BLASTX nr result
ID: Coptis24_contig00008169
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008169 (1327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-... 530 e-148 ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-... 527 e-147 ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|... 527 e-147 ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-... 476 e-132 ref|XP_004134327.1| PREDICTED: F-box/kelch-repeat protein SKIP4-... 447 e-123 >ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera] gi|297745280|emb|CBI40360.3| unnamed protein product [Vitis vinifera] Length = 359 Score = 530 bits (1365), Expect = e-148 Identities = 242/353 (68%), Positives = 288/353 (81%) Frame = +2 Query: 140 LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSYRRK 319 LE + ++E +PLI GLPDDIAL CLARVPR+YHTLLKCVSRRW++LV SEEW++YR+K Sbjct: 8 LEGISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEEWHAYRQK 67 Query: 320 HNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNKIYL 499 H L+E WIYALCRD+ ++CCYVLDP S++R W+ I P + KRKGMSFE LG K+YL Sbjct: 68 HKLDEPWIYALCRDKFERVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKVYL 127 Query: 500 LGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSSDPL 679 LGGCGW +DATDEVY YD S N W + A +STARCYFACE LN KIYAIGG+GS S+DP Sbjct: 128 LGGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSNDPH 187 Query: 680 SWDTYDPRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPSNGTW 859 SWDTY+P TNSW S+ D N+VPDIE+S+V+D KIYIRCG S + HVY+VVY PS+GTW Sbjct: 188 SWDTYNPHTNSWKSHLDPNIVPDIEDSIVLDEKIYIRCGTSG-LTSHVYAVVYNPSHGTW 246 Query: 860 QHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRL 1039 QHAD DMV GW+GP++VV+ LYVLD+ GTRLMMWQKES+ WVA+GRLSPLLT PPCRL Sbjct: 247 QHADADMVLGWQGPAVVVDGTLYVLDQRLGTRLMMWQKESRKWVAVGRLSPLLTCPPCRL 306 Query: 1040 AVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198 +G I VIGKGLSTVV D+G NMGGV+VSSSIPKL SDDDVISCK +++ Sbjct: 307 VAIGKSIFVIGKGLSTVVFDIGNVGNMGGVMVSSSIPKLTSDDDVISCKILAI 359 >ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera] Length = 359 Score = 527 bits (1358), Expect = e-147 Identities = 241/353 (68%), Positives = 288/353 (81%) Frame = +2 Query: 140 LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSYRRK 319 LE + ++E +PLI GLPDDIAL CLARVPR+YHTLLKCVSRRW++LV SEEW++YR+K Sbjct: 8 LEGISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEEWHAYRQK 67 Query: 320 HNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNKIYL 499 H L+E WIYALCRD+ ++CCYVLDP S++R W+ I P + KRKGMSFE LG K+YL Sbjct: 68 HKLDEPWIYALCRDKFKRVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKVYL 127 Query: 500 LGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSSDPL 679 LGGCGW +DATDEVY YD S N W + A +STARCYFACE LN KIYAIGG+GS S+DP Sbjct: 128 LGGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSNDPH 187 Query: 680 SWDTYDPRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPSNGTW 859 SWDTY+P TNSW S+SD N+VPDIE+++V+D KIYIRCG +S + HVY VVY PS+GTW Sbjct: 188 SWDTYNPHTNSWKSHSDPNIVPDIEDTIVLDEKIYIRCG-TSALTSHVYVVVYNPSHGTW 246 Query: 860 QHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRL 1039 QHAD DMV GW+GP++VV+ +VLD+ GTRLMMWQKES WVA+GRLSPLLT PPCRL Sbjct: 247 QHADADMVLGWQGPAVVVDGXFFVLDQRLGTRLMMWQKESTKWVAVGRLSPLLTCPPCRL 306 Query: 1040 AVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198 +G I VIGKGLSTVV D+G A NMGGV+VSSSIPKL SDDDVISCK +++ Sbjct: 307 VAIGKSIFVIGKGLSTVVFDIGNAGNMGGVMVSSSIPKLTSDDDVISCKILAI 359 >ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|223549030|gb|EEF50519.1| Protein AFR, putative [Ricinus communis] Length = 353 Score = 527 bits (1357), Expect = e-147 Identities = 234/347 (67%), Positives = 287/347 (82%) Frame = +2 Query: 158 LEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSYRRKHNLEET 337 +E LI GLPDDI LFCLARVPR+YHT+LKCV RRW++LVCSEEW +YR KHNL ET Sbjct: 8 IEEGQAQLIRGLPDDIVLFCLARVPRKYHTVLKCVCRRWRDLVCSEEWRAYRMKHNLSET 67 Query: 338 WIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNKIYLLGGCGW 517 WIYALCRD+ +QICCYVLDP+SS+RCW+ I+ +PS C KRKGM FEALG K+Y LGGCGW Sbjct: 68 