BLASTX nr result
ID: Coptis24_contig00008261
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008261
(1927 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase, chlo... 877 0.0
ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase, chloropl... 858 0.0
ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|2... 857 0.0
ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|2... 853 0.0
ref|XP_003550908.1| PREDICTED: asparaginyl-tRNA synthetase, chlo... 835 0.0
>ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase,
chloroplastic/mitochondrial-like isoform 2 [Vitis
vinifera] gi|297744376|emb|CBI37350.3| unnamed protein
product [Vitis vinifera]
Length = 584
Score = 877 bits (2265), Expect = 0.0
Identities = 443/593 (74%), Positives = 497/593 (83%), Gaps = 25/593 (4%)
Frame = +3
Query: 84 MAAAAS---CFRLRPQSSTRHISLYI--NRRSFHLRGDVFTRRSKITPYHQPTRQFSLYS 248
MAAA + R +PQS+ R +S Y N R+F T ++++ H P LY
Sbjct: 1 MAAALAPVVSLRFKPQSAVRLLSAYTKTNPRNFPT-----TSQTRMVTLHFP----QLYQ 51
Query: 249 IVT-------ISTTNDKKRYISCSAGG-------------KTVDVKQGEKVREFRKRLRI 368
+T + ++R + G + + GEKV EFRKRLR+
Sbjct: 52 PLTPPFIFFGVGAARPRRRCFCTAISGALSSGEAIEKPKPEFFSAETGEKVGEFRKRLRV 111
Query: 369 VDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCLSNMQCVINSDADGYDQ 548
VD+KGG DEGLD LG+ L VKGWVRTLRVQSSV F+EVNDGSCLSNMQCV+NSDADGYDQ
Sbjct: 112 VDIKGGPDEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNMQCVMNSDADGYDQ 171
Query: 549 VESGFISTGASVWVEGVVVISQGSKQKVELNVGKVITVGRSDSSFPIQKKKVSREFLRTK 728
VESG I+TGASV ++G +V SQGSKQKVEL V K++TVG+SD SFPIQKK+VSREFLRTK
Sbjct: 172 VESGSITTGASVSIQGTLVASQGSKQKVELKVLKIVTVGKSDPSFPIQKKRVSREFLRTK 231
Query: 729 AHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIP 908
AHLRPRTNTFGAVARVRNALAYATHKFFQENGFVW+SSPIITASDCEGAGEQFCVTTLIP
Sbjct: 232 AHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWISSPIITASDCEGAGEQFCVTTLIP 291
Query: 909 TSGESMDSPVCSIPNTESGLIDWSQDFFGKPAFLTVSGQLNAETYASAFSDVYTFGPTFR 1088
+S E+ DS V +IP + GLIDWSQDFFGKPAFLTVSGQLNAETYA+A SDVYTFGPTFR
Sbjct: 292 SSREATDSTVDAIPKAKDGLIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFR 351
Query: 1089 AENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYLVKYVLDNCKEDMDFFNTWIEK 1268
AENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQY+V Y+L+NCKEDM+FFNTWIEK
Sbjct: 352 AENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVTYILENCKEDMEFFNTWIEK 411
Query: 1269 GIIDRLSDVAEKFFVQLTYTDAIELLLRANKKFEFPVKWGCDLQSEHERYITEVAYAGCP 1448
