BLASTX nr result

ID: Coptis24_contig00008164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008164
         (1572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258...   551   e-154
emb|CBI40561.3| unnamed protein product [Vitis vinifera]              532   e-148
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]   528   e-147
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247...   519   e-144
ref|XP_002516668.1| transcription factor, putative [Ricinus comm...   490   e-136

>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
          Length = 1035

 Score =  551 bits (1419), Expect = e-154
 Identities = 259/399 (64%), Positives = 305/399 (76%)
 Frame = -2

Query: 1541 DNCHTSIVDIHRSCPNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDE 1362
            DNC+TSIVD HRSCPN DCSYDLCL CCRELREG QPGG+EA++SHQQF+ER + Q  D 
Sbjct: 313  DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADG 372

Query: 1361 NGLSGALRKGSGRQTPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLEL 1182
               +   RK +GR + V LA+++       QFPDW+A GDGSIPCPPKERGGCG  +LEL
Sbjct: 373  KSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILEL 432

Query: 1181 RRNFNAHWVLELLNNAEELTRNCQFSDXXXXXXXXXXXXXXXXXXXXXXSEVRQAAFREN 1002
            RRNF A+WV++L+ ++E+L  + Q  D                      SE+R+AAFR++
Sbjct: 433  RRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSEQNSEMRKAAFRKH 492

Query: 1001 SHDNFLYCPNSVLLKYDEIEHFQSHWTRGEPIIVRNVLANSSGLSWDPMVMRRAIKGASS 822
             HDNFL+CPN+V +  DEIEHFQ HW RGEP+IVRNVL  +SGLSW+PMVM RA +   +
Sbjct: 493  GHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWEPMVMWRAFRETGA 552

Query: 821  KAELEEERLSVKAIDCLDWCEVEINISQFFKGYVEGRMYKNGWPEMLKLKDWPSSTSFED 642
            K + +EE  +VKAIDCLDWCEVEINI QFF GY+EGRM+K GWPEMLKLKDWPSST FE+
Sbjct: 553  KTKFKEETRTVKAIDCLDWCEVEINIHQFFAGYLEGRMHKGGWPEMLKLKDWPSSTLFEE 612

Query: 641  RLPRHGAEFIATLPYSDYTHPTSGLLNLATKLPENSAKPDLGPKTYIAYGFREDLGRGDS 462
            RLPRHGAEFIA LPY DYT P SG LN+ATKLP  S KPDLGPKTYIAYGF  +LGRGDS
Sbjct: 613  RLPRHGAEFIAALPYCDYTDPKSGFLNIATKLPTESLKPDLGPKTYIAYGFPLELGRGDS 672

Query: 461  VTKLHCDMSDAVNVLTHTAEVNITPWQHNTIRNMQKEHA 345
            VTKLHCDMSDAVNVLTHTA+V + PWQH  I+ MQK+HA
Sbjct: 673  VTKLHCDMSDAVNVLTHTAKVKVAPWQHKRIKTMQKKHA 711


>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
          Length = 897

 Score =  532 bits (1370), Expect = e-148
 Identities = 253/399 (63%), Positives = 296/399 (74%)
 Frame = -2

Query: 1541 DNCHTSIVDIHRSCPNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDE 1362
            DNC+TSIVD HRSCPN DCSYDLCL CCRELREG QPGG+EA++SHQQF+ER + Q    
Sbjct: 289  DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQ---- 344

Query: 1361 NGLSGALRKGSGRQTPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLEL 1182
                              LA+++       QFPDW+A GDGSIPCPPKERGGCG  +LEL
Sbjct: 345  ------------------LAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILEL 386

Query: 1181 RRNFNAHWVLELLNNAEELTRNCQFSDXXXXXXXXXXXXXXXXXXXXXXSEVRQAAFREN 1002
            RRNF A+WV++L+ ++E+L  + Q  D                      SE+R+AAFR++
Sbjct: 387  RRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSEQNSEMRKAAFRKH 446

