BLASTX nr result

ID: Coptis24_contig00008247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008247
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272485.1| PREDICTED: actin-related protein 2 [Vitis vi...   236   1e-60
ref|XP_002298643.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-60
ref|XP_002512899.1| Actin, putative [Ricinus communis] gi|223547...   236   2e-60
ref|XP_004158496.1| PREDICTED: actin-related protein 2-like [Cuc...   235   3e-60
ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cuc...   235   3e-60

>ref|XP_002272485.1| PREDICTED: actin-related protein 2 [Vitis vinifera]
           gi|296082315|emb|CBI21320.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  236 bits (602), Expect = 1e-60
 Identities = 117/119 (98%), Positives = 117/119 (98%)
 Frame = +3

Query: 3   DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHC 182
           DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVF C
Sbjct: 223 DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRC 282

Query: 183 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRI 359
           IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLE VLKGNKDGLKKLRLRI
Sbjct: 283 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRI 341


>ref|XP_002298643.1| predicted protein [Populus trichocarpa] gi|222845901|gb|EEE83448.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  236 bits (602), Expect = 1e-60
 Identities = 116/119 (97%), Positives = 118/119 (99%)
 Frame = +3

Query: 3   DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHC 182
           DYKREYQLGLETTILVKNYTLPDGR+IKVGTERFQAPEALFTPELIDVEGDGMADMVF C
Sbjct: 223 DYKREYQLGLETTILVKNYTLPDGRIIKVGTERFQAPEALFTPELIDVEGDGMADMVFRC 282

Query: 183 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRI 359
           IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYL+AVLKGNKDGLKKLRLRI
Sbjct: 283 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLDAVLKGNKDGLKKLRLRI 341


>ref|XP_002512899.1| Actin, putative [Ricinus communis] gi|223547910|gb|EEF49402.1|
           Actin, putative [Ricinus communis]
          Length = 387

 Score =  236 bits (601), Expect = 2e-60
 Identities = 116/119 (97%), Positives = 117/119 (98%)
 Frame = +3

Query: 3   DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHC 182
           DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELID+EGDGMADMVF C
Sbjct: 223 DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDIEGDGMADMVFRC 282

Query: 183 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRI 359
           IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLE VLKGNKDGLKKLRLRI
Sbjct: 283 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRI 341


>ref|XP_004158496.1| PREDICTED: actin-related protein 2-like [Cucumis sativus]
          Length = 390

 Score =  235 bits (599), Expect = 3e-60
 Identities = 116/119 (97%), Positives = 117/119 (98%)
 Frame = +3

Query: 3   DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHC 182
           DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVF C
Sbjct: 224 DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRC 283

Query: 183 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRI 359
           IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLE VLKGN+DGLKKLRLRI
Sbjct: 284 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNRDGLKKLRLRI 342


>ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cucumis sativus]
          Length = 389

 Score =  235 bits (599), Expect = 3e-60
 Identities = 116/119 (97%), Positives = 117/119 (98%)
 Frame = +3

Query: 3   DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFHC 182
           DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVF C
Sbjct: 223 DYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRC 282

Query: 183 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEAVLKGNKDGLKKLRLRI 359
           IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLE VLKGN+DGLKKLRLRI
Sbjct: 283 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNRDGLKKLRLRI 341


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