BLASTX nr result
ID: Coptis24_contig00008243
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008243 (1164 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-55 ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-... 103 3e-53 ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-... 103 1e-52 ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609... 98 3e-52 ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [S... 99 3e-52 >ref|XP_002308505.1| predicted protein [Populus trichocarpa] gi|222854481|gb|EEE92028.1| predicted protein [Populus trichocarpa] Length = 307 Score = 102 bits (255), Expect(3) = 3e-55 Identities = 42/49 (85%), Positives = 45/49 (91%) Frame = -2 Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREA 87 MQELPCKH FH CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA Sbjct: 240 MQELPCKHRFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEA 288 Score = 88.6 bits (218), Expect(3) = 3e-55 Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 21/193 (10%) Frame = -1 Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHINK------------------LVMDAVPPRPTL 703 F+EA L DS+E+ ++ CI A EH+++ L +D PPRP Sbjct: 79 FQEALLLTSDSTEKEHLKNCIAQAKEHLDQIENPPDVSQNSGYLFEGHLTVDPEPPRPQW 138 Query: 702 QVANELL---ATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELMEEM 532 V + +L ATL S + + DNNT + AS L+ E+ Sbjct: 139 LVQSNILNSMATLQEFESSGRPV----------------------DNNTIETASNLLGEL 176 Query: 531 VNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSDM 352 +++ D + + +G++ P R PPASKEV+ LPVI+ITEEI+A LG D Sbjct: 177 MSNF----------DDMIPEIMEMGSTAP-RVPPASKEVVAKLPVITITEEILAELGKDA 225 Query: 351 QCVVCKENLDISE 313 +C +CKENL +++ Sbjct: 226 ECAICKENLVVND 238 Score = 72.8 bits (177), Expect(3) = 3e-55 Identities = 33/74 (44%), Positives = 54/74 (72%) Frame = -2 Query: 1109 GMDEESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASI 930 G +E+ +K+ L+ L+ ++ +K F +A+SS K+LL +YPSASPSL+++FY +C VA++ Sbjct: 2 GSNEQLLKKELEELQKQLGKKQKFEDALSSLKSLLRLHYPSASPSLRKTFYSVVCRVATV 61 Query: 929 LQTRYTECELWVAG 888 L+TRY W+AG Sbjct: 62 LKTRYIAPGFWLAG 75 >ref|XP_003544578.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 1 [Glycine max] Length = 313 Score = 103 bits (257), Expect(3) = 3e-53 Identities = 42/50 (84%), Positives = 46/50 (92%) Frame = -2 Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAK 84 MQELPCKH FH CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA+ Sbjct: 246 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAE 295 Score = 83.2 bits (204), Expect(3) = 3e-53 Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 24/196 (12%) Frame = -1 Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHIN------------------------KLVMDAV 721 FE+A LV D SE+ ++ CI A EH++ L +D Sbjct: 78 FEQAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPE 137 Query: 720 PPRPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELM 541 PP+P V + LL T + + + T A+ ++ Sbjct: 138 PPQPQWLVQSNLLTTAATLFAAES------------------SQASEANETTQDDATNML 179 Query: 540 EEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLG 361 E+++N + E+ ++D +G P R+PPASKEV+ NLPVI++TEEI+A LG Sbjct: 180 EDLLNRLEEVVPL--MVD--------VGPVAP-RAPPASKEVVANLPVITLTEEILANLG 228 Query: 360 SDMQCVVCKENLDISE 313 D +C +C+ENL +++ Sbjct: 229 KDAECAICRENLVLND 244 Score = 70.5 bits (171), Expect(3) = 3e-53 Identities = 34/71 (47%), Positives = 49/71 (69%) Frame = -2 Query: 1100 EESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQT 921 E+ VK+ L+ L+ ++ +K F +VSS K LL YPSASP+L++SFY +C VA++L+T Sbjct: 4 EDLVKQELEELQKQLGKKQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKT 63 Query: 920 RYTECELWVAG 888 RYT W AG Sbjct: 64 RYTAPGFWNAG 74 >ref|XP_003544579.