BLASTX nr result

ID: Coptis24_contig00008133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008133
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270134.1| PREDICTED: uncharacterized protein LOC100255...   333   5e-89
ref|XP_002276629.1| PREDICTED: uncharacterized protein LOC100248...   307   4e-81
ref|XP_002309180.1| predicted protein [Populus trichocarpa] gi|2...   291   2e-76
ref|XP_002319964.1| predicted protein [Populus trichocarpa] gi|2...   287   4e-75
ref|XP_002326076.1| predicted protein [Populus trichocarpa] gi|2...   281   2e-73

>ref|XP_002270134.1| PREDICTED: uncharacterized protein LOC100255128 [Vitis vinifera]
          Length = 396

 Score =  333 bits (855), Expect = 5e-89
 Identities = 203/405 (50%), Positives = 244/405 (60%), Gaps = 17/405 (4%)
 Frame = +2

Query: 188  MGNYKFRLSDMMPNAWFYKLKDMGKPRTHNTSSQSQHQIKKKH------LPAIPTSQPQF 349
            MGNYKFRLSDMMPNAWFYKLKDMG+ R HN    S H IKKK         A    QP  
Sbjct: 1    MGNYKFRLSDMMPNAWFYKLKDMGRGRGHN----SGHSIKKKQSTKTAAAQAGKPKQPHR 56

Query: 350  INHRHSYYFTTEPINISDKLYNSPINPKSSDVHFPDPPXXXXXXXXXXXXXXXXXXXXXX 529
               R SYYFT +PI+ SD  ++SP NPK SD +FPDPP                      
Sbjct: 57   DCPRKSYYFTRDPIS-SDGFFHSPTNPKVSDTNFPDPPRRSSKQRVRRRALRSSPRLVTS 115

Query: 530  XXXXXXXGCNCRATLDSVWSNTXXXXXXXXXXXEHNLDG-SLFPEFGXXXXXXXXXXXXX 706
                   GC+CRATL+SVW+ +           + + DG SL PE G             
Sbjct: 116  SVSA---GCSCRATLESVWTKSDSTPDFWDSPLDSSPDGVSLLPELGSDRIQSAESFDGM 172

Query: 707  XXXXXXXX------TTDIIIDMDSKITSNSTQKLDKFDVFDELELPPILTKPAKFSDMVS 868
                            D +ID++ K  S    KLD F+   EL+LPPI+TKPAKF++MV+
Sbjct: 173  VSWASSCSCRVDSTANDFVIDVEEKSFSRKFDKLDGFETISELDLPPIITKPAKFNEMVN 232

Query: 869  EIKNKD-TEHVNYRRGSVKFEEKKITKHVSVK---EESIKTHKEQKTSPTIRRTSPNSPG 1036
            +IK K+ TE V  RR S KFEE+     +SVK   EESI   K+QK SP +RR S NSPG
Sbjct: 233  DIKKKEMTEPVKVRRSSAKFEERNAHGSLSVKIVKEESIGM-KKQKPSP-VRRFSGNSPG 290

Query: 1037 MKLRLNSPRIASKKIQAYXXXXXXXXXXXXXXXXNLSDSFAIVKSSFDPQRDFRESMVEM 1216
            ++LR NSPRIAS+KIQ++                +LSDSFAIVKSSFDPQRDFR+SM+EM
Sbjct: 291  VRLRNNSPRIASRKIQSHGRKSVSSTSSSSSRR-SLSDSFAIVKSSFDPQRDFRDSMMEM 349

Query: 1217 IVENNIKASKDLEELLACYLSLNSNEYHDIIVKVFEQIWFDLTDI 1351
            IVENNI+ASKDLEELLACYLSLNS+EYHDII+KVF+QIWFD+ D+
Sbjct: 350  IVENNIRASKDLEELLACYLSLNSDEYHDIIIKVFKQIWFDIPDV 394


>ref|XP_002276629.1| PREDICTED: uncharacterized protein LOC100248417 [Vitis vinifera]
          Length = 387

 Score =  307 bits (787), Expect = 4e-81
 Identities = 178/401 (44%), Positives = 227/401 (56%), Gaps = 11/401 (2%)
 Frame = +2

Query: 188  MGNYKFRLSDMMPNAWFYKLKDMGKPRTHNTSSQSQHQIKKKHLPAIPTSQPQFINHRHS 367
            MGNY+FRLSDMMPNAWFYKLKDM + R HNT+   +   KK   PA  + +      R+S
Sbjct: 1    MGNYRFRLSDMMPNAWFYKLKDMSRARNHNTAQSIK---KKLPSPAATSQKTNLSQPRYS 57

Query: 368  YYFTTEPINISDKLYNSPINPKSSDVHFPDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 547
            YY+  EPI  +D LY SP+NPK+SD HFPDPP                            
Sbjct: 58   YYYNEEPIR-ADMLYGSPVNPKASDTHFPDPPRKSSKRRPKRKTIYKPSPTLVSSVSA-- 114

Query: 548  XGCNCRATLDSVWS--NTXXXXXXXXXXXEHNLDGSLFPEFGXXXXXXXXXXXXXXXXXX 721
             G  C A  +SVW+  +            E   + SL PE G                  
Sbjct: 115  -GYGCPAAFESVWTEHDPTESEDCFVSAIEPGHNVSLLPEVGPNTDVASDTFNGLAPLST 173

Query: 722  XXX------TTDIIIDMDSKITSNSTQKLDKFDVFDELELPPILTKPAKFSDMVSEIKNK 883
                     TTDI ID+  K  S+  +KLD+FD   ELELP + TKPA+F +        
Sbjct: 174  SCSCRVCSSTTDIFIDVSKKSFSSKVEKLDEFDTVSELELPQVSTKPARFRETT------ 227

