BLASTX nr result

ID: Coptis24_contig00008206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008206
         (1580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [C...   675   0.0  
ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   674   0.0  
dbj|BAE48664.1| Pectate lyase [Prunus mume]                           667   0.0  
gb|AAQ84042.1| pectate lyase [Malus x domestica]                      667   0.0  
gb|ABV32549.1| pectase lyase [Prunus persica]                         666   0.0  

>ref|XP_004152502.1| PREDICTED: probable pectate lyase 22-like [Cucumis sativus]
          Length = 413

 Score =  675 bits (1742), Expect = 0.0
 Identities = 319/381 (83%), Positives = 341/381 (89%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1458 VQNPDLVAQEVVSKINNST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 1282
            V NP+LV QEV   I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 1281 KQAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 1102
            K A+GGRDG+IYVVTDSG+DDPV PKPGTLR+AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 1101 FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPSHFGFRTLSDG 922
            FKTIDGRGASVHIAGGPCITIQ+VTNIIIHGL+IHDC QGGNT+VRDSP HFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 921  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 742
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSD+YTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 741  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 562
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 561  PNNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXARPS 382
            PN+  SKE+TK+EDAP  EWKNW+WRSEGDL LNGA+FT                 ARPS
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTASGAGASSSYARASSLGARPS 392

Query: 381  ALVAPLTTAAGALNCRKGSRC 319
            +LV  +TT AGALNCRKGSRC
Sbjct: 393  SLVGTITTNAGALNCRKGSRC 413


>ref|XP_004157771.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 22-like
            [Cucumis sativus]
          Length = 413

 Score =  674 bits (1739), Expect = 0.0
 Identities = 319/381 (83%), Positives = 340/381 (89%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1458 VQNPDLVAQEVVSKINNST-RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 1282
            V NP+LV QEV   I N+T RRNLGYLSCGTGNPIDDCWRCD NWEKNRQRLADC IGFG
Sbjct: 33   VSNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWEKNRQRLADCGIGFG 92

Query: 1281 KQAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 1102
            K A+GGRDG IYVVTDSG+DDPV PKPGTLR+AVIQDEPLWIIF RDMVI+LKEELIMNS
Sbjct: 93   KNAIGGRDGXIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNS 152

Query: 1101 FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPSHFGFRTLSDG 922
            FKTIDGRGASVHIAGGPCITIQ+VTNIIIHGL+IHDC QGGNT+VRDSP HFGFRT+SDG
Sbjct: 153  FKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQGGNTDVRDSPRHFGFRTISDG 212

Query: 921  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 742
            DGVSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISNNY+THH+KVMLLGHSD+YTQD
Sbjct: 213  DGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQD 272

Query: 741  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 562
            KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRF+A
Sbjct: 273  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVA 332

Query: 561  PNNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXARPS 382
            PN+  SKE+TK+EDAP  EWKNW+WRSEGDL LNGA+FT                 ARPS
Sbjct: 333  PNDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAYFTASGAGASSSYARASSLGARPS 392

Query: 381  ALVAPLTTAAGALNCRKGSRC 319
            +LV  +TT AGALNCRKGSRC
Sbjct: 393  SLVGTITTNAGALNCRKGSRC 413


>dbj|BAE48664.1| Pectate lyase [Prunus mume]
          Length = 413

 Score =  667 bits (1722), Expect = 0.0
 Identities = 311/380 (81%), Positives = 339/380 (89%), Gaps = 1/380 (0%)
 Frame = -3

Query: 1455 QNPDLVAQEVVSKINNS-TRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 1279
            QNP+LV Q+V   IN+S +RRNLGYLSCGTGNPIDDCWRCDPNWE+NR+RLADCAIGFGK
Sbjct: 34   QNPELVVQDVQRSINDSVSRRNLGYLSCGTGNPIDDCWRCDPNWEQNRERLADCAIGFGK 93

Query: 1278 QAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNSF 1099
             AVGGRDG+IYVVTDSG+ DPV PKPGTLRHAVIQDEPLWIIF+RDM I+LKEELIMNSF
Sbjct: 94   NAVGGRDGKIYVVTDSGDSDPVNPKPGTLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSF 153

Query: 1098 KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPSHFGFRTLSDGD 919
            KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDC QGGN  VR SP H+G+RT+SDGD
Sbjct: 154  KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCKQGGNAMVRSSPEHYGWRTISDGD 213

Query: 918  GVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQDK 739
            GVSIFGGSHVWVDHCSLSNC+DGL+DAIHGSTAITISNNY+THH+KVMLLGHSD+YT+DK
Sbjct: 214  GVSIFGGSHVWVDHCSLSNCKDGLVDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTEDK 273

Query: 738  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAP 559
            NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF AP
Sbjct: 274  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFAAP 333

Query: 558  NNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXARPSA 379
            +   SKE+TKHEDAP  EW+NWNWRSEGDL +NGAFFT                 A+PS+
Sbjct: 334  DIRFSKEVTKHEDAPESEWRNWNWRSEGDLMINGAFFTASGAGASSSYARASSLGAKPSS 393

