGVHISFVRSVT
Sbjct: 1    MAASRRLRELQSQPANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVT 60

Query: 1383 MDSWSEIQLKKMEAGGNEKLNSFLSSYGISKETDIISKYNSNAASIYKDRIQSLAEGKSW 1204
            MDSWSEIQ+K+ME+GGN+KLN+FL+ YGI KETDI++KY++NAASIY+DRIQSLAEG+SW
Sbjct: 61   MDSWSEIQIKRMESGGNDKLNAFLAQYGIPKETDIVAKYSTNAASIYRDRIQSLAEGRSW 120

Query: 1203 RDPVVVKE-IGI-KKPPLSSGGS------------RNTSNWDNWDDDGN--RSGDNVRRN 1072
            RDP VVKE IG  KKPPL+  G              N   WDNWD+D +   S   VRRN
Sbjct: 121  RDPPVVKETIGSKKKPPLAQSGGGGGAACGRDGNFGNNGGWDNWDNDDSFKYSLSEVRRN 180

Query: 1071 QSTGDF-------XXXXXXXXXXXXXSTEDMYTRSKMEESAANKESYFARKMVENESKPV 913
            QS  DF                    STEDMYT+S++E SAANKES+FAR+M ENE +P 
Sbjct: 181  QSVSDFRGGDTGAGNDGMGRVPVKSRSTEDMYTKSQLEASAANKESFFARRMAENEVRPD 240

Query: 912  GIPPSQGGKYVGFGSTPXXXXXXXXXXXXXGDVLKDTVSVFSQGFGR----XXXXXXXXX 745
            GIPPS GGKYVGFGS+P                 +D +SV SQGFGR             
Sbjct: 241  GIPPSHGGKYVGFGSSPSPTQSDNKSQ-------QDVLSVVSQGFGRLSMVAASAAQSAA 293

Query: 744  XXXXAGTKDLTAKVKEGGYDYXXXXXXXXXXXXXXEIGHKTWGIMKGVMAMASQKVEEYT 565
                AGTK+LT+KVKEGGYDY              EIGH+TWGIMKGVMAMASQKVEEYT
Sbjct: 294  NVVQAGTKELTSKVKEGGYDYKMNETVNVVTAKTTEIGHRTWGIMKGVMAMASQKVEEYT 353

Query: 564  KEGINWNGDNWQRDDSEKNGYYQDFG-QENKGWN-SFGGQSSSGRHN--NTSSWEDWDSQ 397
            K+G  WN DNWQ+++S+ NGYYQ+F  QENKGWN S  GQSSSG +N  ++SSW+DWD +
Sbjct: 354  KDG--WNTDNWQQNNSQSNGYYQEFNKQENKGWNSSSSGQSSSGHYNSCSSSSWDDWDRK 411

Query: 396  DNQKEQSVKSSAAPKGDSWAGWDDAKDDGY-DNFYHSSSNNIAAGPNGK-DSRWTDGGF 226
            DN+KE SVKS+A    D WAGWDDAKDDGY DNFYHS+ +  +A  NGK D+ WT GGF
Sbjct: 412  DNRKEDSVKSTALHSNDGWAGWDDAKDDGYDDNFYHSAPDKKSASHNGKSDASWTGGGF 470


>ref|XP_002309050.1| predicted protein [Populus trichocarpa] gi|222855026|gb|EEE92573.1|
            predicted protein [Populus trichocarpa]
          Length = 471

 Score =  537 bits (1383), Expect = e-150
 Identities = 287/479 (59%), Positives = 339/479 (70%), Gaps = 33/479 (6%)
 Frame = -1

Query: 1563 MAASRRLRDLQSQAGNKTCVDCSQKNPQWASVTYGIFMCLECSGKHRGLGVHISFVRSVT 1384
            MAASRRLR+LQSQ  NK CVDCSQKNPQWASV+YG+FMCLECSGKHRGLGVHISFVRSVT
Sbjct: 1    MAASRRLRELQSQPANKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVT 60

Query: 1383 MDSWSEIQLKKMEAGGNEKLNSFLSSYGISKETDIISKYNSNAASIYKDRIQSLAEGKSW 1204
            MDSWSEIQ+KKME+GGN+KLN+FL+ YGI KETDI++KYN+NAAS+Y+DRIQ+LA+G+SW
Sbjct: 61   MDSWSEIQIKKMESGGNDKLNAFLAQYGIPKETDIVAKYNTNAASVYRDRIQTLADGRSW 120

Query: 1203 RDPVVVKE-IGI-KKPPLSSGG---------SRNTSNWDNWDDDGN--RSGDNVRRNQST 1063
            RDP VVKE IG  KKPPLS  G         S N   WDNWD+D +   S  +VRRNQS 
Sbjct: 121  RDPPVVKETIGSKKKPPLSQSGSAGGGRDDYSSNNGGWDNWDNDDSLGSSSSDVRRNQSV 180