WIYALCRDKFDQICCYVLDPDSSRRCWKLIQGLPSHCLKRKGMGFEALGKKLYFLGGCGW 127 Query: 518 FQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSSDPLSWDTYD 697 +DATDE YCYD S+NSW + ++STARCYFACE ++ KIYAIGG+GS SDP SWDT+D Sbjct: 128 LEDATDEAYCYDVSRNSWTEATSLSTARCYFACEVMDGKIYAIGGLGSKLSDPHSWDTFD 187 Query: 698 PRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPSNGTWQHADND 877 N W S+SD N+VPD+E+S+V+D KIYIRCGASS + HVY+V+YEP NGTWQHAD D Sbjct: 188 AHKNCWESHSDANIVPDVEDSIVLDGKIYIRCGASS-VSSHVYAVLYEPLNGTWQHADVD 246 Query: 878 MVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRLAVVGNC 1057 M SGWRGP++VV LYVLD++SGTRLM+W+K+ ++W+A+GRLS LLTRPPCR+ +G Sbjct: 247 MASGWRGPAVVVXXCLYVLDQSSGTRLMIWRKDKREWMAVGRLSSLLTRPPCRIVAIGKR 306 Query: 1058 IIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198 I +IGKGLSTVV D+G+ NM GV+VSSSIP L +DDVISCK+++L Sbjct: 307 IFIIGKGLSTVVFDIGKTGNMEGVMVSSSIPGLNYEDDVISCKSLAL 353 >ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max] Length = 362 Score = 476 bits (1225), Expect = e-132 Identities = 217/364 (59%), Positives = 280/364 (76%) Frame = +2 Query: 107 HASKLKTKSN*LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELV 286 H K SN ++ ++E ++ LI GLPDD++L CLARVPR+YH++LKCVS+RW++L+ Sbjct: 3 HLDDGKESSN---SVNEIEATNSLLICGLPDDLSLMCLARVPRKYHSVLKCVSKRWRDLI 59 Query: 287 CSEEWYSYRRKHNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGM 466 CSEEWY YRRKH L+ETWIYALCRD+ N+I CYVLDP +S+R W+ + +P + RKGM Sbjct: 60 CSEEWYHYRRKHKLDETWIYALCRDKSNEIFCYVLDPTTSRRYWKLLDGLPPHISNRKGM 119 Query: 467 SFEALGNKIYLLGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAI 646 FEALGNK++LLGGC F D+TDE Y YD S N W + A++S ARCYFACE L+EK+YAI Sbjct: 120 GFEALGNKLFLLGGCSGFLDSTDEAYSYDASSNCWVEAASLSNARCYFACEVLDEKLYAI 179 Query: 647 GGVGSNSSDPLSWDTYDPRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVY 826 GG+ SNSSD SWDT+DP T WT + D N+ DIE+SVV+D KIY RC + + PH + Sbjct: 180 GGLVSNSSDN-SWDTFDPLTKCWTFHIDPNIASDIEDSVVLDGKIYTRCARHTDVAPHAF 238 Query: 827 SVVYEPSNGTWQHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRL 1006 +VVYEPS+GTWQ+AD DMVSGW GP++VV LYVLD++ GTRLMMW KE ++W+ +G+L Sbjct: 239 AVVYEPSSGTWQYADADMVSGWTGPAVVVYGTLYVLDQSLGTRLMMWHKERREWIPVGKL 298 Query: 1007 SPLLTRPPCRLAVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCK 1186 SPLLTRPPC+L VG I ++GK LSTVV+DVG+ N G V++ SSIP L SD +VISCK Sbjct: 299 SPLLTRPPCQLVAVGKSIFIVGKTLSTVVVDVGDLGNEGQVMMGSSIPGLLSDFNVISCK 358 Query: 1187 TMSL 1198 +S+ Sbjct: 359 CLSI 362 >ref|XP_004134327.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis sativus] gi|449480385|ref|XP_004155879.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis sativus] Length = 358 Score = 447 bits (1150), Expect = e-123 Identities = 210/357 (58%), Positives = 271/357 (75%), Gaps = 1/357 (0%) Frame = +2 Query: 131 SN*LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSY 310 SN LE + P LI LPDDIAL L+RVPR+YH LKCVS RWK LV S+EWY+ Sbjct: 7 SNGLEELTP--PPGRSLIHSLPDDIALSILSRVPRKYHHNLKCVSNRWKGLVNSQEWYAR 64 Query: 311 RRKHNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNK 490 R K+NL ETWIYALCRD+ Q+ CYVLD NSSKRCW+ +++ P+ KRKGM FEA+G K Sbjct: 65 REKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKNWPTCSFKRKGMGFEAMGRK 124 Query: 491 IYLLGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSS 670 +Y+LGGC W +DA+DEVYCYDTS NSW VA +S+ARCYFACE LNEK+Y IGG+ +S Sbjct: 125 LYVLGGCSWSEDASDEVYCYDTSINSWTPVAQLSSARCYFACEVLNEKLYTIGGICPSSG 184 Query: 671 DPLSWDTYDPRTNSWTSYSDL-NVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPS 847 D SWD YDP TN+W Y D+ N+ +IE+S+VMD KIYIR ++ + VY++VY+PS Sbjct: 185 DLHSWDVYDPSTNTWEPYLDITNIQNEIEDSIVMDGKIYIRLRSADS---QVYALVYDPS 241 Query: 848 NGTWQHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRP 1027 +G WQH++++MVSGWRGP+++V+ LYVLD++SGTRLMMW E K W+ +GR S LLTRP Sbjct: 242 SGMWQHSNSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKGWIPVGRFSSLLTRP 301 Query: 1028 PCRLAVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198 PC+L VG I+V+GKGLS+V+ DV + M G++VSSSIP+L SD DV++CK ++ Sbjct: 302 PCKLVGVGTKIVVVGKGLSSVIFDVSNVKTMMGLMVSSSIPRLDSDIDVLACKCTTI 358