BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008259
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA41662.1| TPA: putative chromodomain helicase DNA binding ...    69   3e-10
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...    69   3e-10
ref|XP_001767461.1| predicted protein [Physcomitrella patens sub...    69   3e-10
ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...    69   4e-10
ref|XP_004140283.1| PREDICTED: chromodomain-helicase-DNA-binding...    69   4e-10

>tpg|DAA41662.1| TPA: putative chromodomain helicase DNA binding protein [Zea mays]
          Length = 1758

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -2

Query: 264 SMVSLLNIVVELKKCCNHPFLFESADHGYGGD 169
           ++VSLLNIVVELKKCCNHPFLFESADHGYGGD
Sbjct: 904 AVVSLLNIVVELKKCCNHPFLFESADHGYGGD 935


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 2083

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = -2

Query: 261  MVSLLNIVVELKKCCNHPFLFESADHGYGGD 169
            +VSLLNIVVELKKCCNHPFLFESADHGYGGD
Sbjct: 1213 LVSLLNIVVELKKCCNHPFLFESADHGYGGD 1243


>ref|XP_001767461.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162681357|gb|EDQ67785.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1569

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/51 (64%), Positives = 37/51 (72%)
 Frame = -2

Query: 321 FSDITNGY*NVTSMT*TKESMVSLLNIVVELKKCCNHPFLFESADHGYGGD 169
           F+D+  G          + + VSLLNIVVELKKCCNHPFLFESADHGYGGD
Sbjct: 654 FNDLNKG---------VRVNQVSLLNIVVELKKCCNHPFLFESADHGYGGD 695


>ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 2-like [Cucumis sativus]
          Length = 1761

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -2

Query: 264 SMVSLLNIVVELKKCCNHPFLFESADHGYGGD 169
           + VSLLNIVVELKKCCNHPFLFESADHGYGGD
Sbjct: 896 NQVSLLNIVVELKKCCNHPFLFESADHGYGGD 927


>ref|XP_004140283.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Cucumis
            sativus]
          Length = 1777

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/32 (93%), Positives = 31/32 (96%)
 Frame = -2

Query: 264  SMVSLLNIVVELKKCCNHPFLFESADHGYGGD 169
            + VSLLNIVVELKKCCNHPFLFESADHGYGGD
Sbjct: 912  NQVSLLNIVVELKKCCNHPFLFESADHGYGGD 943