BLASTX nr result

ID: Coptis24_contig00008300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008300
         (1881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]   266   2e-68
emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]   219   2e-54
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-53
ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-52
ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-49

>emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]
          Length = 422

 Score =  266 bits (679), Expect = 2e-68
 Identities = 180/406 (44%), Positives = 223/406 (54%), Gaps = 29/406 (7%)
 Frame = +1

Query: 661  TSLFDPLSNYFDVFXXXXXXXXXXXXXXLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXX 840
            +S+FDPLSNYFD                LNLD+VWS+ LRS+PN T++            
Sbjct: 23   SSMFDPLSNYFDPLSRSPTQLQNPNSL-LNLDMVWSKTLRSDPNCTEIGGILASSSSTPP 81

Query: 841  XXXHQDVNRVIIQTPPSSVSLPQGADTSVKASASSS-DPTNVXXXXXXXXXXXXXXPTTV 1017
                Q   R    +   S+  P   + + +A+AS+S D TNV              PTTV
Sbjct: 82   FSGAQGQIRATFPSSLPSMPFPPAPENAARATASASNDQTNVARNPKKRSRASRRAPTTV 141

Query: 1018 LTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXXLDLFSTASTMRSGHLEPNRPPPYLLRPF 1197
            LTTDT+NFRAMVQEFTGI              LDLF TASTMRSGHL+ + PP YLLRPF
Sbjct: 142  LTTDTTNFRAMVQEFTGIPAQPFTSSPFPRSRLDLFGTASTMRSGHLD-HAPPSYLLRPF 200

Query: 1198 AQK--PSPFAS-----------SNMSPGIAXXXXXXXXXXXXXXXXXXX--YQLLSELGL 1332
            AQK  P PFAS           S+M   IA                     YQL S+LGL
Sbjct: 201  AQKLQPPPFASPPPSSSSSFSSSSMVDAIASTTNITSGSASNTSSNSTSINYQLPSDLGL 260

Query: 1333 SKQSQNLVNM--QNPLLTFQSLLQSTIPPKYPSPNSSGFGDNSQGIL------SNTRMGT 1488
             KQ QNL+NM  QNP+L+ QS LQ+  P KYP PNS+  G   QG L      S+ +MG 
Sbjct: 261  VKQPQNLLNMNVQNPILSIQSFLQT--PLKYPHPNSAIMGSKPQGSLEIPSTDSHIKMGG 318

Query: 1489 LDEFNMNHGQVRTHLNELPNFGTSD--GMRNDNNFASNCGDGVGSNDGDQGQARSFNENY 1662
            L++F ++HG V THL+ LPN  +SD    R+DNN  S   DG+GS+ G+ GQ    N NY
Sbjct: 319  LEDFGLSHGHVNTHLSGLPNLVSSDRTASRSDNNPPS-WNDGLGSSGGNHGQLGPLNGNY 377

Query: 1663 GNSQRANSCKLNFSGSSSH---EKGTENVTSRGGEGMVDSWICSSD 1791
             NSQR  + K+N+S SSS    +K  ENV++R  EGMV+SWICSSD
Sbjct: 378  NNSQRVTNGKMNYSASSSDFHGDKVPENVSTR-SEGMVESWICSSD 422


>emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]
          Length = 449

 Score =  219 bits (559), Expect = 2e-54
 Identities = 175/460 (38%), Positives = 215/460 (46%), Gaps = 36/460 (7%)
 Frame = +1

Query: 520  DDEYDSRNESISAFLNPSSSSHXXXXXXXXXXXXXXXXXXXXXXXXXTSLFDPLSNYFDV 699
            D+EY+SR ESI AFLNPS                              +LFDP SNY D 
Sbjct: 16   DEEYESRPESIPAFLNPSGH-------FGSVSSNPQPPPFPHHQNHPPTLFDPRSNYVDA 68

Query: 700  FXXXXXXXXXXXXXXLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXXHQDVNRVIIQ 879
            F              LNLD VWSR LRSEPN TD                   +    +Q
Sbjct: 69   FSQSSANPNANSL--LNLDTVWSRGLRSEPNCTDFGNLTGLSSSSTSSSGQSMLG---VQ 123