GII+RLSDVAEK FVQLTYTDA+ELLLRANKKFEFPVKWGCDLQSEHERYITEVA+ GCP
Sbjct: 412 GIINRLSDVAEKNFVQLTYTDAVELLLRANKKFEFPVKWGCDLQSEHERYITEVAFGGCP 471
Query: 1449 VIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVGELMGGSQREERLDYLDARLDELKLN 1628
VIIRDYPK+IKAFYMR+N+DG+TVAAMD+LVPRVGEL+GGSQREERL+YL+ RLD+LKL+
Sbjct: 472 VIIRDYPKDIKAFYMRRNDDGKTVAAMDMLVPRVGELIGGSQREERLEYLEERLDDLKLS 531
Query: 1629 KESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGIDNIRDVIPFPRTPGSAEF 1787
K+SYWWY DLRR+GSVPHAGFGLGFERLVQFATGIDNIRD IPFPRTPGSAEF
Sbjct: 532 KDSYWWYLDLRRYGSVPHAGFGLGFERLVQFATGIDNIRDAIPFPRTPGSAEF 584
>ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like
[Cucumis sativus] gi|449504980|ref|XP_004162346.1|
PREDICTED: asparagine--tRNA ligase,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 562
Score = 858 bits (2218), Expect = 0.0
Identities = 413/489 (84%), Positives = 455/489 (93%)
Frame = +3
Query: 321 VKQGEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTFLEVNDGSCL 500
V +GEKV EFRK+LRI ++KGG DEG+D LG+ VV GWVRTLRVQSSVTF+EVNDGSC+
Sbjct: 74 VTRGEKVGEFRKKLRISEIKGGRDEGVDRLGQTFVVMGWVRTLRVQSSVTFMEVNDGSCI 133
Query: 501 SNMQCVINSDADGYDQVESGFISTGASVWVEGVVVISQGSKQKVELNVGKVITVGRSDSS 680
SNMQCVI+S +GYDQVESG I+TGASVWVEGVVV SQGSKQKVEL + KVI VG+SD S
Sbjct: 134 SNMQCVIDSTTEGYDQVESGLITTGASVWVEGVVVASQGSKQKVELKLQKVIVVGKSDPS 193
Query: 681 FPIQKKKVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITAS 860
FP+QKKKVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITAS
Sbjct: 194 FPVQKKKVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVWVSSPIITAS 253
Query: 861 DCEGAGEQFCVTTLIPTSGESMDSPVCSIPNTESGLIDWSQDFFGKPAFLTVSGQLNAET 1040
DCEGAGEQFCVTTLIP+SGE S V SIP T+ G IDWSQDFFGKPAFLTVSGQLNAET
Sbjct: 254 DCEGAGEQFCVTTLIPSSGEPARSDVGSIPKTKEGFIDWSQDFFGKPAFLTVSGQLNAET 313
Query: 1041 YASAFSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYLVKYVL 1220
YA+A SDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADL+DDM+CATAYLQY+V+++L
Sbjct: 314 YATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLDDDMSCATAYLQYVVRHIL 373
Query: 1221 DNCKEDMDFFNTWIEKGIIDRLSDVAEKFFVQLTYTDAIELLLRANKKFEFPVKWGCDLQ 1400
+NCKED+DFFNTWIEKGIIDRL+++ E FVQL YTDAIELLLRANKKFE+PVKWG DLQ
Sbjct: 374 ENCKEDLDFFNTWIEKGIIDRLTNLVENDFVQLPYTDAIELLLRANKKFEYPVKWGSDLQ 433
Query: 1401 SEHERYITEVAYAGCPVIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVGELMGGSQRE 1580
