BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008236
         (1526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interactin...   602   e-170
ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interactin...   590   e-166
ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interactin...   560   e-157
ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interactin...   542   e-151
ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151

>ref|XP_002281628.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 1
            [Vitis vinifera] gi|297740813|emb|CBI30995.3| unnamed
            protein product [Vitis vinifera]
          Length = 519

 Score =  602 bits (1552), Expect = e-170
 Identities = 292/401 (72%), Positives = 344/401 (85%), Gaps = 1/401 (0%)
 Frame = +3

Query: 276  GRRNLMVADLLQKEQLVDSGRVRRLIASRVQKPEIGDGFRLLVRHRQSVTAVALAEDDMK 455
            G+R+ +VA +LQ+EQL +SGRVRRLIASRVQKPE  D FR+LV+HRQSVTAVAL+EDD+K
Sbjct: 119  GQRDSLVAQILQQEQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLK 178

Query: 456  GFSASKDGTIIQWNVEKGKSEKYIWPTKEVLSSHGAKNPQNPSTKWSKHILALAASSDGR 635
            GFSASKDGTI+QW+V+ GK EKY+WPT+EVL SHGAK+PQ  + K SKH+LALA SSDGR
Sbjct: 179  GFSASKDGTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDGR 238

Query: 636  YLATGGLDRHVHLWDTRTRQHIQAFPGHRGPVSCLTFRQGTSELISGSFDRTIKLWNAED 815
            YLA+GG DRHVHLWDTRTR+H++AFPGHRGPVSCLTFRQGTSEL SGSFDRTIK+W+AED
Sbjct: 239  YLASGGFDRHVHLWDTRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAED 298

Query: 816  RAYMDTLFGHQGEVLTIDCLRKERLLTVGRDRTMRLWKVPEESQLVFRAPATSLECCSFI 995
            RAY+ +LFGHQ EVL+IDCLRKER+LTVGRDR+M+LWKVPEES+LVFRAPA+SLECC FI
Sbjct: 299  RAYITSLFGHQSEVLSIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFI 358

Query: 996  SNDEFLSGSDDGSLELWNTLRKKPAYIIKNAHAAFALDDNCEAKDDAPSNGDYTAENGSK 1175
            +NDEFLSGSDDGS+ELW  LRKKP YI+KNAHA  A     E  D       Y  ENG+ 
Sbjct: 359  NNDEFLSGSDDGSIELWGMLRKKPVYIVKNAHALSATLRQPEQSDVGKIPNGY-IENGNH 417

Query: 1176 KAISY-CTSALSWVGAVTVCRSSDLAASGAGNGVVRLWTVDSDNKRVQPLYDLPLAGFVN 1352
                Y C++A SWV +VTVCRSSDLAASGA NG VRLW + S+ K ++PL++LPL GFVN
Sbjct: 418  NHEDYNCSTAYSWVSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVN 477

Query: 1353 SLAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVLLQSLSI 1475
            SLAF+KSG+FLVAGVGQEPRLGRWGR+PA++NGV +QSL +
Sbjct: 478  SLAFSKSGQFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKL 518


>ref|XP_002281634.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2 isoform 2
            [Vitis vinifera]
          Length = 500

 Score =  590 bits (1522), Expect = e-166
 Identities = 286/400 (71%), Positives = 338/400 (84%)
 Frame = +3

Query: 276  GRRNLMVADLLQKEQLVDSGRVRRLIASRVQKPEIGDGFRLLVRHRQSVTAVALAEDDMK 455
            G+R+ +VA +LQ+EQL +SGRVRRLIASRVQKPE  D FR+LV+HRQSVTAVAL+EDD+K
Sbjct: 119  GQRDSLVAQILQQEQLEESGRVRRLIASRVQKPETVDEFRVLVKHRQSVTAVALSEDDLK 178