Query: 1001 SHDNFLYCPNSVLLKYDEIEHFQSHWTRGEPIIVRNVLANSSGLSWDPMVMRRAIKGASS 822
             HDNFL+CPN+V +  DEIEHFQ HW RGEP+IVRNVL  +SGLSW+PMVM RA +   +
Sbjct: 447  GHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWEPMVMWRAFRETGA 506

Query: 821  KAELEEERLSVKAIDCLDWCEVEINISQFFKGYVEGRMYKNGWPEMLKLKDWPSSTSFED 642
            K + +EE  +VKAIDCLDWCEVEINI QFF GY+EGRM+K GWPEMLKLKDWPSST FE+
Sbjct: 507  KTKFKEETRTVKAIDCLDWCEVEINIHQFFAGYLEGRMHKGGWPEMLKLKDWPSSTLFEE 566

Query: 641  RLPRHGAEFIATLPYSDYTHPTSGLLNLATKLPENSAKPDLGPKTYIAYGFREDLGRGDS 462
            RLPRHGAEFIA LPY DYT P SG LN+ATKLP  S KPDLGPKTYIAYGF  +LGRGDS
Sbjct: 567  RLPRHGAEFIAALPYCDYTDPKSGFLNIATKLPTESLKPDLGPKTYIAYGFPLELGRGDS 626

Query: 461  VTKLHCDMSDAVNVLTHTAEVNITPWQHNTIRNMQKEHA 345
            VTKLHCDMSDAVNVLTHTA+V + PWQH  I+ MQK+HA
Sbjct: 627  VTKLHCDMSDAVNVLTHTAKVKVAPWQHKRIKTMQKKHA 665


>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
          Length = 1160

 Score =  528 bits (1359), Expect = e-147
 Identities = 260/452 (57%), Positives = 305/452 (67%), Gaps = 53/452 (11%)
 Frame = -2

Query: 1541 DNCHTSIVDIHRSCPNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDE 1362
            DNC+TSIVD HRSCPN DCSYDLCL CCRELREG QPGG+EA++SHQQF+ER + Q  D 
Sbjct: 313  DNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVADG 372

Query: 1361 NGLSGALRKGSGRQTPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLEL 1182
               +   RK +GR + V LA+++       QFPDW+A GDGSIPCPPKERGGCG  +LEL
Sbjct: 373  KSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKERGGCGTAILEL 432

Query: 1181 RRNFNAHWVLELLNNAEELTRNCQFSDXXXXXXXXXXXXXXXXXXXXXXSEVRQAAFREN 1002
            RRNF A+WV++L+ ++E+L  + Q  D                      SE+R+AAFR++
Sbjct: 433  RRNFKANWVMKLIQSSEDLICHYQLPDHNFSQGCSLCWPNVTGRNSEQNSEMRKAAFRKH 492

Query: 1001 SHDNFLYCPNSVLLKYDEIEHFQSHWTRGEPIIVRNVLANSSGLSWDPMVMRRAIKGASS 822
             HDNFLYCPN+V +  DEIEHFQ HW RGEP+IVRNVL  +SGLSW+PMVM RA +   +
Sbjct: 493  GHDNFLYCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGLSWEPMVMWRAFRETGA 552

Query: 821  KAELEEERLSVKAIDCLDWCEVEINISQFFKGYVEGRMYKNGWPEMLKLKDWPSSTSFED 642
            K + +EE  +VKAIDCLDWCEVEINI QFF GY+EGRM+K GWPEMLKLKDWPSST FE+
Sbjct: 553  KTKFKEETRTVKAIDCLDWCEVEINIHQFFAGYLEGRMHKGGWPEMLKLKDWPSSTLFEE 612

