BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008173
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...    67   1e-09
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]    59   3e-07
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
 Frame = -2

Query: 347 MAFSTHISPSYLLKNSTLFNLFTRTPYFLS-NHNTNRVFLHFLQYPSFFSPNTIFNLPMN 171
           M   +  +PS L + S LF+ FT+ P+F S  +N + +   FL Y  +  P  + N+  +
Sbjct: 1   MLRGSSFAPS-LNRASPLFSFFTKIPFFSSFQNNFHTIRRPFLHYHYYVFPKPVCNIQAS 59

Query: 170 Q----------NHSLSTSVQCATMPMPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHG 21
           +          + +LS   Q         + +S KA+ KA ++SPEGVL  K+D CSKHG
Sbjct: 60  RFCMERRVQFCSSALSAKPQIHESSALAAKKVSNKAKKKARQESPEGVLRSKIDNCSKHG 119

Query: 20  DLVEAL 3
           +LVEAL
Sbjct: 120 NLVEAL 125


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/104 (40%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
 Frame = -2

Query: 284 FTRTPYFLS-NHNTNRVFLHFLQY----PSFFSPNTIFNLPMNQ-----NHSLSTSVQCA 135
           F +TP      H   R  LH   +    P+ +SP     + MN+     N +LS + +  
Sbjct: 329 FAKTPILCHVGHTRLRPLLHGCSHHHFKPTTYSPYIKDRIFMNKSAHFSNLALSATNKYI 388

Query: 134 TMPMPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEAL 3
                  +TMS KA+ KA R+SPEGVL  KLDMCSK GD+VEAL
Sbjct: 389 PESSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEAL 432


>emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
          Length = 696

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = -2

Query: 215 PSFFSPNTIFNLPMNQN-HSLSTSVQCATMPMP----IGRTMSKKAQNKAYRQSPEGVLH 51
           P+ +SP     +  N++ H L+ ++      +P      +TMS K + KA R+SPEGVL 
Sbjct: 357 PTTYSPYIKDRIFTNKSAHFLNVALSATNKYIPESSAAAKTMSNKTRKKARRESPEGVLR 416

Query: 50  LKLDMCSKHGDLVEAL 3
            K DMCSKHGD+VEAL
Sbjct: 417 FKTDMCSKHGDVVEAL 432


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = -2

Query: 167 NHSLSTSVQCATMPMPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEAL 3
           N +LS + +       +  TMS KA+ KA R+SPEGVL  KLDMCSK GD+VEAL
Sbjct: 9   NLALSATNKYIPESSAVAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEAL 63


>ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
 Frame = -2

Query: 293 FNLFTRTPYF---LSNHNTNRVFLHFLQYPSFFSPNTIFNLPMNQNHSLSTSVQCATMPM 123
           F++FT++ Y+   LS+HN      H L   + FS  ++   P +++   +T+++      
Sbjct: 9   FSIFTQSHYWRPLLSSHNAK----HALTAATNFSITSLARTPKSRDEGTTTTIK------ 58

Query: 122 PIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEAL 3
                +S K++ KA+ +SPEGVL  KL+ CSK GD+++AL
Sbjct: 59  -----LSSKSRRKAFYESPEGVLLRKLNECSKDGDVIQAL 93