BLASTX nr result
ID: Coptis24_contig00008201
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008201
(1768 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511095.1| Signal recognition particle 68 kDa protein, ... 577 0.0
ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|2... 557 0.0
ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|2... 559 0.0
ref|XP_004154654.1| PREDICTED: signal recognition particle 68 kD... 541 0.0
ref|XP_004139127.1| PREDICTED: signal recognition particle 68 kD... 538 0.0
>ref|XP_002511095.1| Signal recognition particle 68 kDa protein, putative [Ricinus
communis] gi|223550210|gb|EEF51697.1| Signal recognition
particle 68 kDa protein, putative [Ricinus communis]
Length = 594
Score = 577 bits (1487), Expect(2) = 0.0
Identities = 285/385 (74%), Positives = 343/385 (89%)
Frame = -1
Query: 1243 CLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASVTEFRWLGHRFPI 1064
C HK+G+ N++T +LL IG+MEGPALDLFK KLEAVM EARSQQAAS+TEF WLGH+FPI
Sbjct: 209 CRHKIGQSNLQTSDLLQIGEMEGPALDLFKTKLEAVMAEARSQQAASLTEFHWLGHKFPI 268
Query: 1063 SNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARSCIRTDLVTAGNA 884
SNAKTRV ILKAQELEK++HGSAADSLPAEKKLV+FDKIFAAYH+ARSCIR+DLV+AGNA
Sbjct: 269 SNAKTRVAILKAQELEKDLHGSAADSLPAEKKLVVFDKIFAAYHEARSCIRSDLVSAGNA 328
Query: 883 ENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKGTKPEGLVRLYDL 704
++VKDDL+GLDKAVSAVLGQRTIERNQLLVSIAKSK ++ DD+ K T+PE LVRLYDL
Sbjct: 329 DSVKDDLSGLDKAVSAVLGQRTIERNQLLVSIAKSKFIKRRDDKNEKLTRPEELVRLYDL 388
Query: 703 LIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSYSLAGKRTEAYAL 524
L+QNT+DL+DLVSSGRD K EEVAF+E+ ALR L F+A+RCFYLAKSYSLAGKRTEAY+L
Sbjct: 389 LLQNTSDLSDLVSSGRDTKPEEVAFSEDCALRSLAFRAQRCFYLAKSYSLAGKRTEAYSL 448
Query: 523 YCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGIMEEVKAPEKLSE 344
YCRAR++ ++ALQK +S++ D++M++ELK L N+CRSN CIEHA+GIME+ KAPE LS+
Sbjct: 449 YCRARSLSENALQKFQSLNNTDEIMVKELKTLYNECRSNSCIEHASGIMEDEKAPENLSK 508
Query: 343 GVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQSVPNNPIILDLA 164
VS ISLSG +K EKFLL+KLDVYESAVGD + +A P+I+ FPP FQ++P NPIILDLA
Sbjct: 509 KVSAISLSGGDKKVEKFLLEKLDVYESAVGDPHVKAPPRIEVFPPAFQTIPRNPIILDLA 568
Query: 163 FDTIEFPSLENRMKKEKKGFMSRFF 89
++ I+FPSLENRMKK+KKGF+SR +
Sbjct: 569 YNYIDFPSLENRMKKDKKGFISRLW 593
Score = 266 bits (679), Expect(2) = 0.0
Identities = 124/150 (82%), Positives = 140/150 (93%)
Frame = -2
Query: 1767 RGKYTKKAITESTITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV 1588
RGKYT++AITEST+TEVR+LH+VLY AERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV
Sbjct: 66 RGKYTRRAITESTVTEVRFLHLVLYSAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV 125
Query: 1587 KWATLFADLCGTKGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGK 1408
+WA LF+ LC KGDSRTSLEAEAYA+YM G+LLFE D+NW+TAL+NF +AR VYEELGK
Sbjct: 126 QWANLFSQLCAAKGDSRTSLEAEAYAAYMNGNLLFEQDRNWDTALKNFISARAVYEELGK 185
Query: 1407 YGDLENQVLCRERVEELEPSVRYCLHKVGE 1318
YGDLENQVLCRERVEELEPS+RYC HK+G+
Sbjct: 186 YGDLENQVLCRERVEELEPSIRYCRHKIGQ 215
>ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|222869298|gb|EEF06429.1|
predicted protein [Populus trichocarpa]