Query: 456  GFSASKDGTIIQWNVEKGKSEKYIWPTKEVLSSHGAKNPQNPSTKWSKHILALAASSDGR 635
            GFSASKDGTI+QW+V+ GK EKY+WPT+EVL SHGAK+PQ  + K SKH+LALA SSDGR
Sbjct: 179  GFSASKDGTIVQWDVDSGKGEKYMWPTEEVLKSHGAKDPQGRAMKHSKHVLALAVSSDGR 238

Query: 636  YLATGGLDRHVHLWDTRTRQHIQAFPGHRGPVSCLTFRQGTSELISGSFDRTIKLWNAED 815
            YLA+GG DRHVHLWDTRTR+H++AFPGHRGPVSCLTFRQGTSEL SGSFDRTIK+W+AED
Sbjct: 239  YLASGGFDRHVHLWDTRTREHLRAFPGHRGPVSCLTFRQGTSELFSGSFDRTIKIWSAED 298

Query: 816  RAYMDTLFGHQGEVLTIDCLRKERLLTVGRDRTMRLWKVPEESQLVFRAPATSLECCSFI 995
            RAY+ +LFGHQ EVL+IDCLRKER+LTVGRDR+M+LWKVPEES+LVFRAPA+SLECC FI
Sbjct: 299  RAYITSLFGHQSEVLSIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFI 358

Query: 996  SNDEFLSGSDDGSLELWNTLRKKPAYIIKNAHAAFALDDNCEAKDDAPSNGDYTAENGSK 1175
            +NDEFLSGSDDGS+ELW  LRKKP YI+KNAHA  A     E   +              
Sbjct: 359  NNDEFLSGSDDGSIELWGMLRKKPVYIVKNAHALSATLRQPEQNYN-------------- 404

Query: 1176 KAISYCTSALSWVGAVTVCRSSDLAASGAGNGVVRLWTVDSDNKRVQPLYDLPLAGFVNS 1355
                 C++A SWV +VTVCRSSDLAASGA NG VRLW + S+ K ++PL++LPL GFVNS
Sbjct: 405  -----CSTAYSWVSSVTVCRSSDLAASGAANGSVRLWAIGSETKDIRPLFNLPLVGFVNS 459

Query: 1356 LAFAKSGRFLVAGVGQEPRLGRWGRIPASKNGVLLQSLSI 1475
            LAF+KSG+FLVAGVGQEPRLGRWGR+PA++NGV +QSL +
Sbjct: 460  LAFSKSGQFLVAGVGQEPRLGRWGRLPAARNGVAVQSLKL 499


>ref|XP_004141617.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Cucumis
            sativus]
          Length = 494

 Score =  560 bits (1444), Expect = e-157
 Identities = 276/436 (63%), Positives = 334/436 (76%)
 Frame = +3

Query: 168  KRYRLGMEQLEKFRKKXXXXXXXXXXXXXXXYDGKVGRRNLMVADLLQKEQLVDSGRVRR 347
            KR R+ +E LEK R+                     G ++ +VA +LQ+EQL DSGR+RR
Sbjct: 69   KRKRVAVEYLEKIREIAKREKERGDEEKDEDESDDEGEKDSLVAKILQQEQLEDSGRLRR 128

Query: 348  LIASRVQKPEIGDGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYI 527
             IASRVQKP   D F+LL++HRQSVTAVAL+EDD+KGFS+SKDGTI+ W+VE GK EKY 
Sbjct: 129  EIASRVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESGKGEKYR 188

Query: 528  WPTKEVLSSHGAKNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQA 707
            WP+ EVL  HGAK+PQ  +TK SK   +LA SSDGRYLA+GGLDRHVH+WDTRTR+HIQA
Sbjct: 189  WPSDEVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQA 248

Query: 708  FPGHRGPVSCLTFRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKER 887
            FPGHRGPVSCLTFRQGTSEL SGS+DRT+K+WN +DRAY++TLFGHQ +VLTIDCLRKER
Sbjct: 249  FPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLTIDCLRKER 308

Query: 888  LLTVGRDRTMRLWKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKP 1067
            LLTVGRDR+M+LWKVPEES+LVFRAPA+SLECC FISNDEFLSGSDDGS+ELW  L+KKP
Sbjct: 309  LLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKP 368

Query: 1068 AYIIKNAHAAFALDDNCEAKDDAPSNGDYTAENGSKKAISYCTSALSWVGAVTVCRSSDL 1247
             +I++NAH++ +   N E K++            +    S+  SA SW+ +V+VCR+SDL
Sbjct: 369  VFIVRNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNLSAYSWISSVSVCRNSDL 428

Query: 1248 AASGAGNGVVRLWTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWG 1427
            AASGAGNG VRLW + SD K V+PLYDLPL            GRF+VAGVGQEPRLGRWG
Sbjct: 429  AASGAGNGSVRLWALTSDKKDVRPLYDLPL-----------FGRFVVAGVGQEPRLGRWG 477

Query: 1428 RIPASKNGVLLQSLSI 1475
            RIPA++NGV +  L +
Sbjct: 478  RIPAARNGVAVHPLKL 493


>ref|XP_003535072.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like isoform
            1 [Glycine max]
          Length = 496

 Score =  542 bits (1396), Expect = e-151
 Identities = 273/436 (62%), Positives = 331/436 (75%), Gaps = 1/436 (0%)
 Frame = +3

Query: 171  RYRLGMEQLEKFRKKXXXXXXXXXXXXXXXYDGKVGRRNLMVADLLQKEQLVDSGRVRRL 350
            R RL  + L++ RK                 + + G R+ +VA  L KEQ  +SGRVRR 
Sbjct: 66   RKRLAQDLLQRVRKSAQKGEEEEDDEEE---EDEEGARDSLVAQKLLKEQNEESGRVRRS 122

Query: 351  IASRVQKPEIGDGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYIW 530
            +ASRV K    +GFR+L +HR SVTAVAL+EDD KGFSASKDGTI+QW+V  G+ E+Y W
Sbjct: 123  LASRV-KVSGDEGFRVLAKHRHSVTAVALSEDDSKGFSASKDGTIMQWDVNSGQCERYKW 181

Query: 531  PTKEVLSSHGAKNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQAF 710
            P+  VL SHG K+PQ  +T+ SK +LALAASSDGRYLATGGLDRH+H+WDTRTR+H+Q+F
Sbjct: 182  PSDSVLKSHGLKDPQGSATRQSKQVLALAASSDGRYLATGGLDRHIHIWDTRTREHLQSF 241

Query: 711  PGHRGPVSCLTFRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKERL 890
            PGHRGPVSCLTFRQGTSEL SGSFDRTIK+WN EDR YM TLFGHQ EVL+IDCLRKER+
Sbjct: 242  PGHRGPVSCLTFRQGTSELFSGSFDRTIKIWNVEDRTYMSTLFGHQSEVLSIDCLRKERV 301

Query: 891  LTVGRDRTMRLWKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKPA 1070
            LT GRDR+M+L+KV EES+LVFRAPA+SLECC F+ NDE  SGSDDGS+ELW  +RKKP 
Sbjct: 302  LTAGRDRSMQLFKVHEESRLVFRAPASSLECCCFVGNDELFSGSDDGSIELWTVMRKKPI 361

Query: 1071 YIIKNAHAAFALDDNCEAKDDAPSNGDYTAENG-SKKAISYCTSALSWVGAVTVCRSSDL 1247
            YI++NAH A  +D     + D+    +   ENG +     +C S  SWV AV+VCR+SDL
Sbjct: 362  YILRNAH-ALPVDSMKSDQKDSEKLPNGNLENGYNHPKDHHCLSVFSWVSAVSVCRNSDL 420

Query: 1248 AASGAGNGVVRLWTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWG 1427
            AASGAGNG VRLW ++SD K ++ L ++PLAGFVNSLAFAKSG FLVAGVGQEPRLGRWG
Sbjct: 421  AASGAGNGSVRLWEIESDTKDIKSLCNVPLAGFVNSLAFAKSGEFLVAGVGQEPRLGRWG 480