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like isoform 2 [Glycine max] Length = 313 Score = 103 bits (257), Expect(3) = 1e-52 Identities = 42/50 (84%), Positives = 46/50 (92%) Frame = -2 Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAK 84 MQELPCKH FH CLKPWLD+HNSCP+CRHEL TDDHAYESWKERE+EA+ Sbjct: 246 MQELPCKHTFHPPCLKPWLDEHNSCPICRHELQTDDHAYESWKEREKEAE 295 Score = 81.3 bits (199), Expect(3) = 1e-52 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 24/196 (12%) Frame = -1 Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHIN------------------------KLVMDAV 721 FE+A LV D SE+ ++ CI A EH++ L +D Sbjct: 78 FEQAHLLVSDPSEKEHLKACIAQAREHLHLEDNPSQTLRPADNQANRGYLFEGHLTVDPE 137 Query: 720 PPRPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELM 541 PP+P V + LL T + + + T A+ ++ Sbjct: 138 PPQPQWLVQSNLLTTAATLFAAES------------------SQASEANETTQDDATNML 179 Query: 540 EEMVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLG 361 E+++N + E+ +Q I + R +PPASKEV+ NLPVI++TEEI+A LG Sbjct: 180 EDLLNRLEEVVPL--------VFIQNIPSPR---APPASKEVVANLPVITLTEEILANLG 228 Query: 360 SDMQCVVCKENLDISE 313 D +C +C+ENL +++ Sbjct: 229 KDAECAICRENLVLND 244 Score = 70.5 bits (171), Expect(3) = 1e-52 Identities = 34/71 (47%), Positives = 49/71 (69%) Frame = -2 Query: 1100 EESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQT 921 E+ VK+ L+ L+ ++ +K F +VSS K LL YPSASP+L++SFY +C VA++L+T Sbjct: 4 EDLVKQELEELQKQLGKKQKFEASVSSLKTLLQRTYPSASPALRKSFYSVLCRVATVLKT 63 Query: 920 RYTECELWVAG 888 RYT W AG Sbjct: 64 RYTAPGFWNAG 74 >ref|NP_001147307.1| protein binding protein [Zea mays] gi|195609736|gb|ACG26698.1| protein binding protein [Zea mays] gi|414589559|tpg|DAA40130.1| TPA: putative RING zinc finger domain superfamily protein [Zea mays] gi|414589560|tpg|DAA40131.1| TPA: putative RING zinc finger domain superfamily protein [Zea mays] Length = 324 Score = 98.2 bits (243), Expect(3) = 3e-52 Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 22/194 (11%) Frame = -1 Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAVPP 715 F E+LV + +E+ ++ TCI A EH+++ L + PP Sbjct: 82 FVGIEKLVSNPAEKEHLKTCISRAREHLDEKENEDSVPSNREADTRFLFEGHLTVGQEPP 141 Query: 714 RPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELMEE 535 P VA L L ++ SS +N T RA E+ Sbjct: 142 PPAWLVAQNLTRELSILTESS-------------------GDQDGSNNRTVPRAEEITPA 182 Query: 534 MVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSD 355 ++N + IS R+L +E SLQGI P R+PPASKEV+ NLPVI++TEE+M+RLGS+ Sbjct: 183 IMNLLETISGDRDLETALEESLQGI-IEYPQRAPPASKEVVANLPVIAVTEEVMSRLGSE 241 Query: 354 MQCVVCKENLDISE 313 +C VC+ENL + + Sbjct: 242 TECAVCRENLVVDD 255 Score = 97.8 bits (242), Expect(3) = 3e-52 Identities = 41/52 (78%), Positives = 46/52 (88%) Frame = -2 Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAKSN 78 MQELPCKHLFH LCLKPWLD++NSCP+CRHEL TDDH YES KERERE + + Sbjct: 257 MQELPCKHLFHPLCLKPWLDENNSCPICRHELRTDDHVYESRKEREREEEED 308 Score = 58.2 bits (139), Expect(3) = 3e-52 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = -2 Query: 1103 DEESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQ 924 DE +V+ L+ L + +K F EAV+ A + + Y ASP+L+++ Y +C VA++LQ Sbjct: 7 DEAAVEARLQELRGRLGKKQHFEEAVNELAAAVRDRYAGASPALRKAMYSTVCRVATVLQ 66 Query: 923 TRYTECELWVAGKEL 879 TRYT W G L Sbjct: 67 TRYTAPGFWHVGLNL 81 >ref|XP_002462434.1| hypothetical protein SORBIDRAFT_02g025520 [Sorghum bicolor] gi|241925811|gb|EER98955.1| hypothetical protein SORBIDRAFT_02g025520 [Sorghum bicolor] Length = 324 Score = 99.0 bits (245), Expect(3) = 3e-52 Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 22/194 (11%) Frame = -1 Query: 828 FEEAERLVVDSSERAYMTTCIEIANEHINK----------------------LVMDAVPP 715 F E+LV + +E+ ++ TCI A EH+++ L + PP Sbjct: 82 FMGTEKLVSNPAEKEHLKTCISRAREHLDEKENEDSMPSSREADTRFLFEGHLTVGQEPP 141 Query: 714 RPTLQVANELLATLGVVPGSSQLIXXXXXXXXXXXXXXXXXXXXRGDNNTSQRASELMEE 535 P VA L L ++ SS N T RA E+ Sbjct: 142 PPAWLVAQNLTRELSILTESS-------------------GDQDGNSNRTVPRAEEITPA 182 Query: 534 MVNSMGEISEFRNLIDTIEASLQGIGASRPIRSPPASKEVIENLPVISITEEIMARLGSD 355 ++N + IS R+L +E SLQGI P R+PPASKEV+ NLPVI++TEE++ARLGS+ Sbjct: 183 IMNLLESISGDRDLETALEESLQGI-IEHPPRAPPASKEVVANLPVIAVTEEVIARLGSE 241 Query: 354 MQCVVCKENLDISE 313 +C VC+ENL + + Sbjct: 242 TECAVCRENLVVDD 255 Score = 94.0 bits (232), Expect(3) = 3e-52 Identities = 39/52 (75%), Positives = 45/52 (86%) Frame = -2 Query: 233 MQELPCKHLFHLLCLKPWLDKHNSCPVCRHELPTDDHAYESWKEREREAKSN 78 MQELPCKHLFH CLKPWLD++NSCP+CRHEL TDDH YES KERE+E + + Sbjct: 257 MQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDDHVYESRKEREKEEEED 308 Score = 60.8 bits (146), Expect(3) = 3e-52 Identities = 31/75 (41%), Positives = 45/75 (60%) Frame = -2 Query: 1103 DEESVKESLKYLENEVKEKDTFIEAVSSTKALLTNYYPSASPSLQESFYVCICHVASILQ 924 DE +V+ L+ L + +K F EAV+ A + + Y ASP+L++S Y +C VA++LQ Sbjct: 7 DEAAVEARLQALRQRLGKKQHFEEAVNELAAAVRDRYAGASPTLRKSMYSTVCRVATVLQ 66 Query: 923 TRYTECELWVAGKEL 879 TRYT W AG L Sbjct: 67 TRYTAPGFWRAGLNL 81