Length = 601
Score = 557 bits (1435), Expect(2) = 0.0
Identities = 275/385 (71%), Positives = 328/385 (85%)
Frame = -1
Query: 1243 CLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASVTEFRWLGHRFPI 1064
C HK+GE N+KT ELL IG+MEGPALDLFKAKLEA M EARSQQAAS+TEF WLGHRFPI
Sbjct: 216 CRHKIGESNLKTSELLQIGEMEGPALDLFKAKLEAAMAEARSQQAASLTEFHWLGHRFPI 275
Query: 1063 SNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARSCIRTDLVTAGNA 884
SNAKTRV ILKAQELEK++HG ADS+PAEKKL +FDKIF AYH+ARS IR+DLV+AGNA
Sbjct: 276 SNAKTRVAILKAQELEKDLHGPTADSIPAEKKLAVFDKIFTAYHEARSFIRSDLVSAGNA 335
Query: 883 ENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKGTKPEGLVRLYDL 704
++VKD+LNGLDKAVSAVLGQRTIERNQLLVSIAKSK++R+ DD+ K TKPE LVRLYDL
Sbjct: 336 DSVKDELNGLDKAVSAVLGQRTIERNQLLVSIAKSKLTRRRDDKNEKVTKPEELVRLYDL 395
Query: 703 LIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSYSLAGKRTEAYAL 524
L+QNT DL+DLVSSGRDRK EEV F E+ LR F+A+RCFYLAKSYS AGKR EAY L
Sbjct: 396 LLQNTADLSDLVSSGRDRKPEEVEFTEDCDLRSTAFRAQRCFYLAKSYSSAGKRAEAYVL 455
Query: 523 YCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGIMEEVKAPEKLSE 344
YC AR++ ++AL+K ++++ D+V I+EL+ LNN+CR+N CIEHA GIME K E LS+
Sbjct: 456 YCHARSLAENALKKFQTVTSTDEVTIKELRTLNNECRANSCIEHATGIMEHEKVSENLSK 515
Query: 343 GVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQSVPNNPIILDLA 164
VS ISLSG +K EKFLL+KLDVYESAVG+ N ++ P+I+ FPP FQS+P NPI+LDLA
Sbjct: 516 KVSTISLSGVDKKVEKFLLEKLDVYESAVGEPNVKSVPRIEVFPPAFQSIPRNPIVLDLA 575
Query: 163 FDTIEFPSLENRMKKEKKGFMSRFF 89
++ I+FPSLENRMKK+KKGF+SR +
Sbjct: 576 YNCIDFPSLENRMKKDKKGFISRLW 600
Score = 261 bits (667), Expect(2) = 0.0
Identities = 124/150 (82%), Positives = 137/150 (91%)
Frame = -2
Query: 1767 RGKYTKKAITESTITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV 1588
RGKYT++AI EST+TEVRYLH+VLY AERAWSHAMEKRQL DGPNA+QRIYLIGRLRKAV
Sbjct: 73 RGKYTRRAINESTVTEVRYLHMVLYTAERAWSHAMEKRQLLDGPNAKQRIYLIGRLRKAV 132
Query: 1587 KWATLFADLCGTKGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGK 1408
KWA LF+ LC KGDSRTSLEAEAYASYM G LLFE D+NW+TAL+NF ++R VYEELGK
Sbjct: 133 KWADLFSGLCAAKGDSRTSLEAEAYASYMNGLLLFEQDRNWDTALKNFISSRAVYEELGK 192
Query: 1407 YGDLENQVLCRERVEELEPSVRYCLHKVGE 1318
YGDLENQVLCRERVEELEPS+RYC HK+GE
Sbjct: 193 YGDLENQVLCRERVEELEPSIRYCRHKIGE 222
>ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|222859441|gb|EEE96988.1|
predicted protein [Populus trichocarpa]
Length = 602
Score = 559 bits (1440), Expect(2) = 0.0
Identities = 276/385 (71%), Positives = 330/385 (85%)
Frame = -1
Query: 1243 CLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASVTEFRWLGHRFPI 1064
C HK+GE N+KT ELL IG+MEGPALDLFKAKLEA M EARSQQAAS+TEFRWLGHRFPI
Sbjct: 217 CRHKIGESNLKTSELLQIGEMEGPALDLFKAKLEAAMAEARSQQAASLTEFRWLGHRFPI 276
Query: 1063 SNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARSCIRTDLVTAGNA 884
SNAKTRV+ILKAQELEK++HG AADSLP EKKL +FDKI+ AY +ARS IR+DL +AGNA
Sbjct: 277 SNAKTRVSILKAQELEKDLHGPAADSLPVEKKLAVFDKIYTAYQEARSFIRSDLASAGNA 336
Query: 883 ENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKGTKPEGLVRLYDL 704
++VKDDLNGLDKAV AVLGQRTIERNQLLVSIAKSK++R DD+ K TKPE LVRLYDL
Sbjct: 337 DSVKDDLNGLDKAVGAVLGQRTIERNQLLVSIAKSKLARHRDDKNEKVTKPEELVRLYDL 396
