BLASTX nr result

ID: Coptis24_contig00008174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008174
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-50
ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   156   1e-48
ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-48
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...   152   6e-47
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]   144   2e-44

>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  164 bits (416), Expect(2) = 1e-50
 Identities = 78/150 (52%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
 Frame = -2

Query: 1258 KLNYDQCIQHFSHKHPLVLSNVQETTLKWYECSGCKVKPSEWFYTCKLCDYFLHIPCSQV 1079
            KLN+D  I HFSH HPL LSN Q  +L    CS C ++PS W Y+CK C++ LHI C+Q+
Sbjct: 3    KLNHDPYINHFSHPHPLELSNAQ--SLYMNSCSACNLQPSGWMYSCKPCNFTLHISCTQM 60

Query: 1078 PQRIQHPAHPNHDLTLSLVPLY---QTLCNACGEQVKGTGFFYQCCDCRLMLHVLCASVP 908
            P  I HP HP H LTL   P+Y      C+ CG Q  G GF Y C  C   +H++CA+ P
Sbjct: 61   PTLITHPCHPIHPLTLFSTPVYPGGSFNCDGCGLQ--GNGFNYHCTTCDFDVHMMCATNP 118

Query: 907  TSVKHQTHSHPLKLTFNPPYQTVGFSCDIC 818
             S+ HQ+H H L L F PPYQT GFSCDIC
Sbjct: 119  LSLAHQSHPHQLNLAFYPPYQTKGFSCDIC 148



 Score = 63.2 bits (152), Expect(2) = 1e-50
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = -3

Query: 765 FSCDICRKLGSNHWLYRCNSCGFDAHLHCA 676
           FSCDIC K+GSNHWLYRC++C FDAH+ CA
Sbjct: 143 FSCDICHKIGSNHWLYRCSACEFDAHMKCA 172


>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
            gi|223529907|gb|EEF31836.1| protein binding protein,
            putative [Ricinus communis]
          Length = 324

 Score =  156 bits (395), Expect(2) = 1e-48
 Identities = 73/150 (48%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
 Frame = -2

Query: 1258 KLNYDQCIQHFSHKHPLVLSNVQETTLKWYECSGCKVKPSEWFYTCKLCDYFLHIPCSQV 1079
            +L++D CI HFSH HPL LSN+Q ++     CS C+++ S W Y+C  C++ LH+ CSQ+
Sbjct: 3    RLSHDPCIHHFSHPHPLHLSNLQ-SSYPITHCSACQLESSGWMYSCNPCNFTLHLSCSQL 61

Query: 1078 PQRIQHPAHPNHDLTLSLVPLYQT---LCNACGEQVKGTGFFYQCCDCRLMLHVLCASVP 908
            P  I HP+HPNH L L   P+Y      C+ACG    G GF Y C  C   +H  CA  P
Sbjct: 62   PSLITHPSHPNHTLDLLPSPIYPNGVFSCDACGHG--GLGFGYHCNHCSFDIHTTCAQNP 119

Query: 907  TSVKHQTHSHPLKLTFNPPYQTVGFSCDIC 818
             S+ +Q H H L+LTF+PPY T GFSCDIC
Sbjct: 120  LSLTNQFHPHLLQLTFDPPYHTKGFSCDIC 149



 Score = 64.3 bits (155), Expect(2) = 1e-48
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = -3

Query: 765 FSCDICRKLGSNHWLYRCNSCGFDAHLHCAAPKPRISEVSHQVMSSQPQ 619
           FSCDIC+K+GSNHWLYRC  C FDAHL CA     +   + Q+   QPQ
Sbjct: 144 FSCDICQKIGSNHWLYRCAPCEFDAHLECA--MGAVPVAAQQLSQYQPQ 190


>ref|XP_002330854.1| predicted protein [Populus trichocarpa] gi|222872676|gb|EEF09807.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  157 bits (397), Expect(2) = 2e-48
 Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 4/147 (2%)
 Frame = -2

Query: 1246 DQCIQHFSHKHPLVLSNVQ-ETTLKWYECSGCKVKPSEWFYTCKLCDYFLHIPCSQVPQR 1070
            +  IQHFSH HPL LSN Q + TL    CSGCK+K S W Y C  C+YFLH+ CSQ+PQ+
Sbjct: 9    EAAIQHFSHPHPLQLSNYQPQQTLCLASCSGCKLKISGWIYACTQCNYFLHVSCSQMPQQ 68