Query: 1062 GDF----------XXXXXXXXXXXXXSTEDMYTRSKMEESAANKESYFARKMVENESKPV 913
             DF                       STED+YTRS++E SAANKES+FAR+M +NES+  
Sbjct: 181  SDFRGGNTGGGGGGGGHAMGGPVRSRSTEDIYTRSQLEASAANKESFFARRMADNESRSD 240

Query: 912  GIPPSQGGKYVGFGSTPXXXXXXXXXXXXXGDVLKDTVSVFSQGFGR----XXXXXXXXX 745
             +PPSQGGKYVGFGS+P              +  +D +S  SQGFG+             
Sbjct: 241  AVPPSQGGKYVGFGSSP-------APTQRNNNSQQDVLSAVSQGFGKLSMVAASAAQSAA 293

Query: 744  XXXXAGTKDLTAKVKEGGYDYXXXXXXXXXXXXXXEIGHKTWGIMKGVMAMASQKVEEYT 565
                AGTK+LT+KVKEGGYDY              EIG +TWGIMKGVMA+ASQKVEEYT
Sbjct: 294  NVVHAGTKELTSKVKEGGYDYKVNETVNVVTAKTTEIGQRTWGIMKGVMAIASQKVEEYT 353

Query: 564  KEGINWNGDNWQRDDSEKNGYYQDFG-QENKGWN-SFGGQSSSGRHNN--TSSWEDWDSQ 397
            KEG   N DNWQ+ D++ NGYYQ+F  QENKGWN S GGQSSSG HN+  +SSW+DWD +
Sbjct: 354  KEG--RNTDNWQQSDNQSNGYYQEFNKQENKGWNSSSGGQSSSGHHNSYGSSSWDDWDQK 411

Query: 396  DNQKEQSVKSSAAPKGDSWAGWDDAKDDGY-DNFYHSSSNNIAAGPNGK-DSRWTDGGF 226
            DN+KE S+KS+A+   D WAGWDDAKDDGY DN YHS+ +  +A  NGK D+ WT GGF
Sbjct: 412  DNRKEDSIKSTASHSNDDWAGWDDAKDDGYDDNIYHSAPSTKSASHNGKSDASWTGGGF 470


>ref|XP_004167174.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD6-like [Cucumis sativus]
          Length = 471

 Score =  531 bits (1368), Expect = e-148
 Identities = 273/479 (56%), Positives = 332/479 (69%), Gaps = 33/479 (6%)
 Frame = -1

Query: 1563 MAASRRLRDLQSQAGNKTCVDCSQKNPQWASVTYGIFMCLECSGKHRGLGVHISFVRSVT 1384
            MAASRRLRDLQS+ GNK CVDCSQKNPQWASV+YG+FMCLECSGKHRGLGVHISFVRSVT
Sbjct: 1    MAASRRLRDLQSRPGNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVT 60

Query: 1383 MDSWSEIQLKKMEAGGNEKLNSFLSSYGISKETDIISKYNSNAASIYKDRIQSLAEGKSW 1204
            MDSWSEIQ+KKMEAGGNE+LN+FLS YGI KETDI++KYN++AA +Y+DRIQ+LAEG+SW
Sbjct: 61   MDSWSEIQIKKMEAGGNEQLNAFLSQYGIPKETDIVTKYNTSAAGVYRDRIQALAEGRSW 120

Query: 1203 RDPVVVKE---IGIKKPPLS----SGGSR-NTSNWDNWDDDGN-RSGDNVRRNQSTGDFX 1051
            +DP  VKE   +G  +PPL+     GGS+ N   WD+WD++ N RS  ++RRNQSTGD  
Sbjct: 121  KDPPAVKENIGVGKSRPPLAQSAGGGGSKVNNGGWDSWDNEDNFRSSSDMRRNQSTGDVR 180

Query: 1050 XXXXXXXXXXXXSTEDMYTRSKMEESAANKESYFARKMVENESKPVGIPPSQGGKYVGFG 871
                        STED+YTRS++E SAANK+++FA+K+ EN+S+P GIPPSQGGKYVGFG
Sbjct: 181  GMGGGGMPSRSRSTEDIYTRSQLEASAANKDNFFAQKIAENDSRPEGIPPSQGGKYVGFG 240

Query: 870  STPXXXXXXXXXXXXXGDVLKDTVSVFSQGFGR----XXXXXXXXXXXXXAGTKDLTAKV 703
            S+P              D   D  SV SQGFG+                 AGTK+LT KV
Sbjct: 241  SSP--------APARRNDPQNDVFSVVSQGFGKLSLVAASAAQSAANAVQAGTKELTTKV 292

Query: 702  KEGGYDYXXXXXXXXXXXXXXEIGHKTWGIMKGVMAMASQKVEEYTKEGINWNGDNWQRD 523
            KEGGYDY              EIG +TWGIM+GVMAMASQKVEEY K+G+NW  D WQR+
Sbjct: 293  KEGGYDYKVNETVNVVTAKTTEIGQRTWGIMRGVMAMASQKVEEYAKDGMNWKNDGWQRN 352