SEHERYITEVA+ GCPVIIRDYP++IKAFYMRQN+DG+TVAAMD+LVP++GEL+GGSQRE
Sbjct: 434 SEHERYITEVAFGGCPVIIRDYPRDIKAFYMRQNDDGKTVAAMDMLVPKIGELIGGSQRE 493
Query: 1581 ERLDYLDARLDELKLNKESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGIDNIRDVIPF 1760
ERLDYL+ARLD+LKLNKESYWWY DLRR+GSVPHAGFGLGFERLVQF TGIDNIRD IPF
Sbjct: 494 ERLDYLEARLDDLKLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFVTGIDNIRDAIPF 553
Query: 1761 PRTPGSAEF 1787
PR+PGSAEF
Sbjct: 554 PRSPGSAEF 562
>ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|222837389|gb|EEE75768.1|
predicted protein [Populus trichocarpa]
Length = 574
Score = 857 bits (2213), Expect = 0.0
Identities = 424/572 (74%), Positives = 489/572 (85%), Gaps = 8/572 (1%)
Frame = +3
Query: 96 ASCFRLRPQSSTRHISLYINRRSFHLRGDVFTRRSKITPYHQPTRQFSLYSIVTISTTND 275
A+ RL P S+ R +S Y +L G + T IT H +F + ++ +S
Sbjct: 9 ATSLRLTPGSTLRLLSFYSKSNPSNLSGILKT----ITKPHAIPPKF--HHLLQLSGLPC 62
Query: 276 KKRYISCSAGG----KTVDVKQ----GEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVVK 431
++ + S G ++ V++ G +V EFR++L+I D+KGG DEGLD +GK ++V
Sbjct: 63 RRFFCSVIYGALQSSESAKVEKKGEIGNRVGEFRRKLKIADIKGGPDEGLDRVGKTIIVM 122
Query: 432 GWVRTLRVQSSVTFLEVNDGSCLSNMQCVINSDADGYDQVESGFISTGASVWVEGVVVIS 611
GWVRTLRVQSSVTF+EVNDGSCLSN+QCV++ +A+GYDQVESG ++TGAS+W++G VV S
Sbjct: 123 GWVRTLRVQSSVTFIEVNDGSCLSNLQCVMDLEAEGYDQVESGLVTTGASIWMQGTVVKS 182
Query: 612 QGSKQKVELNVGKVITVGRSDSSFPIQKKKVSREFLRTKAHLRPRTNTFGAVARVRNALA 791
QGSKQKVEL V K++ VG+SD S+PIQKK+VSREFLRTKAHLRPRTNTFGAVARVRNALA
Sbjct: 183 QGSKQKVELKVIKIVAVGKSDPSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNALA 242
Query: 792 YATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPTSGESMDSPVCSIPNTESGLI 971
YATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIP S E+ +SPV IP T+ GLI
Sbjct: 243 YATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPGSQEAANSPVDGIPKTKDGLI 302
Query: 972 DWSQDFFGKPAFLTVSGQLNAETYASAFSDVYTFGPTFRAENSNTSRHLAEFWMIEPELA 1151
DWSQDFFGKPAFLTVSGQLNAETYA+A SDVYTFGPTFRAENSNTSRHLAEFWMIEPELA
Sbjct: 303 DWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELA 362
Query: 1152 FADLNDDMACATAYLQYLVKYVLDNCKEDMDFFNTWIEKGIIDRLSDVAEKFFVQLTYTD 1331
FADLNDDMACATAYLQY+V+++L+NCKEDM+FFNTWIEKGIIDRLSDV EK FVQLTYTD
Sbjct: 363 FADLNDDMACATAYLQYVVRHILENCKEDMEFFNTWIEKGIIDRLSDVVEKDFVQLTYTD 422
Query: 1332 AIELLLRANKKFEFPVKWGCDLQSEHERYITEVAYAGCPVIIRDYPKEIKAFYMRQNEDG 1511
AIELLL+A KKFEFP++WGCDLQSEHERYITE + GCPVIIRDYPK+IKAFYMRQN+DG