Query: 703 LIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSYSLAGKRTEAYAL 524
L+QNT DL+DLVSSGRDRK EEVAF+E+ LR + F+A+RCFYLAKSYS AGKRTEAYAL
Sbjct: 397 LLQNTGDLSDLVSSGRDRKPEEVAFSEDCVLRSMAFRAQRCFYLAKSYSSAGKRTEAYAL 456
Query: 523 YCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGIMEEVKAPEKLSE 344
YC AR++ ++AL+K +++ D+ M +ELK L N+CR+N CIEHA GIME+ KAPE LS+
Sbjct: 457 YCHARSLAENALKKFQTMMDTDEAMTKELKTLYNECRANSCIEHATGIMEDEKAPENLSK 516
Query: 343 GVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQSVPNNPIILDLA 164
+S ISLSG +K EKFL++KLDVYESAVG+ N ++ P+I FPP FQS+P NPI+LDLA
Sbjct: 517 KISTISLSGVDKKAEKFLVEKLDVYESAVGEPNVKSVPRIGVFPPAFQSIPRNPIVLDLA 576
Query: 163 FDTIEFPSLENRMKKEKKGFMSRFF 89
++ I+FPSLENRMKK+KKGF+SR +
Sbjct: 577 YNCIDFPSLENRMKKDKKGFISRLW 601
Score = 258 bits (658), Expect(2) = 0.0
Identities = 124/150 (82%), Positives = 136/150 (90%)
Frame = -2
Query: 1767 RGKYTKKAITESTITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV 1588
RGKYT++A+ EST+TEVRYLH+VLY AERAWSHAMEKRQL DGPNA+QRIYLIGRLRKAV
Sbjct: 74 RGKYTRRAMNESTVTEVRYLHLVLYTAERAWSHAMEKRQLLDGPNAKQRIYLIGRLRKAV 133
Query: 1587 KWATLFADLCGTKGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGK 1408
KWA LF+ LC KGDSRTSLEAEAYAS M G LLFE D+NW+TAL+NF +AR VYEELGK
Sbjct: 134 KWADLFSRLCAAKGDSRTSLEAEAYASCMNGLLLFEQDRNWDTALKNFISARAVYEELGK 193
Query: 1407 YGDLENQVLCRERVEELEPSVRYCLHKVGE 1318
YGDLENQVLCRERVEELEPSVRYC HK+GE
Sbjct: 194 YGDLENQVLCRERVEELEPSVRYCRHKIGE 223
>ref|XP_004154654.1| PREDICTED: signal recognition particle 68 kDa protein-like [Cucumis
sativus]
Length = 594
Score = 541 bits (1395), Expect(2) = 0.0
Identities = 268/385 (69%), Positives = 328/385 (85%)
Frame = -1
Query: 1243 CLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASVTEFRWLGHRFPI 1064
CLHK+G+ N++ ELL IG+MEGPALDLFKAKLEAVM EARSQQA S+TEF WLGHRFPI
Sbjct: 210 CLHKIGKSNLQASELLHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPI 269
Query: 1063 SNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARSCIRTDLVTAGNA 884
SNAKTRV+ILKA+ELEK++ S+ADSLPAEK+L IFDKIFAAYH+ARS IR+DLV+AGNA
Sbjct: 270 SNAKTRVSILKARELEKDLQ-SSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNA 328
Query: 883 ENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKGTKPEGLVRLYDL 704
E+VKDDL+GLDKAVSAVLGQRTIERNQLLV IAKSK+ R+ D++ K TKPE LVRLYDL
Sbjct: 329 ESVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDL 388
Query: 703 LIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSYSLAGKRTEAYAL 524
L+QN DL+DLVSSGRDR+ EEV FAEE +L+ L F+ ERCFYLAKSYSLAGKR EAY L
Sbjct: 389 LLQNIADLSDLVSSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAGKRAEAYVL 448
Query: 523 YCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGIMEEVKAPEKLSE 344
YC AR++++DA+QK ++ + D +I+ELK L +CR N C+EHA GI+EE KAPE LS+
Sbjct: 449 YCHARSLIEDAIQKFRTANISDPKLIEELKTLIEECRVNSCVEHATGIIEEAKAPENLSK 508
Query: 343 GVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQSVPNNPIILDLA 164
+SN+SL+GA +K K+LL LD YESAVGD+N + P+I+AFPP FQ++P NPI+LD+A
Sbjct: 509 KISNMSLTGAEKKSAKYLLQSLDNYESAVGDSNIKTAPRIEAFPPAFQAIPRNPIVLDIA 568
Query: 163 FDTIEFPSLENRMKKEKKGFMSRFF 89
F+ I+FPSLENRMKK++KGF+SR +
