BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008169
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-...   530   e-148
ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...   527   e-147
ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|...   527   e-147
ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   476   e-132
ref|XP_004134327.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   447   e-123

>ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera]
            gi|297745280|emb|CBI40360.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  530 bits (1365), Expect = e-148
 Identities = 242/353 (68%), Positives = 288/353 (81%)
 Frame = +2

Query: 140  LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSYRRK 319
            LE + ++E   +PLI GLPDDIAL CLARVPR+YHTLLKCVSRRW++LV SEEW++YR+K
Sbjct: 8    LEGISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEEWHAYRQK 67

Query: 320  HNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNKIYL 499
            H L+E WIYALCRD+  ++CCYVLDP S++R W+ I   P +  KRKGMSFE LG K+YL
Sbjct: 68   HKLDEPWIYALCRDKFERVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKVYL 127

Query: 500  LGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSSDPL 679
            LGGCGW +DATDEVY YD S N W + A +STARCYFACE LN KIYAIGG+GS S+DP 
Sbjct: 128  LGGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSNDPH 187

Query: 680  SWDTYDPRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPSNGTW 859
            SWDTY+P TNSW S+ D N+VPDIE+S+V+D KIYIRCG S  +  HVY+VVY PS+GTW
Sbjct: 188  SWDTYNPHTNSWKSHLDPNIVPDIEDSIVLDEKIYIRCGTSG-LTSHVYAVVYNPSHGTW 246

Query: 860  QHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRL 1039
            QHAD DMV GW+GP++VV+  LYVLD+  GTRLMMWQKES+ WVA+GRLSPLLT PPCRL
Sbjct: 247  QHADADMVLGWQGPAVVVDGTLYVLDQRLGTRLMMWQKESRKWVAVGRLSPLLTCPPCRL 306

Query: 1040 AVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198
              +G  I VIGKGLSTVV D+G   NMGGV+VSSSIPKL SDDDVISCK +++
Sbjct: 307  VAIGKSIFVIGKGLSTVVFDIGNVGNMGGVMVSSSIPKLTSDDDVISCKILAI 359


>ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP4-like
            [Vitis vinifera]
          Length = 359

 Score =  527 bits (1358), Expect = e-147
 Identities = 241/353 (68%), Positives = 288/353 (81%)
 Frame = +2

Query: 140  LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSYRRK 319
            LE + ++E   +PLI GLPDDIAL CLARVPR+YHTLLKCVSRRW++LV SEEW++YR+K
Sbjct: 8    LEGISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEEWHAYRQK 67

Query: 320  HNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNKIYL 499
            H L+E WIYALCRD+  ++CCYVLDP S++R W+ I   P +  KRKGMSFE LG K+YL
Sbjct: 68   HKLDEPWIYALCRDKFKRVCCYVLDPYSTRRSWKLIEGFPPRSLKRKGMSFEVLGKKVYL 127

Query: 500  LGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSSDPL 679
            LGGCGW +DATDEVY YD S N W + A +STARCYFACE LN KIYAIGG+GS S+DP 
Sbjct: 128  LGGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSNDPH 187

Query: 680  SWDTYDPRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPSNGTW 859
            SWDTY+P TNSW S+SD N+VPDIE+++V+D KIYIRCG +S +  HVY VVY PS+GTW
Sbjct: 188  SWDTYNPHTNSWKSHSDPNIVPDIEDTIVLDEKIYIRCG-TSALTSHVYVVVYNPSHGTW 246

Query: 860  QHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRL 1039
            QHAD DMV GW+GP++VV+   +VLD+  GTRLMMWQKES  WVA+GRLSPLLT PPCRL
Sbjct: 247  QHADADMVLGWQGPAVVVDGXFFVLDQRLGTRLMMWQKESTKWVAVGRLSPLLTCPPCRL 306

Query: 1040 AVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198
              +G  I VIGKGLSTVV D+G A NMGGV+VSSSIPKL SDDDVISCK +++
Sbjct: 307  VAIGKSIFVIGKGLSTVVFDIGNAGNMGGVMVSSSIPKLTSDDDVISCKILAI 359


>ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|223549030|gb|EEF50519.1|
            Protein AFR, putative [Ricinus communis]
          Length = 353

 Score =  527 bits (1357), Expect = e-147
 Identities = 234/347 (67%), Positives = 287/347 (82%)
 Frame = +2

Query: 158  LEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSYRRKHNLEET 337
            +E     LI GLPDDI LFCLARVPR+YHT+LKCV RRW++LVCSEEW +YR KHNL ET
Sbjct: 8    IEEGQAQLIRGLPDDIVLFCLARVPRKYHTVLKCVCRRWRDLVCSEEWRAYRMKHNLSET 67

Query: 338  WIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNKIYLLGGCGW 517
            WIYALCRD+ +QICCYVLDP+SS+RCW+ I+ +PS C KRKGM FEALG K+Y LGGCGW
Sbjct: 68   WIYALCRDKFDQICCYVLDPDSSRRCWKLIQGLPSHCLKRKGMGFEALGKKLYFLGGCGW 127

Query: 518  FQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSSDPLSWDTYD 697
             +DATDE YCYD S+NSW +  ++STARCYFACE ++ KIYAIGG+GS  SDP SWDT+D
Sbjct: 128  LEDATDEAYCYDVSRNSWTEATSLSTARCYFACEVMDGKIYAIGGLGSKLSDPHSWDTFD 187

Query: 698  PRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPSNGTWQHADND 877
               N W S+SD N+VPD+E+S+V+D KIYIRCGASS +  HVY+V+YEP NGTWQHAD D
Sbjct: 188  AHKNCWESHSDANIVPDVEDSIVLDGKIYIRCGASS-VSSHVYAVLYEPLNGTWQHADVD 246

Query: 878  MVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRPPCRLAVVGNC 1057
            M SGWRGP++VV   LYVLD++SGTRLM+W+K+ ++W+A+GRLS LLTRPPCR+  +G  
Sbjct: 247  MASGWRGPAVVVXXCLYVLDQSSGTRLMIWRKDKREWMAVGRLSSLLTRPPCRIVAIGKR 306

Query: 1058 IIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198
            I +IGKGLSTVV D+G+  NM GV+VSSSIP L  +DDVISCK+++L
Sbjct: 307  IFIIGKGLSTVVFDIGKTGNMEGVMVSSSIPGLNYEDDVISCKSLAL 353


>ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 362

 Score =  476 bits (1225), Expect = e-132
 Identities = 217/364 (59%), Positives = 280/364 (76%)
 Frame = +2

Query: 107  HASKLKTKSN*LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELV 286
            H    K  SN   ++ ++E  ++ LI GLPDD++L CLARVPR+YH++LKCVS+RW++L+
Sbjct: 3    HLDDGKESSN---SVNEIEATNSLLICGLPDDLSLMCLARVPRKYHSVLKCVSKRWRDLI 59

Query: 287  CSEEWYSYRRKHNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGM 466
            CSEEWY YRRKH L+ETWIYALCRD+ N+I CYVLDP +S+R W+ +  +P   + RKGM
Sbjct: 60   CSEEWYHYRRKHKLDETWIYALCRDKSNEIFCYVLDPTTSRRYWKLLDGLPPHISNRKGM 119

Query: 467  SFEALGNKIYLLGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAI 646
             FEALGNK++LLGGC  F D+TDE Y YD S N W + A++S ARCYFACE L+EK+YAI
Sbjct: 120  GFEALGNKLFLLGGCSGFLDSTDEAYSYDASSNCWVEAASLSNARCYFACEVLDEKLYAI 179

Query: 647  GGVGSNSSDPLSWDTYDPRTNSWTSYSDLNVVPDIEESVVMDAKIYIRCGASSTIPPHVY 826
            GG+ SNSSD  SWDT+DP T  WT + D N+  DIE+SVV+D KIY RC   + + PH +
Sbjct: 180  GGLVSNSSDN-SWDTFDPLTKCWTFHIDPNIASDIEDSVVLDGKIYTRCARHTDVAPHAF 238

Query: 827  SVVYEPSNGTWQHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRL 1006
            +VVYEPS+GTWQ+AD DMVSGW GP++VV   LYVLD++ GTRLMMW KE ++W+ +G+L
Sbjct: 239  AVVYEPSSGTWQYADADMVSGWTGPAVVVYGTLYVLDQSLGTRLMMWHKERREWIPVGKL 298

Query: 1007 SPLLTRPPCRLAVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCK 1186
            SPLLTRPPC+L  VG  I ++GK LSTVV+DVG+  N G V++ SSIP L SD +VISCK
Sbjct: 299  SPLLTRPPCQLVAVGKSIFIVGKTLSTVVVDVGDLGNEGQVMMGSSIPGLLSDFNVISCK 358

Query: 1187 TMSL 1198
             +S+
Sbjct: 359  CLSI 362


>ref|XP_004134327.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Cucumis sativus]
            gi|449480385|ref|XP_004155879.1| PREDICTED:
            F-box/kelch-repeat protein SKIP4-like [Cucumis sativus]
          Length = 358

 Score =  447 bits (1150), Expect = e-123
 Identities = 210/357 (58%), Positives = 271/357 (75%), Gaps = 1/357 (0%)
 Frame = +2

Query: 131  SN*LETMQQLEPIHTPLISGLPDDIALFCLARVPRRYHTLLKCVSRRWKELVCSEEWYSY 310
            SN LE +    P    LI  LPDDIAL  L+RVPR+YH  LKCVS RWK LV S+EWY+ 
Sbjct: 7    SNGLEELTP--PPGRSLIHSLPDDIALSILSRVPRKYHHNLKCVSNRWKGLVNSQEWYAR 64

Query: 311  RRKHNLEETWIYALCRDRINQICCYVLDPNSSKRCWRPIRDIPSQCTKRKGMSFEALGNK 490
            R K+NL ETWIYALCRD+  Q+ CYVLD NSSKRCW+ +++ P+   KRKGM FEA+G K
Sbjct: 65   REKNNLAETWIYALCRDKSEQVSCYVLDLNSSKRCWKQMKNWPTCSFKRKGMGFEAMGRK 124

Query: 491  IYLLGGCGWFQDATDEVYCYDTSKNSWDKVAAMSTARCYFACEALNEKIYAIGGVGSNSS 670
            +Y+LGGC W +DA+DEVYCYDTS NSW  VA +S+ARCYFACE LNEK+Y IGG+  +S 
Sbjct: 125  LYVLGGCSWSEDASDEVYCYDTSINSWTPVAQLSSARCYFACEVLNEKLYTIGGICPSSG 184

Query: 671  DPLSWDTYDPRTNSWTSYSDL-NVVPDIEESVVMDAKIYIRCGASSTIPPHVYSVVYEPS 847
            D  SWD YDP TN+W  Y D+ N+  +IE+S+VMD KIYIR  ++ +    VY++VY+PS
Sbjct: 185  DLHSWDVYDPSTNTWEPYLDITNIQNEIEDSIVMDGKIYIRLRSADS---QVYALVYDPS 241

Query: 848  NGTWQHADNDMVSGWRGPSIVVNDVLYVLDETSGTRLMMWQKESKDWVALGRLSPLLTRP 1027
            +G WQH++++MVSGWRGP+++V+  LYVLD++SGTRLMMW  E K W+ +GR S LLTRP
Sbjct: 242  SGMWQHSNSEMVSGWRGPAVIVDKTLYVLDQSSGTRLMMWNNEDKGWIPVGRFSSLLTRP 301

Query: 1028 PCRLAVVGNCIIVIGKGLSTVVIDVGEARNMGGVVVSSSIPKLASDDDVISCKTMSL 1198
            PC+L  VG  I+V+GKGLS+V+ DV   + M G++VSSSIP+L SD DV++CK  ++
Sbjct: 302  PCKLVGVGTKIVVVGKGLSSVIFDVSNVKTMMGLMVSSSIPRLDSDIDVLACKCTTI 358