BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008258
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    77   4e-24
emb|CBI24213.3| unnamed protein product [Vitis vinifera]               77   4e-24
gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protei...    76   7e-23
ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana] g...    76   7e-23
ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arab...    76   7e-23

>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score = 77.0 bits (188), Expect(2) = 4e-24
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = -3

Query: 131 LSLLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQK 3
           + L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQK
Sbjct: 823 MELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQK 865



 Score = 59.3 bits (142), Expect(2) = 4e-24
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -2

Query: 219 ALLHFLESEKFKNKEDFVERYKNLSSFNELELA 121
           ALLHFL+ +KFKNK+DFV+ YKNLSSFNE+ELA
Sbjct: 794 ALLHFLDPDKFKNKDDFVQNYKNLSSFNEMELA 826


>emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score = 77.0 bits (188), Expect(2) = 4e-24
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = -3

Query: 131 LSLLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQK 3
           + L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQK
Sbjct: 626 MELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQK 668



 Score = 59.3 bits (142), Expect(2) = 4e-24
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -2

Query: 219 ALLHFLESEKFKNKEDFVERYKNLSSFNELELA 121
           ALLHFL+ +KFKNK+DFV+ YKNLSSFNE+ELA
Sbjct: 597 ALLHFLDPDKFKNKDDFVQNYKNLSSFNEMELA 629


>gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
           thaliana]
          Length = 1738

 Score = 76.3 bits (186), Expect(2) = 7e-23
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = -3

Query: 125 LLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQK 3
           L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQK
Sbjct: 846 LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQK 886



 Score = 55.8 bits (133), Expect(2) = 7e-23
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -2

Query: 219 ALLHFLESEKFKNKEDFVERYKNLSSFNELELA 121
           ALLHFL+  KFKNK++FVE YKNLSSFNE ELA
Sbjct: 815 ALLHFLDPGKFKNKDEFVENYKNLSSFNESELA 847


>ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
           gi|330251136|gb|AEC06230.1| chromatin remodeling 5
           [Arabidopsis thaliana]
          Length = 1724

 Score = 76.3 bits (186), Expect(2) = 7e-23
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = -3

Query: 125 LLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQK 3
           L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQK
Sbjct: 832 LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQK 872



 Score = 55.8 bits (133), Expect(2) = 7e-23
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -2

Query: 219 ALLHFLESEKFKNKEDFVERYKNLSSFNELELA 121
           ALLHFL+  KFKNK++FVE YKNLSSFNE ELA
Sbjct: 801 ALLHFLDPGKFKNKDEFVENYKNLSSFNESELA 833


>ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
           lyrata] gi|297331712|gb|EFH62131.1| hypothetical protein
           ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata]
          Length = 1721

 Score = 76.3 bits (186), Expect(2) = 7e-23
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = -3

Query: 125 LLNLHTELRPHILRRVIKDVEKSLPPKIERILRVVMSPLQK 3
           L NLH ELRPHILRRVIKDVEKSLPPKIERILRV MSPLQK
Sbjct: 829 LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQK 869



 Score = 55.8 bits (133), Expect(2) = 7e-23
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -2

Query: 219 ALLHFLESEKFKNKEDFVERYKNLSSFNELELA 121
           ALLHFL+  KFKNK++FVE YKNLSSFNE ELA
Sbjct: 798 ALLHFLDPGKFKNKDEFVENYKNLSSFNESELA 830