Query: 880  TPPSSVSLPQGADTSVKASASS--SDPTNVXXXXXXXXXXXXXXPTTVLTTDTSNFRAMV 1053
             P          +   +AS++S  SD TNV              PTTVLTTDTSNFRAMV
Sbjct: 124  GPVH--------ENGGRASSASLPSDQTNVVRSSKKRTRASRRAPTTVLTTDTSNFRAMV 175

Query: 1054 QEFTGIXXXXXXXXXXXXXXLDLFSTASTMRSGHLEPNRPPPYLLRPFAQKPSP--FASS 1227
            QEFTGI              LDLF   S+++ GHLEP   P Y LRP   K  P  F SS
Sbjct: 176  QEFTGIPAPPFSASPYSRR-LDLFGAGSSIKPGHLEP-LGPLYPLRPSPHKVQPNLFVSS 233

Query: 1228 NMSPGIAXXXXXXXXXXXXXXXXXXX-----------------------YQLLSELGLSK 1338
            + SP  +                                          YQL S+ G  K
Sbjct: 234  SSSPSPSFFNSTIGDSIVSTTNIATTSTNNIITTSMAAATNAINSGSNTYQLPSDPGFPK 293

Query: 1339 QSQNLVNMQNPLLTFQSLLQS--TIPPKYPSPNSSGFGDNSQGILSNTRMGTLDEFNMNH 1512
            Q QN++ MQNP+L+FQSLLQS  + P KYP  +   FG  S   L+   + + +E  + H
Sbjct: 294  QPQNVLGMQNPILSFQSLLQSPPSHPLKYPLADVPVFGTKSPASLT-LPLPSFEELGVPH 352

Query: 1513 GQVRTHLNELPNFGTSDG---MRNDNNFASNCG-DGVGSNDGDQGQARSFNENYGNSQRA 1680
            G V  +++ LP+  TS G   +R D+N    C  DG GSN+G + Q R FN NYG+S + 
Sbjct: 353  GHVNANISGLPSHATSGGSRRLRTDDN--GTCWRDGAGSNEGSREQLRPFNGNYGDSPQV 410

Query: 1681 NSCKLNFSGSSS---HEKGTENVTSRGGEGMVDSWICSSD 1791
            +S KLN S SSS    EKG++NV+SR GEG VDSWIC SD
Sbjct: 411  SSFKLNCSASSSAFHPEKGSDNVSSR-GEGTVDSWICPSD 449


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  215 bits (548), Expect = 3e-53
 Identities = 186/496 (37%), Positives = 226/496 (45%), Gaps = 76/496 (15%)
 Frame = +1

Query: 520  DDEYDSRNESISAFLN----PSSSSHXXXXXXXXXXXXXXXXXXXXXXXXXTSLFDPLSN 687
            D+EYDSR ESISAFLN    P S                            T LFDPLSN
Sbjct: 16   DEEYDSRAESISAFLNNNNNPLSHVGPMSSNPPPQPEHHHHHQTHHSSSSSTMLFDPLSN 75

Query: 688  YFDVFXXXXXXXXXXXXXX----LNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXXHQ 855
            YFD                    LNLD+VWS+NLRSEPN TD+               +Q
Sbjct: 76   YFDPLSSASSRSPPPPFTNPNSLLNLDMVWSKNLRSEPNCTDLGGFISSSSPTQQLFTNQ 135

Query: 856  DVNRVIIQTPPSSVSLPQGADTSVKASASSSDP----TNVXXXXXXXXXXXXXXPTTVLT 1023
               R   Q+ P     P G +++ +   S ++     T                PTTVLT
Sbjct: 136  TQTRTTFQSLP-----PHGHESATRGPVSGTNDQVSNTAGVRNPKKRSRASRRAPTTVLT 190

Query: 1024 TDTSNFRAMVQEFTGIXXXXXXXXXXXXXXLDLFST-ASTMRSG---HLEPNRPPPYLLR 1191
            TDT+NFRAMVQEFTGI              LDLF T AST+RS    HL+P+ PPPYLLR
Sbjct: 191  TDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSHHLDPS-PPPYLLR 249

Query: 1192 PFAQK-------PSPFASS---------NMSPGIA---------XXXXXXXXXXXXXXXX 1296
            PFAQ+         PFASS         +M   IA                         
Sbjct: 250  PFAQRFQPPPPPAPPFASSGSTASSFSTSMVDAIASTTTTNINNSGACTNSTTTSNISST 309

