BLASTX nr result

ID: Coptis24_contig00008293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008293
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539623.1| PREDICTED: probable LRR receptor-like serine...   211   5e-53
ref|XP_002332762.1| predicted protein [Populus trichocarpa] gi|2...   211   6e-53
ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...   210   8e-53
ref|XP_002283521.1| PREDICTED: probable LRR receptor-like serine...   208   4e-52
ref|XP_002332763.1| predicted protein [Populus trichocarpa] gi|2...   208   4e-52

>ref|XP_003539623.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Glycine max]
          Length = 1007

 Score =  211 bits (537), Expect = 5e-53
 Identities = 104/139 (74%), Positives = 120/139 (86%)
 Frame = -2

Query: 495  APEYAMRGHLTEKADVYSFGIVALEIVSGKSNTNYRPKEEFVNLLNWASVLQEQGNLLEL 316
            APEYAMRG+LT+KADVYSFGIVALEIVSGKSNTNYRPKEEFV LL+WA VLQEQGNLLEL
Sbjct: 838  APEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 897

Query: 315  VDPSLGANFSKKEAMTMLNIGLLCSNTSPTLRPAMSAVVSMLEGHSPVQAPLVVRGSMTD 136
            VDPSLG+ +S +EAM ML + LLC+N SPTLRP MS+VVSML+G +P+QAP++ RG   +
Sbjct: 898  VDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPCMSSVVSMLDGKTPIQAPIIKRGDSAE 957

Query: 135  HLRLKAFEKLPQDSQTQSS 79
             +R KAFE L QDSQTQ S
Sbjct: 958  DVRFKAFEMLSQDSQTQVS 976


>ref|XP_002332762.1| predicted protein [Populus trichocarpa] gi|222833105|gb|EEE71582.1|
            predicted protein [Populus trichocarpa]
          Length = 872

 Score =  211 bits (536), Expect = 6e-53
 Identities = 110/157 (70%), Positives = 125/157 (79%), Gaps = 6/157 (3%)
 Frame = -2

Query: 495  APEYAMRGHLTEKADVYSFGIVALEIVSGKSNTNYRPKEEFVNLLNWASVLQEQGNLLEL 316
            APEYAMRG+LT+KADVYSFG+V LEIVSGKSNTNYRPKEEFV LL+WA VLQEQGNLLEL
Sbjct: 685  APEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 744

Query: 315  VDPSLGANFSKKEAMTMLNIGLLCSNTSPTLRPAMSAVVSMLEGHSPVQAPLVVRGSMTD 136
            VDPSLG+N+SK EA+ MLN+ LLC+N SPTLRP+MS+ V MLEG  PVQAP+V R +M  
Sbjct: 745  VDPSLGSNYSKTEALRMLNLALLCTNPSPTLRPSMSSAVKMLEGQIPVQAPIVKRSTMNQ 804

Query: 135  HLRLKAFEKLPQDSQT------QSSHYTHEITMDCGP 43
              R KAFE L  DSQT      QSS   + I+MD GP
Sbjct: 805  DARFKAFELLSHDSQTHVSNGSQSSQIQNSISMD-GP 840


>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
            predicted protein [Populus trichocarpa]
          Length = 1015

 Score =  210 bits (535), Expect = 8e-53
 Identities = 109/157 (69%), Positives = 128/157 (81%), Gaps = 6/157 (3%)
 Frame = -2

Query: 495  APEYAMRGHLTEKADVYSFGIVALEIVSGKSNTNYRPKEEFVNLLNWASVLQEQGNLLEL 316
            APEYAMRG+LT+KADVYSFG+V LEIVSGKSNTNYRPKEEFV LL+WA VLQEQGNLLEL
Sbjct: 843  APEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 902

Query: 315  VDPSLGANFSKKEAMTMLNIGLLCSNTSPTLRPAMSAVVSMLEGHSPVQAPLVVRGSMTD 136
            VDP+LG+N+S++EAM MLN+ LLC+N SP+LRP MS+ VSM+EG  PVQAP+V RG+M +
Sbjct: 903  VDPNLGSNYSEEEAMRMLNLALLCTNPSPSLRPLMSSAVSMIEGQIPVQAPIVKRGTMNE 962

Query: 135  HLRLKAFEKLPQDSQ------TQSSHYTHEITMDCGP 43
              R KAFE L QDSQ      +QSS     I+MD GP
Sbjct: 963  EARFKAFELLSQDSQAHVSNTSQSSLVQKSISMD-GP 998


>ref|XP_002283521.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g53430-like [Vitis vinifera]
          Length = 1023

 Score =  208 bits (529), Expect = 4e-52
 Identities = 103/144 (71%), Positives = 122/144 (84%)
 Frame = -2

Query: 495  APEYAMRGHLTEKADVYSFGIVALEIVSGKSNTNYRPKEEFVNLLNWASVLQEQGNLLEL 316
            APEYAMRG+LT+KADVYSFG+VALEIVSGKSNTNYRPKEEFV LL+WA VL EQGN+LEL
Sbjct: 832  APEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLHEQGNILEL 891

Query: 315  VDPSLGANFSKKEAMTMLNIGLLCSNTSPTLRPAMSAVVSMLEGHSPVQAPLVVRGSMTD 136
            VDP LG+N+S++EA  MLN+ LLC+N SPTLRP+MS+VVSMLEG   VQAP+V + SM  
Sbjct: 892  VDPILGSNYSEEEAAKMLNLSLLCTNPSPTLRPSMSSVVSMLEGKIAVQAPIVKKSSMNQ 951

Query: 135  HLRLKAFEKLPQDSQTQSSHYTHE 64
             +R KAFEKL QDSQ+  S ++ E
Sbjct: 952  DMRFKAFEKLSQDSQSHVSAFSQE 975


>ref|XP_002332763.1| predicted protein [Populus trichocarpa] gi|222833106|gb|EEE71583.1|
            predicted protein [Populus trichocarpa]
          Length = 944

 Score =  208 bits (529), Expect = 4e-52
 Identities = 109/157 (69%), Positives = 124/157 (78%), Gaps = 6/157 (3%)
 Frame = -2

Query: 495  APEYAMRGHLTEKADVYSFGIVALEIVSGKSNTNYRPKEEFVNLLNWASVLQEQGNLLEL 316
            APEYAMRG+LT+KADVYSFG+V LEIVSGKSNTNYRPKEEFV LL+WA VLQEQGNLLEL
Sbjct: 757  APEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLEL 816

Query: 315  VDPSLGANFSKKEAMTMLNIGLLCSNTSPTLRPAMSAVVSMLEGHSPVQAPLVVRGSMTD 136
            VDPSLG+N+SK EA+ MLN+ LLC+N SPTLRP+MS+ V MLEG  PVQAP+V R +M  
Sbjct: 817  VDPSLGSNYSKIEALRMLNLALLCTNPSPTLRPSMSSAVKMLEGQIPVQAPIVKRSTMNQ 876

Query: 135  HLRLKAFEKLPQDSQT------QSSHYTHEITMDCGP 43
              R KAFE L  DSQT      Q+S     I+MD GP
Sbjct: 877  DARFKAFELLSHDSQTYVSNGSQNSQIQKSISMD-GP 912


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