Query: 522  DSEKNGYYQDFGQENKGWNSFGG---QSSSGRHN---NTSSWEDWDSQDNQKEQSVKSSA 361
            ++EKNGYYQ+F  +NKGWNS  G    S SG HN   N+SSW+DWD++DN+KE++    +
Sbjct: 353  ENEKNGYYQEFEHDNKGWNSSSGTGQSSGSGHHNNSYNSSSWDDWDTKDNRKEETTTKVS 412

Query: 360  AP------------KGDSWAGWDDAKDDGYDNFYHSSSNNIAAGPNGK--DSRWTDGGF 226
                            D WAGWDD KDDGYD++Y +S      G NGK     W++GGF
Sbjct: 413  GTHNNNNNNNNNNNSNDGWAGWDDQKDDGYDHYYQASDRK-TVGQNGKAGGGTWSEGGF 470


>ref|XP_002527750.1| arf gtpase-activating protein, putative [Ricinus communis]
            gi|223532891|gb|EEF34663.1| arf gtpase-activating
            protein, putative [Ricinus communis]
          Length = 457

 Score =  530 bits (1364), Expect = e-148
 Identities = 287/468 (61%), Positives = 328/468 (70%), Gaps = 22/468 (4%)
 Frame = -1

Query: 1563 MAASRRLRDLQSQAGNKTCVDCSQKNPQWASVTYGIFMCLECSGKHRGLGVHISFVRSVT 1384
            MAASRRLRDLQSQ GNK CVDCSQKNPQWASV+YG+FMCLECSGKHRGLGVHISFVRSVT
Sbjct: 1    MAASRRLRDLQSQPGNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVT 60

Query: 1383 MDSWSEIQLKKMEAGGNEKLNSFLSSYGISKETDIISKYNSNAASIYKDRIQSLAEGKSW 1204
            MDSWSEIQ+KKMEAGGNEKLN+FLS YG+ KETDI++KYN+NAAS+Y+DRIQ+LAEG+ W
Sbjct: 61   MDSWSEIQIKKMEAGGNEKLNAFLSQYGVPKETDIVAKYNTNAASVYRDRIQALAEGRPW 120

Query: 1203 RDPVVVKE-IGI----KKPPLSSGGSRNTSNWDNWD-DDGNRSGDN-VRRNQSTGDF--- 1054
            RDP VVKE IG     KKPPL   G  N   WD+WD DD  RS  N +RRNQS  DF   
Sbjct: 121  RDPPVVKETIGSTSSKKKPPLGQSGG-NNGGWDSWDNDDSYRSSSNDMRRNQSVSDFRGN 179

Query: 1053 XXXXXXXXXXXXXSTEDMYTRSKMEESAANKESYFARKMVENESKPVGIPPSQGGKYVGF 874
                         STEDMYTRS++E SAANKES+FARKM EN+S+P G+PPSQGGKYVGF
Sbjct: 180  NGNGAGGMPVRSRSTEDMYTRSQLEASAANKESFFARKMAENDSRPEGLPPSQGGKYVGF 239

Query: 873  GSTPXXXXXXXXXXXXXGDVLKDTVSVFSQGFGR----XXXXXXXXXXXXXAGTKDLTAK 706
            GS P              +   D  SV SQGFGR                 A TK++T+K
Sbjct: 240  GSGP-----APSNRNINNNSQPDVFSVMSQGFGRLSLAAASAAQSAASVVQASTKEITSK 294

Query: 705  VKEGGYDYXXXXXXXXXXXXXXEIGHKTWGIMKGVMAMASQKVEEYTKEGINWNGDNWQR 526
            VKEGGYDY              EIG KTWGIMKGVMA+ASQKVEEY KEG       WQR
Sbjct: 295  VKEGGYDYKVNETVNVVTAKTTEIGQKTWGIMKGVMAIASQKVEEYAKEG------GWQR 348

Query: 525  DDSEKNGYYQDFG-QENKGWN--SFGGQSSSGRHNN---TSSWEDWDSQDNQKEQSVKSS 364
            ++SE NGYYQ+F  QENKGWN  S GGQSSS  H N   ++SW+DWD +D +KE S+K +
Sbjct: 349  NESESNGYYQEFNKQENKGWNSSSAGGQSSSSGHYNSYSSNSWDDWDQKDTRKEDSIKVT 408

Query: 363  AAPKGDSWAGWDDAKDDGY-DNFYHSSSNNIAAGPNGK-DSRWTDGGF 226
             +   D WAGWDDAKD+G+ DNFY S+ +  A G NGK D+ WT GGF
Sbjct: 409  GSHNNDGWAGWDDAKDEGFDDNFYQSAPDKKAVGHNGKSDATWTGGGF 456


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