BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008205
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]   280   5e-73
ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Viti...   277   3e-72
ref|XP_002511792.1| ring finger protein, putative [Ricinus commu...   275   1e-71
ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|2...   248   2e-63
ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like...   246   6e-63

>emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
          Length = 224

 Score =  280 bits (715), Expect = 5e-73
 Identities = 136/198 (68%), Positives = 156/198 (78%), Gaps = 2/198 (1%)
 Frame = +3

Query: 180 GPEMFGSGMNLITTVIGFGMSATFILFVCTRLICGRMRAADSREAFEVDSSTDIEQPEQR 359
           G EM G GMNLITTVIGFGMSATFI+FVCTRLICGR+R  +SR+ FE+DS  D+EQPE R
Sbjct: 21  GLEMLG-GMNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQPEHR 79

Query: 360 SGGLEPIVVASLPTMKFNHEAFESVEDAQCSICLGEYQEKEILRIIPKCGHIFHVSCVDL 539
             GLEP++VA++PTMKFN EAF SVEDAQCSICLGEYQEKE+LRI+PKCGH FH+SC+D+
Sbjct: 80  ISGLEPVMVAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDV 139

Query: 540 WLHKQSTCPVCRLPLQDSFEKIQMRSPR--SGMLIDSPEIMGDHSQQWLLPGPDRSVHNG 713
           WL KQSTCPVCRL LQDSFE   +R     +   +DSPEI  D S QWLLPGP+RSV NG
Sbjct: 140 WLRKQSTCPVCRLSLQDSFETKHVRPEAFDTAQSVDSPEISVDRSHQWLLPGPERSVENG 199

Query: 714 NNLAQMESITGNSAPSVS 767
            N    ESI G   P+ S
Sbjct: 200 TNQVHHESIPGYPEPAQS 217


>ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
           gi|296089077|emb|CBI38780.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score =  277 bits (708), Expect = 3e-72
 Identities = 132/191 (69%), Positives = 152/191 (79%), Gaps = 2/191 (1%)
 Frame = +3

Query: 201 GMNLITTVIGFGMSATFILFVCTRLICGRMRAADSREAFEVDSSTDIEQPEQRSGGLEPI 380
           GMNLITTVIGFGMSATFI+FVCTRLICGR+R  +SR+ FE+DS  D+EQPE R  GLEP+
Sbjct: 4   GMNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQPEHRISGLEPV 63

Query: 381 VVASLPTMKFNHEAFESVEDAQCSICLGEYQEKEILRIIPKCGHIFHVSCVDLWLHKQST 560
           +VA++PTMKFN EAF SVEDAQCSICLGEYQEKE+LRI+PKCGH FH+SC+D+WL KQST
Sbjct: 64  MVAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQST 123

Query: 561 CPVCRLPLQDSFEKIQMRSPR--SGMLIDSPEIMGDHSQQWLLPGPDRSVHNGNNLAQME 734
           CPVCRL LQDSFE   +R     +   +DSPEI  D S QWLLPGP+RSV NG N    E
Sbjct: 124 CPVCRLSLQDSFETKHVRPEAFDTAQSVDSPEISVDRSHQWLLPGPERSVENGTNQVHHE 183

Query: 735 SITGNSAPSVS 767
           SI G   P+ S
Sbjct: 184 SIPGYPEPAQS 194


>ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
           gi|223548972|gb|EEF50461.1| ring finger protein,
           putative [Ricinus communis]
          Length = 201

 Score =  275 bits (703), Expect = 1e-71
 Identities = 125/193 (64%), Positives = 158/193 (81%), Gaps = 2/193 (1%)
 Frame = +3

Query: 189 MFGSGMNLITTVIGFGMSATFILFVCTRLICGRMRAADSREAFEVDSSTDIEQPEQRSGG 368
           M GSGMNLITTVIGFGMSATFI+FVCTR+ICGR+RA++SR+ FE++S  D++QPE +  G
Sbjct: 1   MLGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRASESRQTFELESRIDLDQPEHQISG 60

