BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008243
         (1164 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-55
ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...   103   3e-53
ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...   103   1e-52
ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609...    98   3e-52
ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [S...    99   3e-52

>ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|222854481|gb|EEE92028.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  102 bits (255), Expect(3) = 3e-55
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = -2

Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREA 87
           MQELPCKH FH  CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA
Sbjct: 240 MQELPCKHRFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEA 288



 Score = 88.6 bits (218), Expect(3) = 3e-55
 Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
 Frame = -1

Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHINK------------------LVMDAVPPRPTL 703
           F+EA  L  DS+E+ ++  CI  A EH+++                  L +D  PPRP  
Sbjct: 79  FQEALLLTSDSTEKEHLKNCIAQAKEHLDQIENPPDVSQNSGYLFEGHLTVDPEPPRPQW 138

Query: 702 QVANELL---ATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELMEEM 532
            V + +L   ATL     S + +                      DNNT + AS L+ E+
Sbjct: 139 LVQSNILNSMATLQEFESSGRPV----------------------DNNTIETASNLLGEL 176

Query: 531 VNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSDM 352
           +++           D +   +  +G++ P R PPASKEV+  LPVI+ITEEI+A LG D 
Sbjct: 177 MSNF----------DDMIPEIMEMGSTAP-RVPPASKEVVAKLPVITITEEILAELGKDA 225

Query: 351 QCVVCKENLDISE 313
           +C +CKENL +++
Sbjct: 226 ECAICKENLVVND 238



 Score = 72.8 bits (177), Expect(3) = 3e-55
 Identities = 33/74 (44%), Positives = 54/74 (72%)
 Frame = -2

Query: 1109 GMDEESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASI 930
            G +E+ +K+ L+ L+ ++ +K  F +A+SS K+LL  +YPSASPSL+++FY  +C VA++
Sbjct: 2    GSNEQLLKKELEELQKQLGKKQKFEDALSSLKSLLRLHYPSASPSLRKTFYSVVCRVATV 61

Query: 929  LQTRYTECELWVAG 888
            L+TRY     W+AG
Sbjct: 62   LKTRYIAPGFWLAG 75


>ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine
           max]
          Length = 313

 Score =  103 bits (257), Expect(3) = 3e-53
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = -2

Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAK 84
           MQELPCKH FH  CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA+
Sbjct: 246 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAE 295



 Score = 83.2 bits (204), Expect(3) = 3e-53
 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
 Frame = -1

Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHIN------------------------KLVMDAV 721
           FE+A  LV D SE+ ++  CI  A EH++                         L +D  
Sbjct: 78  FEQAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPE 137

Query: 720 PPRPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELM 541
           PP+P   V + LL T   +  +                          +  T   A+ ++
Sbjct: 138 PPQPQWLVQSNLLTTAATLFAAES------------------SQASEANETTQDDATNML 179

Query: 540 EEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLG 361
           E+++N + E+     ++D        +G   P R+PPASKEV+ NLPVI++TEEI+A LG
Sbjct: 180 EDLLNRLEEVVPL--MVD--------VGPVAP-RAPPASKEVVANLPVITLTEEILANLG 228

Query: 360 SDMQCVVCKENLDISE 313
            D +C +C+ENL +++
Sbjct: 229 KDAECAICRENLVLND 244



 Score = 70.5 bits (171), Expect(3) = 3e-53
 Identities = 34/71 (47%), Positives = 49/71 (69%)
 Frame = -2

Query: 1100 EESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQT 921
            E+ VK+ L+ L+ ++ +K  F  +VSS K LL   YPSASP+L++SFY  +C VA++L+T
Sbjct: 4    EDLVKQELEELQKQLGKKQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKT 63

Query: 920  RYTECELWVAG 888
            RYT    W AG
Sbjct: 64   RYTAPGFWNAG 74


>ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Glycine
           max]
          Length = 313

 Score =  103 bits (257), Expect(3) = 1e-52
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = -2

Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAK 84
           MQELPCKH FH  CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA+
Sbjct: 246 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAE 295



 Score = 81.3 bits (199), Expect(3) = 1e-52
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
 Frame = -1

Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHIN------------------------KLVMDAV 721
           FE+A  LV D SE+ ++  CI  A EH++                         L +D  
Sbjct: 78  FEQAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPE 137

Query: 720 PPRPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELM 541
           PP+P   V + LL T   +  +                          +  T   A+ ++
Sbjct: 138 PPQPQWLVQSNLLTTAATLFAAES------------------SQASEANETTQDDATNML 179

Query: 540 EEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLG 361
           E+++N + E+             +Q I + R   +PPASKEV+ NLPVI++TEEI+A LG
Sbjct: 180 EDLLNRLEEVVPL--------VFIQNIPSPR---APPASKEVVANLPVITLTEEILANLG 228

Query: 360 SDMQCVVCKENLDISE 313
            D +C +C+ENL +++
Sbjct: 229 KDAECAICRENLVLND 244



 Score = 70.5 bits (171), Expect(3) = 1e-52
 Identities = 34/71 (47%), Positives = 49/71 (69%)
 Frame = -2