Query: 1069 IQHPAHPNHDLTLSLVPLYQ---TLCNACGEQVKGTGFFYQCCDCRLMLHVLCASVPTSV 899
            I HP H NH L+L   P+Y      C+ACG+Q  G GF Y C  C + +H  CA++P  +
Sbjct: 69   ITHPYHQNHVLSLLSTPMYPGDLFNCDACGKQ--GNGFSYHCGTCNIYIHTTCAAMPLVL 126

Query: 898  KHQTHSHPLKLTFNPPYQTVGFSCDIC 818
             HQ+H H L LT   PY  + FSCD+C
Sbjct: 127  THQSHHHQLNLTPFAPYPNMSFSCDMC 153



 Score = 63.2 bits (152), Expect(2) = 2e-48
 Identities = 25/46 (54%), Positives = 29/46 (63%)
 Frame = -3

Query: 765 FSCDICRKLGSNHWLYRCNSCGFDAHLHCAAPKPRISEVSHQVMSS 628
           FSCD+C   GS  WLYRCN CGFDAHL CA  +P  ++   Q   S
Sbjct: 148 FSCDMCHNFGSKQWLYRCNLCGFDAHLDCAVSQPNPAQAQAQYYQS 193


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score =  152 bits (385), Expect(2) = 6e-47
 Identities = 76/144 (52%), Positives = 90/144 (62%), Gaps = 4/144 (2%)
 Frame = -2

Query: 1237 IQHFSHKHPLVLSNVQ-ETTLKWYECSGCKVKPSEWFYTCKLCDYFLHIPCSQVPQRIQH 1061
            I HFSH HPL LSN   + TL    CSGCK+K S   Y CK C+YFLHI CSQ+PQ+I H
Sbjct: 12   IHHFSHSHPLQLSNHHPQQTLTLASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITH 71

Query: 1060 PAHPNHDLTLSLVPLYQT---LCNACGEQVKGTGFFYQCCDCRLMLHVLCASVPTSVKHQ 890
              H  H L+L   P Y      C+ACG+Q  G GF Y C  C + LH+LCAS P  + HQ
Sbjct: 72   SFHKAHALSLLPNPAYPEGLFNCDACGKQ--GNGFSYHCGVCNIDLHILCASKPLFLNHQ 129

Query: 889  THSHPLKLTFNPPYQTVGFSCDIC 818
            +H H L L+F+PPY    FSCDIC
Sbjct: 130  SHHHRLALSFSPPYHNKSFSCDIC 153



 Score = 62.8 bits (151), Expect(2) = 6e-47
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = -3

Query: 765 FSCDICRKLGSNHWLYRCNSCGFDAHLHCAAPKP 664
           FSCDICR++G++HWLYRC+ C FDAHL CA   P
Sbjct: 148 FSCDICRQIGTSHWLYRCDECEFDAHLSCATATP 181


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score =  144 bits (363), Expect(2) = 2e-44
 Identities = 72/139 (51%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
 Frame = -2

Query: 1222 HKHPLVLSNVQ-ETTLKWYECSGCKVKPSEWFYTCKLCDYFLHIPCSQVPQRIQHPAHPN 1046
            H HPL LSN   + TL    CSGCK+K S   Y CK C+YFLHI CSQ+PQ+I H  H  
Sbjct: 23   HSHPLQLSNHHPQQTLTLASCSGCKLKASGLIYDCKRCNYFLHISCSQMPQQITHSFHKA 82

Query: 1045 HDLTLSLVPLYQT---LCNACGEQVKGTGFFYQCCDCRLMLHVLCASVPTSVKHQTHSHP 875
            H L+L   P Y      C+ACG+Q  G GF Y C  C + LH+LCAS P  + HQ+H H 
Sbjct: 83   HALSLLPNPAYPEGLFNCDACGKQ--GNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHR 140

Query: 874  LKLTFNPPYQTVGFSCDIC 818
            L L+F+PPY    FSCDIC
Sbjct: 141  LALSFSPPYHNKSFSCDIC 159



 Score = 62.8 bits (151), Expect(2) = 2e-44
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = -3

Query: 765 FSCDICRKLGSNHWLYRCNSCGFDAHLHCAAPKP 664
           FSCDICR++G++HWLYRC+ C FDAHL CA   P
Sbjct: 154 FSCDICRQIGTSHWLYRCDECEFDAHLSCATATP 187


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