BLASTX nr result

ID: Coptis24_contig00008278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008278
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546989.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   193   8e-47
ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   185   2e-44
ref|XP_003543562.1| PREDICTED: uncharacterized protein LOC100813...   185   2e-44
ref|XP_003597516.1| FAR1-related protein [Medicago truncatula] g...   182   1e-43
ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, ...   181   4e-43

>ref|XP_003546989.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 259

 Score =  193 bits (490), Expect = 8e-47
 Identities = 117/261 (44%), Positives = 165/261 (63%), Gaps = 9/261 (3%)
 Frame = +1

Query: 115 MANTSDIGSELMDRDLSVE---NGSSEEVDTVGECDDTSGNERVDFA--PVHGLAMKIVP 279
           M + S  G +  D DL ++   +   E+VD   +  +  G E   F   PV  ++  I  
Sbjct: 1   MDHQSGQGFDSDDSDLDMQAEISDKHEKVDEFSKNLEICGGEDEMFVEQPVADISTDIEA 60

Query: 280 SEPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFRRQR 459
            EP++GMEF S ++AR+ Y  YGRR GFT+R++  RRS  + + IG  +VCSKEGFR ++
Sbjct: 61  VEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKK 120

Query: 460 HLTEGRKIRLSKQP---RVGCKAMLIIVYRRDMEKWVVTKFVREHNHELMILSEVPVR-A 627
           +L   RK R+   P   R GC+AM+ +   RD  KWVVTKFV+EH H+LM  S+VP R +
Sbjct: 121 YL--HRKDRVLPPPPATREGCQAMIRLAL-RDRGKWVVTKFVKEHTHKLMSPSKVPCRGS 177

Query: 628 DKAPLNEDEKNKKIRELTAKLYSERQRFQRQCAIYEERCAAYRDQIGKILKDIEVHNDQI 807
            K  ++EDEK+K+IREL+ +LY+ERQ+ +R       RCAAY +Q+  IL D+E H + I
Sbjct: 178 GKHLVSEDEKDKRIRELSLELYNERQKCKR-------RCAAYEEQLNVILNDLEKHTEHI 230

Query: 808 TKKVGNVVRSMREIEDEDSQS 870
           +KKV  VVRS+REIE+E S S
Sbjct: 231 SKKVAAVVRSIREIEEEKSDS 251


>ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
           gi|449521695|ref|XP_004167865.1| PREDICTED: protein
           FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
          Length = 255

 Score =  185 bits (470), Expect = 2e-44
 Identities = 104/247 (42%), Positives = 159/247 (64%), Gaps = 3/247 (1%)
 Frame = +1

Query: 130 DIGSELMDRDLSVENGSSEEVDTVGECDDTSGNERVDFAPVHGLAMKIVPSEPYVGMEFE 309
           DI +E+ ++  S+++    ++D     DD    + V   P+ G+       EPY+GMEF 
Sbjct: 17  DIQTEIYEKGGSIDD-IRNDLDFCLRDDDKVAEQSVVDLPMDGV-------EPYIGMEFS 68

Query: 310 SADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFRRQRHLTEGRKIRL 489
           S D+AR+ Y  YGRR GFT+R++  RRS  + + IG  +VCSKEGFR ++++   RK R+
Sbjct: 69  SRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVC--RKDRI 126

Query: 490 SKQP---RVGCKAMLIIVYRRDMEKWVVTKFVREHNHELMILSEVPVRADKAPLNEDEKN 660
              P   R GC+AM+ +  R D  KW VTKFV++HNH L+  S+VP +     L+EDEK+
Sbjct: 127 LPAPPITREGCQAMMRLALR-DGGKWAVTKFVKDHNHLLLSPSKVPWKGSGKNLSEDEKD 185

Query: 661 KKIRELTAKLYSERQRFQRQCAIYEERCAAYRDQIGKILKDIEVHNDQITKKVGNVVRSM 840
           K+IREL+ +LY+ERQ+++R+CA YEE       Q+  I K++E+H + I+ KV  VV+S+
Sbjct: 186 KRIRELSLELYNERQKYKRKCAAYEE-------QLKTIWKELEMHTECISNKVAEVVKSI 238

Query: 841 REIEDED 861
           RE+E+E+
Sbjct: 239 REVEEEE 245


>ref|XP_003543562.1| PREDICTED: uncharacterized protein LOC100813124 [Glycine max]
          Length = 256

 Score =  185 bits (469), Expect = 2e-44
 Identities = 114/263 (43%), Positives = 165/263 (62%), Gaps = 11/263 (4%)
 Frame = +1

Query: 115 MANTSDIGSELMDRDLSVENGSSEE---VDTVGECDDTSGNERVDFA----PVHGLAMKI 273
           M + S  G    D DL ++   SE+   VD   +  +  G+E   F     P+  ++  I
Sbjct: 1   MDHQSGQGFNSDDSDLDMQAEISEKHKKVDEFSKNLELCGSEDEMFVEIEQPLANISTDI 60