Query: 1297 XXXYQLLSELGLSKQSQNL--VNMQNPLLTFQSLLQSTIPPKYPSPNSS---GFGDNSQG 1461
               YQL S+LGL KQ  +L  +N+QNP+L F  L Q+  P KYP PNS+   G     QG
Sbjct: 310  SINYQLPSDLGLLKQPHHLLNINVQNPILNFHPLFQA--PHKYPLPNSTNILGTTKAQQG 367

Query: 1462 IL-------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDG--------MR--NDNNFA 1590
                     S+ +MG L+EF M+HG V T+L  L N  +S          MR  + NN  
Sbjct: 368  SSLEIPSNDSHLKMGVLEEFGMSHGHVSTNLTGLQNIVSSSSSPSADATLMRRGDHNNNL 427

Query: 1591 SNCGDGVGSNDG-------DQGQARSFNENYGNS-QRANSCKLNFSGSSSHE-----KGT 1731
            +N GDGVGSN+G        QG  RS N NY NS QR  + K+NF  SSS +     KG 
Sbjct: 428  ANWGDGVGSNEGGHHHHQQQQGLLRSINGNYNNSTQRVTNGKVNFLASSSSDFRGDNKGQ 487

Query: 1732 ENVTSRGGEGMVDSWI 1779
            ENV +R  E + D+ I
Sbjct: 488  ENVATRSEEVVNDNEI 503


>ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|222856542|gb|EEE94089.1|
            predicted protein [Populus trichocarpa]
          Length = 510

 Score =  213 bits (542), Expect = 1e-52
 Identities = 188/503 (37%), Positives = 229/503 (45%), Gaps = 79/503 (15%)
 Frame = +1

Query: 520  DDEYDS-RNESISAFLNPSSSSHXXXXXXXXXXXXXXXXXXXXXXXXX------TSLFDP 678
            D+EYDS R ESISAFLN +++ +                               T  FDP
Sbjct: 16   DEEYDSSRAESISAFLNSNNNKNNPFSHVGPMPHNQPPEPDHHHHQSHHSSSSSTMFFDP 75

Query: 679  LSNYFDVFXXXXXXXXXXXXXXLN------LDVVWSRNLRSEPNSTDMXXXXXXXXXXXX 840
             SNYFD                 N      LD+VWS+NLRS+PN TD+            
Sbjct: 76   FSNYFDPLAPSSSSSRSPLQSLTNPNSLNNLDMVWSKNLRSDPNCTDLGGFISSSLPTQQ 135

Query: 841  XXXHQDVNRVIIQTPPSSVSLPQGADTSVKASASSSDP------TNVXXXXXXXXXXXXX 1002
               +Q  NR   Q+ PS     Q + T V  S S S        T               
Sbjct: 136  FT-NQTQNRTTFQSLPSH---GQESATRVPGSGSVSGTNDQVSNTAGIRNPKKRSRASRR 191

Query: 1003 XPTTVLTTDTSNFRAMVQEFTGIXXXXXXXXXXXXXXLDLFSTA-STMRSG---HLEPNR 1170
             PTTVL+TDT+NFRAMVQEFTGI              LDLF TA ST+RS    HL+P+ 
Sbjct: 192  APTTVLSTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSQHLDPS- 250

Query: 1171 PPPYLLRPFAQK-----PSPFASS---------NMSPGIAXXXXXXXXXXXXXXXXXXX- 1305
            PPPYLL PFA+K     P PF SS         +M   IA                    
Sbjct: 251  PPPYLLGPFAKKFQPPPPPPFVSSGSAASSFSASMVDAIASTTATNINGTCTNTTISNNI 310

Query: 1306 ------YQLLSELGLSKQSQNLVNM--QNPLLTFQSLLQSTIPPKYP---SPNSSGFGDN 1452
                  YQL S+LGL KQ  NL+N+  QNP+L F  LLQ+  PPKYP   SPN  G    
Sbjct: 311  PLTSINYQLPSDLGLLKQPHNLLNLNVQNPILNFHPLLQA--PPKYPLPDSPNILGTTKP 368