Query: 641  RLPRHGAEFIATLPYSDYTHPTSGLLNLATKLPENSAKPDLGPKTYIAYGFREDLGRGDS 462
            RLPRHGAEFIA LPY DYT P SG LN+ATKLP  S KPDLGPKTYIAYGF  +LGRGDS
Sbjct: 613  RLPRHGAEFIAALPYCDYTDPKSGFLNIATKLPTESLKPDLGPKTYIAYGFPLELGRGDS 672

Query: 461  VTKLHCDMSDA------------------------------------------------- 429
            VTKLHCDMSDA                                                 
Sbjct: 673  VTKLHCDMSDAALQGLDSELATRGFLLAPGTSNCAGTFIEAHPQGTLELLTCAPIILHFL 732

Query: 428  ----VNVLTHTAEVNITPWQHNTIRNMQKEHA 345
                VNVLTHTA+V + PWQH  I+ MQK+HA
Sbjct: 733  PQVWVNVLTHTAKVKVAPWQHKRIKTMQKKHA 764


>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
          Length = 1876

 Score =  519 bits (1336), Expect = e-144
 Identities = 256/401 (63%), Positives = 298/401 (74%)
 Frame = -2

Query: 1541 DNCHTSIVDIHRSCPNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDE 1362
            DNC+TSIV++HRSCPN DCSYDLCLTCCRELR+G QPGGNEA+SSHQQF+ER N Q  + 
Sbjct: 1205 DNCNTSIVNLHRSCPNPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERVNGQGTEV 1264

Query: 1361 NGLSGALRKGSGRQTPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLEL 1182
             G   A  +  G ++  A  +NN      C FPDW+ N DGSIPCPPK RGGCG   LEL
Sbjct: 1265 KGRIPAHDERYGWESDGAHPTNN-YAADTCDFPDWRVNMDGSIPCPPKARGGCGTETLEL 1323

Query: 1181 RRNFNAHWVLELLNNAEELTRNCQFSDXXXXXXXXXXXXXXXXXXXXXXSEVRQAAFREN 1002
            RR F  +WV  L+ +AE+LT N    D                       EVR+AAFREN
Sbjct: 1324 RRIFEPNWVDHLIKSAEDLTMNFGSPDIDFSQGCSLCLPTASTGSGEKHCEVRRAAFREN 1383

Query: 1001 SHDNFLYCPNSVLLKYDEIEHFQSHWTRGEPIIVRNVLANSSGLSWDPMVMRRAIKGASS 822
            SHD+FLYCPNS  L  +EIEHFQ HW RGEP+IVRNVL  +SGLSWDPMVM RA +GA+ 
Sbjct: 1384 SHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNVLEKTSGLSWDPMVMWRAFRGATK 1443

Query: 821  KAELEEERLSVKAIDCLDWCEVEINISQFFKGYVEGRMYKNGWPEMLKLKDWPSSTSFED 642
               L+E+ LSVKAIDC DWCEV+INI QFFKGY++GR +K+GWPEMLKLKDWP S SF++
Sbjct: 1444 V--LKEDALSVKAIDCFDWCEVQINIFQFFKGYLQGRRHKSGWPEMLKLKDWPPSNSFDE 1501

Query: 641  RLPRHGAEFIATLPYSDYTHPTSGLLNLATKLPENSAKPDLGPKTYIAYGFREDLGRGDS 462
             LPRHGAEFIA LPYSDYT+P SGLLNLATKLP+   KPDLGPKTYIAYG  E+LGRG+S
Sbjct: 1502 CLPRHGAEFIAMLPYSDYTNPKSGLLNLATKLPD-VLKPDLGPKTYIAYGSLEELGRGNS 1560

Query: 461  VTKLHCDMSDAVNVLTHTAEVNITPWQHNTIRNMQKEHAKE 339
            VTKLHCD+SDAVNVLTHTA+VNITP Q   +  +QK++  E
Sbjct: 1561 VTKLHCDISDAVNVLTHTAKVNITPLQSKIMNKLQKKYEAE 1601


>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
            gi|223544163|gb|EEF45687.1| transcription factor,
            putative [Ricinus communis]
          Length = 939