Sbjct: 423 AIELLLKAKKKFEFPLEWGCDLQSEHERYITEEVFGGCPVIIRDYPKDIKAFYMRQNDDG 482
Query: 1512 RTVAAMDLLVPRVGELMGGSQREERLDYLDARLDELKLNKESYWWYRDLRRFGSVPHAGF 1691
+TVAAMD+LVPRVGEL+GGSQREERL+Y++ RLDELKLNKES+WWY DLRR+GSVPHAGF
Sbjct: 483 KTVAAMDMLVPRVGELIGGSQREERLEYIEDRLDELKLNKESFWWYLDLRRYGSVPHAGF 542
Query: 1692 GLGFERLVQFATGIDNIRDVIPFPRTPGSAEF 1787
GLGFERLVQFATGIDNIRD IPFPR PGSAEF
Sbjct: 543 GLGFERLVQFATGIDNIRDAIPFPRVPGSAEF 574
>ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|222852701|gb|EEE90248.1|
predicted protein [Populus trichocarpa]
Length = 578
Score = 853 bits (2204), Expect = 0.0
Identities = 429/574 (74%), Positives = 487/574 (84%), Gaps = 10/574 (1%)
Frame = +3
Query: 96 ASCFRLRPQSSTRHISLYINRRSFHLRG--DVFTRRSKITP-YHQ-------PTRQFSLY 245
A+ RL P S+ R +S Y +L T+ I P +H P R+F
Sbjct: 9 ATSLRLNPGSTLRLLSFYPKSNPSNLPEILKTMTKPHAIPPKFHHFFQLSGLPRRRF-FC 67
Query: 246 SIVTISTTNDKKRYISCSAGGKTVDVKQGEKVREFRKRLRIVDVKGGLDEGLDWLGKKLV 425
S+++ + +++ + K+ DV G +V EFRK+L+I D+KGG DEGLD +GK +V
Sbjct: 68 SVISGALQSNESAKVGFLEKEKS-DV--GNRVGEFRKKLKIADIKGGPDEGLDRVGKTIV 124
Query: 426 VKGWVRTLRVQSSVTFLEVNDGSCLSNMQCVINSDADGYDQVESGFISTGASVWVEGVVV 605
V GWVRTLRVQSSVTF+EVNDGSCLSNMQCV+ +A+GYDQVESG I+TGAS+ V+G VV
Sbjct: 125 VMGWVRTLRVQSSVTFIEVNDGSCLSNMQCVMGLEAEGYDQVESGLITTGASILVQGTVV 184
Query: 606 ISQGSKQKVELNVGKVITVGRSDSSFPIQKKKVSREFLRTKAHLRPRTNTFGAVARVRNA 785
SQGSKQKVEL V K++ VG+SD S+PIQKK+VSREFLRTKAHLRPRTNTFGAVARVRNA
Sbjct: 185 ESQGSKQKVELKVNKIVLVGKSDPSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNA 244
Query: 786 LAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPTSGESMDSPVCSIPNTESG 965
LAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIP S E +SPV IP T+ G
Sbjct: 245 LAYATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPGSQEVANSPVDRIPKTKDG 304
Query: 966 LIDWSQDFFGKPAFLTVSGQLNAETYASAFSDVYTFGPTFRAENSNTSRHLAEFWMIEPE 1145
LIDWSQDFFGKPAFLTVSGQLNAETYA+A SDVYTFGPTFRAENSNTSRHLAEFWMIEPE
Sbjct: 305 LIDWSQDFFGKPAFLTVSGQLNAETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPE 364
Query: 1146 LAFADLNDDMACATAYLQYLVKYVLDNCKEDMDFFNTWIEKGIIDRLSDVAEKFFVQLTY 1325
LAFADL DDMACATAYLQY+VK++L+NCKEDM+FFNTWIEKGIIDRL+DVAEK FVQLTY
Sbjct: 365 LAFADLTDDMACATAYLQYVVKHILENCKEDMEFFNTWIEKGIIDRLTDVAEKDFVQLTY 424
Query: 1326 TDAIELLLRANKKFEFPVKWGCDLQSEHERYITEVAYAGCPVIIRDYPKEIKAFYMRQNE 1505
TDA+ELLL+A KKFEFPV+WGCDLQSEHERYITE A+ GCPVIIRDYPK+IKAFYMRQN+
Sbjct: 425 TDAVELLLKAKKKFEFPVEWGCDLQSEHERYITEEAFGGCPVIIRDYPKDIKAFYMRQND 484