Query: 369 LEPIVVASLPTMKFNHEAFESVEDAQCSICLGEYQEKEILRIIPKCGHIFHVSCVDLWLH 548
           LEP++VA++PTMKFN EAF +VEDAQCSICLGEYQEKE+LRI+PKCGH FH+SC+D+WL 
Sbjct: 61  LEPVMVAAIPTMKFNREAFTAVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLR 120

Query: 549 KQSTCPVCRLPLQDSFEKIQMRSPRSGML--IDSPEIMGDHSQQWLLPGPDRSVHNGNNL 722
           KQSTCPVCR P+QD+ E   MR     M+  IDSPE   +HS+QWLLPGPDRS+ N +N 
Sbjct: 121 KQSTCPVCRFPIQDTLEAKHMRQATMSMVRSIDSPETSTEHSRQWLLPGPDRSMGNASNQ 180

Query: 723 AQMESITGNSAPS 761
             +  ++G+  P+
Sbjct: 181 EHLVPVSGSPEPA 193


>ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|222843046|gb|EEE80593.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  248 bits (632), Expect = 2e-63
 Identities = 115/195 (58%), Positives = 146/195 (74%), Gaps = 2/195 (1%)
 Frame = +3

Query: 204 MNLITTVIGFGMSATFILFVCTRLICGRMRAADSREAFEVDSSTDIEQPEQRSGGLEPIV 383
           MNLITT IGFGMSATFI+FVC R+ICGR+R  +SR+ FE++S  D EQPE R GGLEP++
Sbjct: 1   MNLITTAIGFGMSATFIVFVCARIICGRIRGTESRQMFEIESRIDPEQPEHRIGGLEPVL 60

Query: 384 VASLPTMKFNHEAFESVEDAQCSICLGEYQEKEILRIIPKCGHIFHVSCVDLWLHKQSTC 563
           +A++PT++F HE F S EDAQCSICLGEYQEKE+LRI+P CGH FH+SC+D+WL KQSTC
Sbjct: 61  LAAIPTLRFTHEEFSSAEDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVWLRKQSTC 120

Query: 564 PVCRLPLQDSFEKIQMRSPRSGML--IDSPEIMGDHSQQWLLPGPDRSVHNGNNLAQMES 737
           PVCR P+QDSFE   MR     M+  IDSP+   + S+QWLLP    S  N +N   ++ 
Sbjct: 121 PVCRFPIQDSFEAKHMRQTAISMVQSIDSPDTRSEQSRQWLLPSYQGSAGNHSNERHLDP 180

Query: 738 ITGNSAPSVSRGRNQ 782
           + GN  P ++ G +Q
Sbjct: 181 VPGN--PEITPGESQ 193


>ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
           gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
           gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
          Length = 203

 Score =  246 bits (628), Expect = 6e-63
 Identities = 121/194 (62%), Positives = 150/194 (77%), Gaps = 5/194 (2%)
 Frame = +3

Query: 189 MFGSGMNLITTVIGFGMSATFILFVCTRLICGRMRAADSREA-FEVDSSTDIEQ-PEQRS 362
           M GSGMNLITTVIGFGMSATFI+FVCTR+ICGR+R+A S    +E++S  D+EQ PE R+
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 363 GGLEPIVVASLPTMKFNHEAFESVEDAQCSICLGEYQEKEILRIIPKCGHIFHVSCVDLW 542
            GLEP+++A++PTM F+ EAF S+EDAQCSICLGEY+EKE+LRI+PKCGH FH++C+D+W
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 543 LHKQSTCPVCRLPLQDSFEKIQMR--SPRSGMLIDSPEIMGD-HSQQWLLPGPDRSVHNG 713
           L KQSTCPVCRLPLQDSF     R  +       D  EI  D HSQ WLLPGP+RS  N 
Sbjct: 121 LRKQSTCPVCRLPLQDSFRTKPARPMTVSRDQSFDGSEISTDHHSQHWLLPGPNRSEGNT 180

Query: 714 NNLAQMESITGNSA 755
           +N +Q++ I  N A
Sbjct: 181 SNQSQLQPIPVNPA 194