Query: 274 VPSEPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFRR 453
              EP++GMEF S ++AR+ Y  YGRR GFT+R++  RRS  + + IG  +VCSKEGFR 
Sbjct: 61  EAVEPFIGMEFNSREEAREFYIAYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRA 120

Query: 454 QRHLTEGRKIRLSKQP---RVGCKAMLIIVYRRDMEKWVVTKFVREHNHELMILSEVPVR 624
           ++++   R+ R+   P   R GC+AM+ +   RD  KWVVTKFV+EH H+LM  S+VP R
Sbjct: 121 KKYV--HRRDRVLPPPPATREGCQAMIRLAL-RDGGKWVVTKFVKEHTHKLMSPSKVPWR 177

Query: 625 -ADKAPLNEDEKNKKIRELTAKLYSERQRFQRQCAIYEERCAAYRDQIGKILKDIEVHND 801
            + K  ++EDEK+K+IREL+ +LY+ERQ+ +R       RCAAY +Q+  IL D+E H +
Sbjct: 178 GSGKHLVSEDEKDKRIRELSLELYNERQKCKR-------RCAAYEEQLNMILNDLEKHTE 230

Query: 802 QITKKVGNVVRSMREIEDEDSQS 870
            I++KV  VVRS+REIE+E S S
Sbjct: 231 HISEKVAAVVRSIREIEEEISDS 253


>ref|XP_003597516.1| FAR1-related protein [Medicago truncatula]
           gi|355486564|gb|AES67767.1| FAR1-related protein
           [Medicago truncatula]
          Length = 252

 Score =  182 bits (462), Expect = 1e-43
 Identities = 98/200 (49%), Positives = 141/200 (70%), Gaps = 4/200 (2%)
 Frame = +1

Query: 283 EPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFRRQRH 462
           EP++GM+F S ++AR  YD YGRR GFT+R++  RRS  + E IG  +VCSKEGFR +++
Sbjct: 60  EPFIGMQFNSREEARGFYDGYGRRIGFTVRIHHNRRSRVNNELIGQDFVCSKEGFRAKKY 119

Query: 463 LTEGRKIRLSKQP---RVGCKAMLIIVYRRDMEKWVVTKFVREHNHELMILSEVPVR-AD 630
           +   RK R+   P   R GC+AM+ +   RD  KWVVTKFV+EH H+LM   EVP R + 
Sbjct: 120 V--HRKDRVLPPPPATREGCQAMIRLAL-RDEGKWVVTKFVKEHTHKLMSPGEVPWRGSG 176

Query: 631 KAPLNEDEKNKKIRELTAKLYSERQRFQRQCAIYEERCAAYRDQIGKILKDIEVHNDQIT 810
           K  ++EDEK+++IREL+ +L++ERQ+++R       RCAAY +Q+  IL D+E H + I+
Sbjct: 177 KHLVSEDEKDRRIRELSLELHNERQKYKR-------RCAAYEEQLNTILNDLEKHTEHIS 229

Query: 811 KKVGNVVRSMREIEDEDSQS 870
           KKV +VV+++REIE+E S S
Sbjct: 230 KKVADVVQNIREIEEEKSDS 249


>ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, partial [Vitis
           vinifera]
          Length = 244

 Score =  181 bits (458), Expect = 4e-43
 Identities = 97/196 (49%), Positives = 140/196 (71%), Gaps = 4/196 (2%)
 Frame = +1

Query: 283 EPYVGMEFESADDARKHYDEYGRRNGFTIRVNKKRRSDRDREAIGFSYVCSKEGFRRQRH 462
           EPY+GMEF S D+AR+ Y  YGRR GFT+R++  RRS  + + IG  +VCSKEGFR +++
Sbjct: 59  EPYIGMEFNSRDEAREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKY 118

Query: 463 LTEGRKIRLSKQP---RVGCKAMLIIVYRRDMEKWVVTKFVREHNHELMILSEVPVR-AD 630
           +   RK R+   P   R GC+AM+ +   RD  KWVVTKFV+EH+H+LM  S+VP R + 
Sbjct: 119 VY--RKDRVLPPPPITREGCQAMIRLAL-RDGAKWVVTKFVKEHSHKLMSPSKVPWRGSG 175

Query: 631 KAPLNEDEKNKKIRELTAKLYSERQRFQRQCAIYEERCAAYRDQIGKILKDIEVHNDQIT 810
           K  ++EDEK+K+IREL+ +L +ERQ+ +R       RCAAY +Q+  ILKD+E H + ++
Sbjct: 176 KHLVSEDEKDKRIRELSLELNNERQKCKR-------RCAAYEEQLNMILKDLEKHTEHMS 228

Query: 811 KKVGNVVRSMREIEDE 858
           +KV ++V+S+REIE+E
Sbjct: 229 RKVSDIVQSIREIEEE 244


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