Query: 1453 SQGIL------SNTRMGTLDEFNMNHGQVRTHLNELPNFGTSDGMRND---------NNF 1587
             QG L      S+ +M  L+EF +NHG V T+L+ L N  +S     D         +N 
Sbjct: 369  QQGSLEIPLNVSHLKMVVLEEFGLNHGHVNTNLSGLQNIVSSSSPSADVTLVRRSDHSNS 428

Query: 1588 ASNCGDGVGSNDGD---------QGQARSFNENYGNS-QRANSCKLNFSGSSS-----HE 1722
             +N GDG GSN+ D         QG  RS N +Y NS QR  + K+NF  SSS     H+
Sbjct: 429  LTNWGDGAGSNEVDHHHHQQQQQQGLLRSINGDYNNSTQRVTNGKVNFLASSSDFCGDHK 488

Query: 1723 KGTENVTSRGGEGMVDSWICSSD 1791
             G ENV +R  EG ++SWICSSD
Sbjct: 489  LGQENVATR-SEGTMESWICSSD 510


>ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|222842771|gb|EEE80318.1|
            predicted protein [Populus trichocarpa]
          Length = 423

 Score =  202 bits (515), Expect = 2e-49
 Identities = 164/450 (36%), Positives = 201/450 (44%), Gaps = 26/450 (5%)
 Frame = +1

Query: 520  DDEYDSRNESISAFLNPSSSSHXXXXXXXXXXXXXXXXXXXXXXXXXTSLFDPLSNYFDV 699
            D+EYDSR ES+ AFLNPS+ +                           +LFDP  + F V
Sbjct: 16   DEEYDSRPESLPAFLNPSTHN---------------FGPSLLSHQQPVTLFDPTPSLFHV 60

Query: 700  FXXXXXXXXXXXXXXLNLDVVWSRNLRSEPNSTDMXXXXXXXXXXXXXXXHQDVNRVIIQ 879
            F               N  +V SR LRS+PN TD+                        Q
Sbjct: 61   FSQSQP----------NPIMVQSRGLRSDPNCTDLGINLPDSLSSSQSAVLGVQGS--SQ 108

Query: 880  TPPSSVSLPQGADTSVKASASSSDPTN-VXXXXXXXXXXXXXXPTTVLTTDTSNFRAMVQ 1056
              PSS  L    D   ++S+ S D T+ +              PTTVLTTDTSNFR MVQ
Sbjct: 109  ALPSSKQLRSVHDDGGRSSSPSHDQTHGIARNPKKRTRASRRAPTTVLTTDTSNFRQMVQ 168

Query: 1057 EFTGIXXXXXXXXXXXXXXLDLFSTASTMRSGHLEPNRPPPYLLRPFAQK----PSPFAS 1224
            EFTGI              LDLF   S +RSGHLEP  P    LRP AQK     +PF S
Sbjct: 169  EFTGI-PAPPFSGSPFTRRLDLFGPGSGLRSGHLEPLYP----LRPTAQKVHHQQTPFLS 223

Query: 1225 SNM-----------------SPGIAXXXXXXXXXXXXXXXXXXXYQLLSELGLSKQSQNL 1353
            S+                  S                       YQL  ++GL KQ++NL
Sbjct: 224  SSFPSLLNNNIVHTTNIASTSTTANNNNTISTAATSTFNPSSLNYQLPDDIGLHKQTRNL 283

Query: 1354 VNMQNPLLTFQSLLQ-STIPPKYPSPNSSGFGDNSQGILSNTRMGTLDEFNMNHGQVRTH 1530
            +NMQN +L+   LL     PP    PN  G G NS+  L    + +L+E  M HG V  +
Sbjct: 284  LNMQNQMLSIHPLLHPPPPPPPQQLPNVPGLGANSRASLP---LPSLEELGMGHGYVNAN 340

Query: 1531 LNELPNFGTSDGMRNDNNFASNCGDGVGSNDGDQGQARSFNENYGNSQRANSCKLNFSGS 1710
            L+ L +  T++ MR              SNDG     RS N NYGN QR NSCKLN+S +
Sbjct: 341  LSGLTSHVTTEEMRL-------------SNDGSHHNLRSLNGNYGNMQRVNSCKLNYSSA 387

Query: 1711 SS---HEKGTENVTSRGGEGMVDSWICSSD 1791
            SS   HEKG ENV+SRG EG VDSWIC S+
Sbjct: 388  SSDFHHEKGLENVSSRGTEGTVDSWICPSE 417


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