Query: 1428 RIPASKNGVLLQSLSI 1475
            R P ++NGV +  L +
Sbjct: 481  RNPEARNGVSILPLKL 496


>ref|XP_002306239.1| predicted protein [Populus trichocarpa] gi|222855688|gb|EEE93235.1|
            predicted protein [Populus trichocarpa]
          Length = 502

 Score =  540 bits (1392), Expect = e-151
 Identities = 265/437 (60%), Positives = 331/437 (75%)
 Frame = +3

Query: 168  KRYRLGMEQLEKFRKKXXXXXXXXXXXXXXXYDGKVGRRNLMVADLLQKEQLVDSGRVRR 347
            KR R+    +E  R +               ++ K G R+  VA  L ++QL +SGR+RR
Sbjct: 81   KRQRIAKAVVENLRAREKELEGEEDEEGDREFE-KEGERDSSVAKKLMQQQLEESGRLRR 139

Query: 348  LIASRVQKPEIGDGFRLLVRHRQSVTAVALAEDDMKGFSASKDGTIIQWNVEKGKSEKYI 527
             IASRVQKPE  DGF +LV+HRQSVTAV L++DD KGFSASKDGTI+ W+V+ GK+EKY 
Sbjct: 140  AIASRVQKPESVDGFEVLVKHRQSVTAVCLSDDDSKGFSASKDGTILHWDVDSGKAEKYQ 199

Query: 528  WPTKEVLSSHGAKNPQNPSTKWSKHILALAASSDGRYLATGGLDRHVHLWDTRTRQHIQA 707
            WP  E+L SHGAKNP+  +TK S+++LALA S+DGRYLA+GGLDRHVHLWDTRTR+HIQA
Sbjct: 200  WPNDEILRSHGAKNPEGRATKHSRNVLALAVSTDGRYLASGGLDRHVHLWDTRTREHIQA 259

Query: 708  FPGHRGPVSCLTFRQGTSELISGSFDRTIKLWNAEDRAYMDTLFGHQGEVLTIDCLRKER 887
            FPGH+GPVSCLTFR+G+SEL SGS+DR+IK+WN EDRAYM+TLFGHQ E+LTIDCL +ER
Sbjct: 260  FPGHKGPVSCLTFRKGSSELFSGSYDRSIKIWNVEDRAYMNTLFGHQSELLTIDCLWQER 319

Query: 888  LLTVGRDRTMRLWKVPEESQLVFRAPATSLECCSFISNDEFLSGSDDGSLELWNTLRKKP 1067
            +L VGRDR+M+L+KV +ES+L+FR+  +SLECC FI N EF+SGSDDG++ELW+  +KKP
Sbjct: 320  VLAVGRDRSMQLFKVHDESRLIFRSSTSSLECCCFIDNSEFVSGSDDGNIELWSVQKKKP 379

Query: 1068 AYIIKNAHAAFALDDNCEAKDDAPSNGDYTAENGSKKAISYCTSALSWVGAVTVCRSSDL 1247
             YI+KNAH +    +N E KD+  +   + A               SWV +V VCR SDL
Sbjct: 380  VYIVKNAHTSSTDVNNGELKDNGRNYNGHVAS--------------SWVSSVGVCRGSDL 425

Query: 1248 AASGAGNGVVRLWTVDSDNKRVQPLYDLPLAGFVNSLAFAKSGRFLVAGVGQEPRLGRWG 1427
            AASGAGNG VRLW V+   K ++PLYDLPL GFVNSLAFAKSG+FL+AGVGQEPRLGRWG
Sbjct: 426  AASGAGNGSVRLWAVEGAGKGIRPLYDLPLTGFVNSLAFAKSGKFLLAGVGQEPRLGRWG 485

Query: 1428 RIPASKNGVLLQSLSIL 1478
               A++NGV +Q L +L
Sbjct: 486  HNSAARNGVAIQQLKLL 502