Query: 1506 DGRTVAAMDLLVPRVGELMGGSQREERLDYLDARLDELKLNKESYWWYRDLRRFGSVPHA 1685
DG+TVAAMD+LVPRVGEL+GGSQREERL+YL+ RLDELKLNKES+WWY DLRR+GSVPHA
Sbjct: 485 DGKTVAAMDMLVPRVGELIGGSQREERLEYLEDRLDELKLNKESFWWYLDLRRYGSVPHA 544
Query: 1686 GFGLGFERLVQFATGIDNIRDVIPFPRTPGSAEF 1787
GFGLGFERLVQFATG++NIRD IPFPR PGSAEF
Sbjct: 545 GFGLGFERLVQFATGLENIRDAIPFPRVPGSAEF 578
>ref|XP_003550908.1| PREDICTED: asparaginyl-tRNA synthetase,
chloroplastic/mitochondrial-like [Glycine max]
Length = 550
Score = 835 bits (2157), Expect = 0.0
Identities = 401/498 (80%), Positives = 456/498 (91%)
Frame = +3
Query: 294 CSAGGKTVDVKQGEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVVKGWVRTLRVQSSVTF 473
C+A +T D +V++FR++LR+ ++K G +G D LG+ LVV+GWVRTLR+QSSVTF
Sbjct: 59 CAATLRTSD----NRVQQFRRKLRVSEIKEG--DGADVLGRNLVVQGWVRTLRIQSSVTF 112
Query: 474 LEVNDGSCLSNMQCVINSDADGYDQVESGFISTGASVWVEGVVVISQGSKQKVELNVGKV 653
LE+NDGSCLSNMQCV+NS+A+GYDQVESG ++TGASVWV+GVVV SQGSKQKVEL V K+
Sbjct: 113 LEINDGSCLSNMQCVLNSEAEGYDQVESGLVTTGASVWVQGVVVKSQGSKQKVELKVNKI 172
Query: 654 ITVGRSDSSFPIQKKKVSREFLRTKAHLRPRTNTFGAVARVRNALAYATHKFFQENGFVW 833
+ +G+SD SFPIQKK+ SREFLRTKAHLR RTNTFGAVARVRNALAYATHKFFQENGFVW
Sbjct: 173 VLIGKSDPSFPIQKKRASREFLRTKAHLRARTNTFGAVARVRNALAYATHKFFQENGFVW 232
Query: 834 VSSPIITASDCEGAGEQFCVTTLIPTSGESMDSPVCSIPNTESGLIDWSQDFFGKPAFLT 1013
VSSPIITASDCEGAGEQFCVTTLIP+S E+ DSPV +IP T GLIDWSQDFFGKPAFLT
Sbjct: 233 VSSPIITASDCEGAGEQFCVTTLIPSSHETNDSPVDAIPKTNDGLIDWSQDFFGKPAFLT 292
Query: 1014 VSGQLNAETYASAFSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAY 1193
VSGQLN ETYA+A SDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAY
Sbjct: 293 VSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAY 352
Query: 1194 LQYLVKYVLDNCKEDMDFFNTWIEKGIIDRLSDVAEKFFVQLTYTDAIELLLRANKKFEF 1373
LQ+++++VLDNCKEDM+FF+ WI KGIIDRLSDVA+K VQ+TYT+AI+LL ANKKFEF
Sbjct: 353 LQFVIRHVLDNCKEDMEFFDAWINKGIIDRLSDVADKDVVQITYTEAIDLLSGANKKFEF 412
Query: 1374 PVKWGCDLQSEHERYITEVAYAGCPVIIRDYPKEIKAFYMRQNEDGRTVAAMDLLVPRVG 1553
PVKWG DLQSEHERYITE ++GCPVIIRDYPK+IKAFYMRQN+DGRTVAAMD+LVP +G
Sbjct: 413 PVKWGSDLQSEHERYITEEVFSGCPVIIRDYPKDIKAFYMRQNDDGRTVAAMDMLVPGIG 472
Query: 1554 ELMGGSQREERLDYLDARLDELKLNKESYWWYRDLRRFGSVPHAGFGLGFERLVQFATGI 1733
EL+GGSQREERL+YL+ARLD+LKLNK++YWWY DLRR+GSVPHAGFGLGFERLVQFATG+
Sbjct: 473 ELIGGSQREERLEYLEARLDDLKLNKDAYWWYLDLRRYGSVPHAGFGLGFERLVQFATGM 532
Query: 1734 DNIRDVIPFPRTPGSAEF 1787
DNIRDVIPFPRTPGSAEF
Sbjct: 533 DNIRDVIPFPRTPGSAEF 550