 Score =  490 bits (1262), Expect = e-136
 Identities = 259/487 (53%), Positives = 320/487 (65%)
 Frame = -2

Query: 1541 DNCHTSIVDIHRSCPNVDCSYDLCLTCCRELREGFQPGGNEADSSHQQFIERGNNQDIDE 1362
            DNC+TSIV+ HRSC +  CSYDLCLTCC E+R+G Q GGN+A+SS  QF+ER N QD   
Sbjct: 292  DNCNTSIVNFHRSCSDPGCSYDLCLTCCSEIRKGIQSGGNDAESSLHQFVERVNGQDTYL 351

Query: 1361 NGLSGALRKGSGRQTPVALASNNCMTRSCCQFPDWKANGDGSIPCPPKERGGCGNGLLEL 1182
            N    A +K    +  V+   N C T S    PDW+A  DG I CPPK RGGCG G+L +
Sbjct: 352  NDQITANQKRFCCEMQVSHLVNKCDTESSNDSPDWRAETDGQISCPPKARGGCGTGMLVM 411

Query: 1181 RRNFNAHWVLELLNNAEELTRNCQFSDXXXXXXXXXXXXXXXXXXXXXXSEVRQAAFREN 1002
            RR F A+ V EL+ N EEL  N +  D                       EVR+AA RE 
Sbjct: 412  RRVFEANMVKELIKNTEELIINYKPPDTDSFQGCYLCRPFSSTDCIMKDFEVRKAADREK 471

Query: 1001 SHDNFLYCPNSVLLKYDEIEHFQSHWTRGEPIIVRNVLANSSGLSWDPMVMRRAIKGASS 822
            S DNFLYCPN++ L  +EIEHFQ HW RGEP+IVRNVL  +SGLSW+PMVM RA++GA  
Sbjct: 472  SDDNFLYCPNALWLGDNEIEHFQMHWMRGEPVIVRNVLDKTSGLSWEPMVMWRALRGA-- 529

Query: 821  KAELEEERLSVKAIDCLDWCEVEINISQFFKGYVEGRMYKNGWPEMLKLKDWPSSTSFED 642
            K  L+EE   VKAIDCLDWCEVEI I QFFKGY+EGR Y+NGWPEMLKLKDWP S SFE+
Sbjct: 530  KKILKEEAQRVKAIDCLDWCEVEITIFQFFKGYLEGRKYRNGWPEMLKLKDWPPSNSFEE 589

Query: 641  RLPRHGAEFIATLPYSDYTHPTSGLLNLATKLPENSAKPDLGPKTYIAYGFREDLGRGDS 462
             LPRHGAEFIA LP+S+YTHP SGLLNLAT+LP    KPDLGPKTYIAYG +E+LGRGDS
Sbjct: 590  CLPRHGAEFIAMLPFSEYTHPKSGLLNLATRLPA-VLKPDLGPKTYIAYGSKEELGRGDS 648

Query: 461  VTKLHCDMSDAVNVLTHTAEVNITPWQHNTIRNMQKEHAKEMYACTENRVIGDADLQLSA 282
            VTKLHCD+SDAVNVLTH  EV I  WQ   I  +Q+++ +E     +   I    L+ S 
Sbjct: 649  VTKLHCDISDAVNVLTHMTEVKIPTWQRKIIGKLQQQYEEE-----DLHQISGGMLKASG 703

Query: 281  EMDLDVHIQDQQDSHLKRSSALKCAELPETNSLLERDDMVEIQLNKQKLEGRESSSRCIC 102
                    + ++D  +    + K  E+ E  S LE   + +++L++++ + +E S+   C
Sbjct: 704  TFGRKARKRTRKDERIDPELSQK-VEIIECESSLESLYIQKMKLDEERNKSQELSTMGSC 762

Query: 101  DIRECEP 81
             I+E  P
Sbjct: 763  SIQESLP 769


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