Query: 1100 EESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQT 921
            E+ VK+ L+ L+ ++ +K  F  +VSS K LL   YPSASP+L++SFY  +C VA++L+T
Sbjct: 4    EDLVKQELEELQKQLGKKQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKT 63

Query: 920  RYTECELWVAG 888
            RYT    W AG
Sbjct: 64   RYTAPGFWNAG 74


>ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609736|gb|ACG26698.1|
           protein binding protein [Zea mays]
           gi|414589559|tpg|DAA40130.1| TPA: putative RING zinc
           finger domain superfamily protein [Zea mays]
           gi|414589560|tpg|DAA40131.1| TPA: putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 324

 Score = 98.2 bits (243), Expect(3) = 3e-52
 Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 22/194 (11%)
 Frame = -1

Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAVPP 715
           F   E+LV + +E+ ++ TCI  A EH+++                      L +   PP
Sbjct: 82  FVGIEKLVSNPAEKEHLKTCISRAREHLDEKENEDSVPSNREADTRFLFEGHLTVGQEPP 141

Query: 714 RPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELMEE 535
            P   VA  L   L ++  SS                         +N T  RA E+   
Sbjct: 142 PPAWLVAQNLTRELSILTESS-------------------GDQDGSNNRTVPRAEEITPA 182

Query: 534 MVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSD 355
           ++N +  IS  R+L   +E SLQGI    P R+PPASKEV+ NLPVI++TEE+M+RLGS+
Sbjct: 183 IMNLLETISGDRDLETALEESLQGI-IEYPQRAPPASKEVVANLPVIAVTEEVMSRLGSE 241

Query: 354 MQCVVCKENLDISE 313
            +C VC+ENL + +
Sbjct: 242 TECAVCRENLVVDD 255



 Score = 97.8 bits (242), Expect(3) = 3e-52
 Identities = 41/52 (78%), Positives = 46/52 (88%)
 Frame = -2

Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAKSN 78
           MQELPCKHLFH LCLKPWLD++NSCP+CRHEL TDDH YES KERERE + +
Sbjct: 257 MQELPCKHLFHPLCLKPWLDENNSCPICRHELRTDDHVYESRKEREREEEED 308



 Score = 58.2 bits (139), Expect(3) = 3e-52
 Identities = 29/75 (38%), Positives = 44/75 (58%)
 Frame = -2

Query: 1103 DEESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQ 924
            DE +V+  L+ L   + +K  F EAV+   A + + Y  ASP+L+++ Y  +C VA++LQ
Sbjct: 7    DEAAVEARLQELRGRLGKKQHFEEAVNELAAAVRDRYAGASPALRKAMYSTVCRVATVLQ 66

Query: 923  TRYTECELWVAGKEL 879
            TRYT    W  G  L
Sbjct: 67   TRYTAPGFWHVGLNL 81


>ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [Sorghum bicolor]
           gi|241925811|gb|EER98955.1| hypothetical protein
           SORBIDRAFT_02g025520 [Sorghum bicolor]
          Length = 324

 Score = 99.0 bits (245), Expect(3) = 3e-52
 Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
 Frame = -1

Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAVPP 715
           F   E+LV + +E+ ++ TCI  A EH+++                      L +   PP
Sbjct: 82  FMGTEKLVSNPAEKEHLKTCISRAREHLDEKENEDSMPSSREADTRFLFEGHLTVGQEPP 141

Query: 714 RPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELMEE 535
            P   VA  L   L ++  SS                          N T  RA E+   
Sbjct: 142 PPAWLVAQNLTRELSILTESS-------------------GDQDGNSNRTVPRAEEITPA 182

Query: 534 MVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSD 355
           ++N +  IS  R+L   +E SLQGI    P R+PPASKEV+ NLPVI++TEE++ARLGS+
Sbjct: 183 IMNLLESISGDRDLETALEESLQGI-IEHPPRAPPASKEVVANLPVIAVTEEVIARLGSE 241

Query: 354 MQCVVCKENLDISE 313
            +C VC+ENL + +
Sbjct: 242 TECAVCRENLVVDD 255



 Score = 94.0 bits (232), Expect(3) = 3e-52
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = -2

Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAKSN 78
           MQELPCKHLFH  CLKPWLD++NSCP+CRHEL TDDH YES KERE+E + +
Sbjct: 257 MQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDDHVYESRKEREKEEEED 308



 Score = 60.8 bits (146), Expect(3) = 3e-52
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = -2

Query: 1103 DEESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQ 924
            DE +V+  L+ L   + +K  F EAV+   A + + Y  ASP+L++S Y  +C VA++LQ
Sbjct: 7    DEAAVEARLQALRQRLGKKQHFEEAVNELAAAVRDRYAGASPTLRKSMYSTVCRVATVLQ 66

Query: 923  TRYTECELWVAGKEL 879
            TRYT    W AG  L
Sbjct: 67   TRYTAPGFWRAGLNL 81