BLASTX nr result
ID: Coptis24_contig00008213
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008213 (489 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264... 92 5e-24 emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera] 92 7e-24 ref|XP_002313737.1| predicted protein [Populus trichocarpa] gi|2... 89 3e-19 ref|XP_002528258.1| conserved hypothetical protein [Ricinus comm... 82 5e-17 ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796... 79 2e-15 >ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera] Length = 1983 Score = 92.0 bits (227), Expect(3) = 5e-24 Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%) Frame = -3 Query: 406 CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227 C LS+ +DLIL GFLT +TW PIIQ+HL+LQ ++ KL+++ S +PIIL+FLLTLAR+ Sbjct: 1521 CVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQDKSSLASIPIILRFLLTLARV 1580 Query: 226 R-GAEMLQTANFFLS 185 R GAEML TA FF S Sbjct: 1581 RGGAEMLLTAGFFSS 1595 Score = 35.4 bits (80), Expect(3) = 5e-24 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = -2 Query: 74 GLGLTVVTAMIYSLGGSLSCVDFV 3 GLGL VVTA+I+SLGGS CV+ V Sbjct: 1633 GLGLAVVTAIIHSLGGSSLCVNTV 1656 Score = 28.5 bits (62), Expect(3) = 5e-24 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 195 FFSLKVLINILLDQKTVFSVQDGSGVPISTGEDEKRQHIWGTWL 64 F SL+VL L + +Q+G+ S+ EK QH+WG L Sbjct: 1593 FSSLRVLFADLSAGRPFSVIQNGTSHSNSSENFEKPQHVWGLGL 1636 >emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera] Length = 1391 Score = 91.7 bits (226), Expect(3) = 7e-24 Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%) Frame = -3 Query: 406 CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227 C LS+ +DLIL GFLT +TW PIIQ+HL+LQ ++ KL+++ S +PIIL+FLLTLAR+ Sbjct: 929 CVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQDKSSLASIPIILRFLLTLARV 988 Query: 226 R-GAEMLQTANFFLS 185 R GAEML TA FF S Sbjct: 989 RGGAEMLLTAXFFSS 1003 Score = 35.4 bits (80), Expect(3) = 7e-24 Identities = 17/24 (70%), Positives = 20/24 (83%) Frame = -2 Query: 74 GLGLTVVTAMIYSLGGSLSCVDFV 3 GLGL VVTA+I+SLGGS CV+ V Sbjct: 1041 GLGLAVVTAIIHSLGGSSLCVNTV 1064 Score = 28.5 bits (62), Expect(3) = 7e-24 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 195 FFSLKVLINILLDQKTVFSVQDGSGVPISTGEDEKRQHIWGTWL 64 F SL+VL L + +Q+G+ S+ EK QH+WG L Sbjct: 1001 FSSLRVLFADLSAGRPFSVIQNGTSHSNSSENFEKPQHVWGLGL 1044 >ref|XP_002313737.1| predicted protein [Populus trichocarpa] gi|222850145|gb|EEE87692.1| predicted protein [Populus trichocarpa] Length = 450 Score = 88.6 bits (218), Expect(2) = 3e-19 Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Frame = -3 Query: 487 DKKS---AEVSXXXXXXXXXXXXCTEIVDCCNLSVALMDLILNGFLTSSTWLPIIQKHLR 317 DK+S AEVS C + +LS+A +DL+L FLT +TW PIIQKHL+ Sbjct: 59 DKESEDFAEVSNGCLGLLPTLCNCITATEHSSLSLATIDLVLTSFLTPNTWFPIIQKHLQ 118 Query: 316 LQLVIQKLRERDSFPCVPIILKFLLTLARIR-GAEMLQTANFFLS 185 L VI K+ ++ SF VPI LKFLLTLAR+R GAEML +A+FF S Sbjct: 119 LPHVILKVHDKSSFSSVPITLKFLLTLARVRGGAEMLLSADFFSS 163 Score = 31.2 bits (69), Expect(2) = 3e-19 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -2 Query: 122 GFQSQQVKMKSVSIYGGLGLTVVTAMIYSLGGSLSCVDFV 3 GF K++ GLGL V+ AM+ SLG S S D + Sbjct: 185 GFLKSSDKIEKPQSIWGLGLAVIVAMVQSLGDSSSYTDIL 224 >ref|XP_002528258.1| conserved hypothetical protein [Ricinus communis] gi|223532295|gb|EEF34096.1| conserved hypothetical protein [Ricinus communis] Length = 1783 Score = 81.6 bits (200), Expect(2) = 5e-17 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = -3 Query: 406 CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227 C LS+ +DLIL FLT TW PIIQKHL+L VI KL E +S +PI LKFLLTLAR+ Sbjct: 1321 CGLSLTTIDLILKSFLTPKTWFPIIQKHLQLLHVILKLHEDNSPASIPIKLKFLLTLARV 1380 Query: 226 R-GAEMLQTANFFLS 185 R GAE+L +A F S Sbjct: 1381 REGAELLLSAGFLSS 1395 Score = 30.8 bits (68), Expect(2) = 5e-17 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = -1 Query: 189 SLKVLINILLDQKTVFSVQDGSGVPISTGEDEKRQHIWGTWL 64 SL+VL LLD + G S+ +D+K QHIWG L Sbjct: 1395 SLQVLFGNLLDGRPSTMTVSNIGFLKSSEKDDKSQHIWGLGL 1436 >ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max] Length = 1969 Score = 79.3 bits (194), Expect(2) = 2e-15 Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%) Frame = -3 Query: 406 CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227 C LS+++MDLIL FLT TWLP++Q HL+L +V+ KL +++S +PII+KF LTLAR+ Sbjct: 1514 CMLSLSVMDLILRRFLTPRTWLPVLQNHLQLPIVMLKLHDKNS-ASIPIIMKFFLTLARV 1572 Query: 226 R-GAEMLQTANFFLS 185 R GAEML + F S Sbjct: 1573 RGGAEMLYCSGFLSS 1587 Score = 27.3 bits (59), Expect(2) = 2e-15 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -2 Query: 74 GLGLTVVTAMIYSLGGSLS 18 GLGL VVTAM+ SLG + S Sbjct: 1622 GLGLAVVTAMVKSLGDNSS 1640