BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008193
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloro...    99   3e-19
emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]    99   3e-19
ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabid...    99   5e-19
ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana...    98   8e-19
ref|XP_002531346.1| structural constituent of ribosome, putative...    94   9e-18

>ref|XP_002274396.2| PREDICTED: 30S ribosomal protein S31, chloroplastic-like [Vitis
           vinifera] gi|297740225|emb|CBI30407.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/64 (70%), Positives = 49/64 (76%)
 Frame = -3

Query: 210 IYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPPRVAVPPSPLKKDPFEXXXXXXXXXX 31
           +YCGRGD+KTAKGKRFNHSFGNARPRNK KGRGPPR  +PPSP KKD FE          
Sbjct: 54  VYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEID 113

Query: 30  DSLF 19
           +SLF
Sbjct: 114 ESLF 117


>emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis vinifera]
          Length = 117

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/64 (70%), Positives = 49/64 (76%)
 Frame = -3

Query: 210 IYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPPRVAVPPSPLKKDPFEXXXXXXXXXX 31
           +YCGRGD+KTAKGKRFNHSFGNARPRNK KGRGPPR  +PPSP KKD FE          
Sbjct: 53  VYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEID 112

Query: 30  DSLF 19
           +SLF
Sbjct: 113 ESLF 116


>ref|XP_002879729.1| plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp.
           lyrata] gi|297325568|gb|EFH55988.1| plastid-specific
           ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = -3

Query: 210 IYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPPRVAVPPSPLKKDPFE 61
           +YCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGP RV VPP+P +KD FE
Sbjct: 53  VYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFE 102


>ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
           gi|75275034|sp|O80439.1|RR31_ARATH RecName: Full=30S
           ribosomal protein S31, chloroplastic; AltName:
           Full=Plastid-specific 30S ribosomal protein 4;
           Short=PSRP-4; Flags: Precursor
           gi|7578852|gb|AAF64153.1|AF236826_1 plastid-specific
           ribosomal protein 4 precursor [Arabidopsis thaliana]
           gi|3335362|gb|AAC27163.1| 30S ribosomal protein S31
           [Arabidopsis thaliana] gi|15529182|gb|AAK97685.1|
           At2g38140/F16M14.7 [Arabidopsis thaliana]
           gi|16974357|gb|AAL31104.1| At2g38140/F16M14.7
           [Arabidopsis thaliana] gi|21618289|gb|AAM67339.1| 30S
           ribosomal protein S31 [Arabidopsis thaliana]
           gi|330254400|gb|AEC09494.1| 30S ribosomal protein S31
           [Arabidopsis thaliana]
          Length = 118

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/64 (70%), Positives = 50/64 (78%)
 Frame = -3

Query: 210 IYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPPRVAVPPSPLKKDPFEXXXXXXXXXX 31
           +YCGRGDRKTAKGKRFNHSFGNARPRNK+KGRGP RV VPP+P +KD FE          
Sbjct: 53  VYCGRGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDID 112

Query: 30  DSLF 19
           +SLF
Sbjct: 113 ESLF 116


>ref|XP_002531346.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223529044|gb|EEF31030.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 116

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/50 (82%), Positives = 44/50 (88%)
 Frame = -3

Query: 210 IYCGRGDRKTAKGKRFNHSFGNARPRNKNKGRGPPRVAVPPSPLKKDPFE 61
           +YCGRGD+KTAKGKRFNHSFGNARPRNKNKGRGPPR+ VP SP   D FE
Sbjct: 53  VYCGRGDKKTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFE 102