Query: 378  LVAPLTTAAGALNCRKGSRC 319
            LV  +TTA+GAL+CRKGSRC
Sbjct: 394  LVGSITTASGALSCRKGSRC 413


>gb|AAQ84042.1| pectate lyase [Malus x domestica]
          Length = 418

 Score =  667 bits (1722), Expect = 0.0
 Identities = 312/381 (81%), Positives = 339/381 (88%), Gaps = 1/381 (0%)
 Frame = -3

Query: 1458 VQNPDLVAQEVVSKINNS-TRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFG 1282
            +Q+P+LV QEV   I++S +RRNLGYLSCGTGNPIDDCWRCDPNWEKNRQ LADCAIGFG
Sbjct: 38   LQDPELVVQEVQRNISDSVSRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQSLADCAIGFG 97

Query: 1281 KQAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNS 1102
            K A+GGRDG+IYVVTDSG+DDPV PKPGTLRHAVIQDEPLWIIF+RDM I+LKEELIMNS
Sbjct: 98   KNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFQRDMTIQLKEELIMNS 157

Query: 1101 FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPSHFGFRTLSDG 922
            FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDC QGGN  VR SP HFG+RT+SDG
Sbjct: 158  FKTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCKQGGNAMVRSSPRHFGWRTVSDG 217

Query: 921  DGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQD 742
            DGVSIFGGSHVWVDHCSLSNC+DGL+DAI+GSTAITISNNY+THH+KVMLLGHSD+YT D
Sbjct: 218  DGVSIFGGSHVWVDHCSLSNCKDGLVDAIYGSTAITISNNYMTHHDKVMLLGHSDSYTND 277

Query: 741  KNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLA 562
            KNMQ+TIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF A
Sbjct: 278  KNMQITIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRFAA 337

Query: 561  PNNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXARPS 382
            P+   SKE+TKHEDAP  EWKNWNWRSEGDL LNGAFFT                 A+PS
Sbjct: 338  PDIRSSKEVTKHEDAPESEWKNWNWRSEGDLMLNGAFFTASGAGASSSYARASSLGAKPS 397

Query: 381  ALVAPLTTAAGALNCRKGSRC 319
            +LV  +TTA+GAL+CRKGSRC
Sbjct: 398  SLVGAITTASGALSCRKGSRC 418


>gb|ABV32549.1| pectase lyase [Prunus persica]
          Length = 413

 Score =  666 bits (1718), Expect = 0.0
 Identities = 309/380 (81%), Positives = 339/380 (89%), Gaps = 1/380 (0%)
 Frame = -3

Query: 1455 QNPDLVAQEVVSKINNS-TRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGK 1279
            QNP+LV Q+V   IN+S +RRNLGYLSCGTGNPIDDCWRCDPNWE+NRQRLADCAIGFGK
Sbjct: 34   QNPELVVQDVQRSINDSVSRRNLGYLSCGTGNPIDDCWRCDPNWEQNRQRLADCAIGFGK 93

Query: 1278 QAVGGRDGRIYVVTDSGNDDPVTPKPGTLRHAVIQDEPLWIIFERDMVIKLKEELIMNSF 1099
             A+GGRDG+IYVVTDSG++DPV PKPGTLRHAVIQDEPLWIIF+RDM I+LKEELIMNSF
Sbjct: 94   NAIGGRDGKIYVVTDSGDNDPVNPKPGTLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSF 153

Query: 1098 KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCTQGGNTNVRDSPSHFGFRTLSDGD 919
            KTIDGRGASVHIAGGPCIT+QFVTNIIIHGLHIHDC  GGN  VR SP H+G+RT+SDGD
Sbjct: 154  KTIDGRGASVHIAGGPCITVQFVTNIIIHGLHIHDCKPGGNAMVRSSPEHYGWRTISDGD 213

Query: 918  GVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYLTHHNKVMLLGHSDTYTQDK 739
            GVSIFGGSHVWVDHCSLSNC+DGL+DAIHGSTAITISNNY+THH+KVMLLGHSD+YT+DK
Sbjct: 214  GVSIFGGSHVWVDHCSLSNCKDGLVDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTEDK 273

Query: 738  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAP 559
            NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF AP
Sbjct: 274  NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFAAP 333

Query: 558  NNMDSKEITKHEDAPVYEWKNWNWRSEGDLYLNGAFFTRXXXXXXXXXXXXXXXXARPSA 379
            +   SKE+TKHEDAP  EW+NWNWRSEGDL +NGAFFT                 A+PS+
Sbjct: 334  DIRFSKEVTKHEDAPESEWRNWNWRSEGDLMINGAFFTASGAGASSSYARASSLGAKPSS 393

Query: 378  LVAPLTTAAGALNCRKGSRC 319
            LV  +TTA+GAL+CRKGSRC
Sbjct: 394  LVGSITTASGALSCRKGSRC 413


Top