Sbjct: 569 FNFIDFPSLENRMKKDRKGFISRLW 593
Score = 269 bits (688), Expect(2) = 0.0
Identities = 128/150 (85%), Positives = 140/150 (93%)
Frame = -2
Query: 1767 RGKYTKKAITESTITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV 1588
RGKYTK+AIT+ST++EVRYLHVVLY AERAWSHAMEKRQLPDGPN RQRIYLIGRLRKAV
Sbjct: 67 RGKYTKRAITQSTVSEVRYLHVVLYTAERAWSHAMEKRQLPDGPNPRQRIYLIGRLRKAV 126
Query: 1587 KWATLFADLCGTKGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGK 1408
KWATLFA LC +KGDSRTSLEAEAYASYM G+LLFE D+NW+TAL NF+ AR VYEELGK
Sbjct: 127 KWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDTALLNFKRARAVYEELGK 186
Query: 1407 YGDLENQVLCRERVEELEPSVRYCLHKVGE 1318
GDLENQVLCRERVEELEPS+RYCLHK+G+
Sbjct: 187 VGDLENQVLCRERVEELEPSIRYCLHKIGK 216
>ref|XP_004139127.1| PREDICTED: signal recognition particle 68 kDa protein-like [Cucumis
sativus]
Length = 574
Score = 538 bits (1385), Expect(2) = 0.0
Identities = 268/385 (69%), Positives = 328/385 (85%)
Frame = -1
Query: 1243 CLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASVTEFRWLGHRFPI 1064
CLHK+G+ N++ ELL IG+MEGPALDLFKAKLEAVM EARSQQA S+TEF WLGHRFPI
Sbjct: 191 CLHKIGKSNLQASELLHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMTEFHWLGHRFPI 250
Query: 1063 SNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARSCIRTDLVTAGNA 884
SNAKTRV+ILKA+ELEK++ S+ADSLPAEK+L IFDKIFAAYH+ARS IR+DLV+AGNA
Sbjct: 251 SNAKTRVSILKARELEKDLQ-SSADSLPAEKRLSIFDKIFAAYHEARSSIRSDLVSAGNA 309
Query: 883 ENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKGTKPEGLVRLYDL 704
E+VKDDL+GLDKAVSAVLGQRTIERNQLLV IAKSK+ R+ D++ K TKPE LVRLYDL
Sbjct: 310 ESVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDL 369
Query: 703 LIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSYSLAGKRTEAYAL 524
L+QN DL+DLVSSGRDR+ EEV FAEE +L+ L F+ ERCFYLAKSYSLAGKR EAY L
Sbjct: 370 LLQNIADLSDLVSSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYSLAGKRAEAYVL 429
Query: 523 YCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGIMEEVKAPEKLSE 344
YC AR++++DA+QK ++ + D +I+ELK L +CR N C+EHA GI+EE KAPE LS+
Sbjct: 430 YCHARSLIEDAIQKFRTANISDP-LIEELKTLIEECRVNSCVEHATGIIEEAKAPENLSK 488
Query: 343 GVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQSVPNNPIILDLA 164
+SN+SL+GA +K K+LL LD YESAVGD+N + P+I+AFPP FQ++P NPI+LD+A
Sbjct: 489 KISNMSLTGAEKKSAKYLLQSLDNYESAVGDSNIKTAPRIEAFPPAFQAIPRNPIVLDIA 548
Query: 163 FDTIEFPSLENRMKKEKKGFMSRFF 89
F+ I+FPSLENRMKK++KGF+SR +
Sbjct: 549 FNFIDFPSLENRMKKDRKGFISRLW 573
Score = 269 bits (688), Expect(2) = 0.0
Identities = 128/150 (85%), Positives = 140/150 (93%)
Frame = -2
Query: 1767 RGKYTKKAITESTITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV 1588
RGKYTK+AIT+ST++EVRYLHVVLY AERAWSHAMEKRQLPDGPN RQRIYLIGRLRKAV
Sbjct: 48 RGKYTKRAITQSTVSEVRYLHVVLYTAERAWSHAMEKRQLPDGPNPRQRIYLIGRLRKAV 107
Query: 1587 KWATLFADLCGTKGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGK 1408
KWATLFA LC +KGDSRTSLEAEAYASYM G+LLFE D+NW+TAL NF+ AR VYEELGK
Sbjct: 108 KWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDTALLNFKRARAVYEELGK 167
Query: 1407 YGDLENQVLCRERVEELEPSVRYCLHKVGE 1318
GDLENQVLCRERVEELEPS+RYCLHK+G+
Sbjct: 168 VGDLENQVLCRERVEELEPSIRYCLHKIGK 197