BLASTX nr result

ID: Coptis24_contig00008272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008272
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN70797.1| endo-1,4-beta-glucanase [Gossypium schwendimanii]      120   2e-25
gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum] gi|3...   119   2e-25
gb|AEN70816.1| endo-1,4-beta-glucanase [Gossypium gossypioides]       119   2e-25
gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri] gi|34...   119   2e-25
gb|ADY68791.1| membrane-anchored endo-1,4-beta-glucanase [Gossyp...   119   2e-25

>gb|AEN70797.1| endo-1,4-beta-glucanase [Gossypium schwendimanii]
          Length = 619

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/73 (79%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -1

Query: 255 GWKWRDSSEPNSNIVVGAMVAGPDKNDEFRDVRTNYNYTEPTFAGNAGLVASLVALSGVR 76
           GWKWRD+S+PN N +VGAMVAGPDK+D FRDVRTNYNYTEPT AGNAGLVA+LVALSG +
Sbjct: 531 GWKWRDTSKPNPNTLVGAMVAGPDKHDAFRDVRTNYNYTEPTLAGNAGLVAALVALSGDK 590

Query: 75  -TGIDINSMFSAV 40
            TGID N++FSAV
Sbjct: 591 ATGIDKNTIFSAV 603


>gb|AAQ08018.1| endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|324984021|gb|ADY68793.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium raimondii]
           gi|324984025|gb|ADY68795.1| membrane-anchored
           endo-1,4-beta-glucanase [Gossypium hirsutum]
           gi|345103947|gb|AEN70795.1| endo-1,4-beta-glucanase
           [Gossypium thurberi] gi|345103949|gb|AEN70796.1|
           endo-1,4-beta-glucanase [Gossypium laxum]
           gi|345103957|gb|AEN70800.1| endo-1,4-beta-glucanase
           [Gossypium mustelinum] gi|345103983|gb|AEN70813.1|
           endo-1,4-beta-glucanase [Gossypium davidsonii]
           gi|345103985|gb|AEN70814.1| endo-1,4-beta-glucanase
           [Gossypium klotzschianum] gi|345103987|gb|AEN70815.1|
           endo-1,4-beta-glucanase [Gossypium aridum]
           gi|345103991|gb|AEN70817.1| endo-1,4-beta-glucanase
           [Gossypium lobatum] gi|345103993|gb|AEN70818.1|
           endo-1,4-beta-glucanase [Gossypium trilobum]
          Length = 619

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/73 (79%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -1

Query: 255 GWKWRDSSEPNSNIVVGAMVAGPDKNDEFRDVRTNYNYTEPTFAGNAGLVASLVALSGVR 76
           GWKWRD+S+PN N +VGAMVAGPDK+D FRDVRTNYNYTEPT AGNAGLVA+LVALSG +
Sbjct: 531 GWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGDK 590

Query: 75  -TGIDINSMFSAV 40
            TGID N++FSAV
Sbjct: 591 ATGIDKNTIFSAV 603


>gb|AEN70816.1| endo-1,4-beta-glucanase [Gossypium gossypioides]
          Length = 619

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/73 (79%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -1

Query: 255 GWKWRDSSEPNSNIVVGAMVAGPDKNDEFRDVRTNYNYTEPTFAGNAGLVASLVALSGVR 76
           GWKWRD+S+PN N +VGAMVAGPDK+D FRDVRTNYNYTEPT AGNAGLVA+LVALSG +
Sbjct: 531 GWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGDK 590

Query: 75  -TGIDINSMFSAV 40
            TGID N++FSAV
Sbjct: 591 ATGIDKNTIFSAV 603


>gb|AEN70798.1| endo-1,4-beta-glucanase [Gossypium turneri]
           gi|345103979|gb|AEN70811.1| endo-1,4-beta-glucanase
           [Gossypium armourianum] gi|345103981|gb|AEN70812.1|
           endo-1,4-beta-glucanase [Gossypium harknessii]
          Length = 619

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/73 (79%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -1

Query: 255 GWKWRDSSEPNSNIVVGAMVAGPDKNDEFRDVRTNYNYTEPTFAGNAGLVASLVALSGVR 76
           GWKWRD+S+PN N +VGAMVAGPDK+D FRDVRTNYNYTEPT AGNAGLVA+LVALSG +
Sbjct: 531 GWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGDK 590

Query: 75  -TGIDINSMFSAV 40
            TGID N++FSAV
Sbjct: 591 ATGIDKNTIFSAV 603


>gb|ADY68791.1| membrane-anchored endo-1,4-beta-glucanase [Gossypium barbadense]
           gi|345103961|gb|AEN70802.1| endo-1,4-beta-glucanase
           [Gossypium darwinii] gi|345103963|gb|AEN70803.1|
           endo-1,4-beta-glucanase [Gossypium tomentosum]
           gi|345103965|gb|AEN70804.1| endo-1,4-beta-glucanase
           [Gossypium tomentosum] gi|345103969|gb|AEN70806.1|
           endo-1,4-beta-glucanase [Gossypium barbadense var.
           brasiliense] gi|345103973|gb|AEN70808.1|
           endo-1,4-beta-glucanase [Gossypium barbadense var.
           peruvianum]
          Length = 619

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/73 (79%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = -1

Query: 255 GWKWRDSSEPNSNIVVGAMVAGPDKNDEFRDVRTNYNYTEPTFAGNAGLVASLVALSGVR 76
           GWKWRD+S+PN N +VGAMVAGPDK+D FRDVRTNYNYTEPT AGNAGLVA+LVALSG +
Sbjct: 531 GWKWRDTSKPNPNTLVGAMVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGDK 590

Query: 75  -TGIDINSMFSAV 40
            TGID N++FSAV
Sbjct: 591 ATGIDKNTIFSAV 603


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