BLASTX nr result

ID: Coptis24_contig00008213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008213
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...    92   5e-24
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]    92   7e-24
ref|XP_002313737.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-19
ref|XP_002528258.1| conserved hypothetical protein [Ricinus comm...    82   5e-17
ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...    79   2e-15

>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score = 92.0 bits (227), Expect(3) = 5e-24
 Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = -3

Query: 406  CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227
            C LS+  +DLIL GFLT +TW PIIQ+HL+LQ ++ KL+++ S   +PIIL+FLLTLAR+
Sbjct: 1521 CVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQDKSSLASIPIILRFLLTLARV 1580

Query: 226  R-GAEMLQTANFFLS 185
            R GAEML TA FF S
Sbjct: 1581 RGGAEMLLTAGFFSS 1595



 Score = 35.4 bits (80), Expect(3) = 5e-24
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 74   GLGLTVVTAMIYSLGGSLSCVDFV 3
            GLGL VVTA+I+SLGGS  CV+ V
Sbjct: 1633 GLGLAVVTAIIHSLGGSSLCVNTV 1656



 Score = 28.5 bits (62), Expect(3) = 5e-24
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 195  FFSLKVLINILLDQKTVFSVQDGSGVPISTGEDEKRQHIWGTWL 64
            F SL+VL   L   +    +Q+G+    S+   EK QH+WG  L
Sbjct: 1593 FSSLRVLFADLSAGRPFSVIQNGTSHSNSSENFEKPQHVWGLGL 1636


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score = 91.7 bits (226), Expect(3) = 7e-24
 Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = -3

Query: 406  CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227
            C LS+  +DLIL GFLT +TW PIIQ+HL+LQ ++ KL+++ S   +PIIL+FLLTLAR+
Sbjct: 929  CVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQDKSSLASIPIILRFLLTLARV 988

Query: 226  R-GAEMLQTANFFLS 185
            R GAEML TA FF S
Sbjct: 989  RGGAEMLLTAXFFSS 1003



 Score = 35.4 bits (80), Expect(3) = 7e-24
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 74   GLGLTVVTAMIYSLGGSLSCVDFV 3
            GLGL VVTA+I+SLGGS  CV+ V
Sbjct: 1041 GLGLAVVTAIIHSLGGSSLCVNTV 1064



 Score = 28.5 bits (62), Expect(3) = 7e-24
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -1

Query: 195  FFSLKVLINILLDQKTVFSVQDGSGVPISTGEDEKRQHIWGTWL 64
            F SL+VL   L   +    +Q+G+    S+   EK QH+WG  L
Sbjct: 1001 FSSLRVLFADLSAGRPFSVIQNGTSHSNSSENFEKPQHVWGLGL 1044


>ref|XP_002313737.1| predicted protein [Populus trichocarpa] gi|222850145|gb|EEE87692.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 88.6 bits (218), Expect(2) = 3e-19
 Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
 Frame = -3

Query: 487 DKKS---AEVSXXXXXXXXXXXXCTEIVDCCNLSVALMDLILNGFLTSSTWLPIIQKHLR 317
           DK+S   AEVS            C    +  +LS+A +DL+L  FLT +TW PIIQKHL+
Sbjct: 59  DKESEDFAEVSNGCLGLLPTLCNCITATEHSSLSLATIDLVLTSFLTPNTWFPIIQKHLQ 118

Query: 316 LQLVIQKLRERDSFPCVPIILKFLLTLARIR-GAEMLQTANFFLS 185
           L  VI K+ ++ SF  VPI LKFLLTLAR+R GAEML +A+FF S
Sbjct: 119 LPHVILKVHDKSSFSSVPITLKFLLTLARVRGGAEMLLSADFFSS 163



 Score = 31.2 bits (69), Expect(2) = 3e-19
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -2

Query: 122 GFQSQQVKMKSVSIYGGLGLTVVTAMIYSLGGSLSCVDFV 3
           GF     K++      GLGL V+ AM+ SLG S S  D +
Sbjct: 185 GFLKSSDKIEKPQSIWGLGLAVIVAMVQSLGDSSSYTDIL 224


>ref|XP_002528258.1| conserved hypothetical protein [Ricinus communis]
            gi|223532295|gb|EEF34096.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1783

 Score = 81.6 bits (200), Expect(2) = 5e-17
 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = -3

Query: 406  CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227
            C LS+  +DLIL  FLT  TW PIIQKHL+L  VI KL E +S   +PI LKFLLTLAR+
Sbjct: 1321 CGLSLTTIDLILKSFLTPKTWFPIIQKHLQLLHVILKLHEDNSPASIPIKLKFLLTLARV 1380

Query: 226  R-GAEMLQTANFFLS 185
            R GAE+L +A F  S
Sbjct: 1381 REGAELLLSAGFLSS 1395



 Score = 30.8 bits (68), Expect(2) = 5e-17
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -1

Query: 189  SLKVLINILLDQKTVFSVQDGSGVPISTGEDEKRQHIWGTWL 64
            SL+VL   LLD +         G   S+ +D+K QHIWG  L
Sbjct: 1395 SLQVLFGNLLDGRPSTMTVSNIGFLKSSEKDDKSQHIWGLGL 1436


>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score = 79.3 bits (194), Expect(2) = 2e-15
 Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -3

Query: 406  CNLSVALMDLILNGFLTSSTWLPIIQKHLRLQLVIQKLRERDSFPCVPIILKFLLTLARI 227
            C LS+++MDLIL  FLT  TWLP++Q HL+L +V+ KL +++S   +PII+KF LTLAR+
Sbjct: 1514 CMLSLSVMDLILRRFLTPRTWLPVLQNHLQLPIVMLKLHDKNS-ASIPIIMKFFLTLARV 1572

Query: 226  R-GAEMLQTANFFLS 185
            R GAEML  + F  S
Sbjct: 1573 RGGAEMLYCSGFLSS 1587



 Score = 27.3 bits (59), Expect(2) = 2e-15
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 74   GLGLTVVTAMIYSLGGSLS 18
            GLGL VVTAM+ SLG + S
Sbjct: 1622 GLGLAVVTAMVKSLGDNSS 1640


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