Query: 884  DTEHVNYRRGSVKFEEKKITKHVS---VKEESIKTHKEQKTSPTIRRTSPNSPGMKLRLN 1054
              E   +RR S + EE K  + +S   VKE S +T KE K +P +R+ + N+ G+KLR N
Sbjct: 228  -VEAARHRRSSSQLEEIKAQRSLSIKIVKEGSKQTQKEPKANPLVRKPTANAAGVKLRTN 286

Query: 1055 SPRIASKKIQAYXXXXXXXXXXXXXXXXNLSDSFAIVKSSFDPQRDFRESMVEMIVENNI 1234
            SPR+AS+KIQAY                +LS+S A+VK+SFDP+RDFR+SM+EMIVENNI
Sbjct: 287  SPRLASRKIQAYARKSVYSRTSSKAQSRSLSESCAVVKASFDPERDFRDSMLEMIVENNI 346

Query: 1235 KASKDLEELLACYLSLNSNEYHDIIVKVFEQIWFDLTDIQL 1357
            +ASKDLEELLACYLSLNS+EYHD+IVK FEQIWFD +D+++
Sbjct: 347  RASKDLEELLACYLSLNSDEYHDLIVKAFEQIWFDTSDLRM 387


>ref|XP_002309180.1| predicted protein [Populus trichocarpa] gi|222855156|gb|EEE92703.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  291 bits (746), Expect = 2e-76
 Identities = 187/419 (44%), Positives = 232/419 (55%), Gaps = 29/419 (6%)
 Frame = +2

Query: 188  MGNYKFRLSDMMPNAWFYKLKDMGKPRTHNTSSQSQHQIKKKHLPAI-----PTSQPQFI 352
            MGN +FRLSDMMPNAWFYKLK+MGK R HNT++   H IKK+   +      P S+P+  
Sbjct: 1    MGNNRFRLSDMMPNAWFYKLKEMGKTRNHNTTT---HSIKKRQATSAAETQQPPSKPKHP 57

Query: 353  NH----RHSYYFTTEPINISDKLYNSPINPKSSDVHFPDPPXXXXXXXXXXXXXXXXXXX 520
             +    R SYY T E I+     + SP N KS+  +FPDPP                   
Sbjct: 58   QYNPYPRKSYYITRELISSEQIPHTSPRNSKSTYTNFPDPPRRSSNQRNRRRTIKASPKH 117

Query: 521  XXXXXXXXXXGCNCRATLDSVWSNTXXXXXXXXXXXEHNLD------GSLFPEFGXXXXX 682
                      GCNCRATL   W+ +           + +LD       S  PEF      
Sbjct: 118  VSA-------GCNCRATL---WTKSDSPPDYSASLYDGSLDQETDFSDSFPPEFKSDSAL 167

Query: 683  XXXXXXXXXXXXXXXX-------TTDIIIDMDSKITSNSTQKLDKFDVFDELELPPILTK 841
                                      I+I +D K T+ +      F    +L+LPPI+TK
Sbjct: 168  ATVSFDKMLSWSSSCDCKLDSIDNDGIVISVDKKSTARNLDNPKVFHSISDLDLPPIVTK 227

Query: 842  PAKFSDMVSEIKNKDT-EHVNYRRGSVKFEEKKITKHVSVK---EESIKTHKEQKTSPTI 1009
            PAKF D + + K K+T E   YRR   K+EE      +SVK   EESI   KE KTS ++
Sbjct: 228  PAKFDDQLEDTKKKETQEPTKYRRSPAKYEETNAHASLSVKVVKEESIAV-KEYKTS-SV 285

Query: 1010 RRTSPNSPGMKLRLNSPRIASKKIQAYXXXXXXXXXXXXXXXXN---LSDSFAIVKSSFD 1180
            RR S  SPG++LR+NSPRI++KKIQAY                +   LSDS A+VKSSFD
Sbjct: 286  RRNSVTSPGVRLRVNSPRISNKKIQAYNNGRKSVSSTTSSSSRSRRSLSDSLAVVKSSFD 345

Query: 1181 PQRDFRESMVEMIVENNIKASKDLEELLACYLSLNSNEYHDIIVKVFEQIWFDLTDIQL 1357
            PQ+DFRESMVEMIVENNIKASKDLE+LLACYLSLNS+EYHD+I+KVF+QIWFDLTDI+L
Sbjct: 346  PQKDFRESMVEMIVENNIKASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDIKL 404


>ref|XP_002319964.1| predicted protein [Populus trichocarpa] gi|222858340|gb|EEE95887.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  287 bits (735), Expect = 4e-75
 Identities = 184/409 (44%), Positives = 224/409 (54%), Gaps = 19/409 (4%)
 Frame = +2

Query: 188  MGNYKFRLSDMMPNAWFYKLKDMGKPRTHNTSSQSQHQIKKKHLPAIPTSQPQFINH-RH 364
            MGNY+FRLSDM+PNAWFYKLKDM K R H TS  S    KKK  P   TSQ   I+H R+
Sbjct: 1    MGNYRFRLSDMIPNAWFYKLKDMSKSRKHYTSRAS----KKKPPPGTVTSQKPNISHQRY 56

Query: 365  SYYFTTEPINISDKLYNSPINPKSSDVHFPDPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 544
            SYYFTTEP       Y SP NPK+SD HFPDPP                           
Sbjct: 57   SYYFTTEPERAEKLDYYSPANPKASDTHFPDPPRKSSNRRNKRKTIYKPSPKLVSTFSAD 116

Query: 545  XXGCNCRATLDS-----VWSNTXXXXXXXXXXXEHNLD---------GSLFPEFGXXXXX 682
               C+CR T++S     +  ++              LD         G L P+       
Sbjct: 117  ---CSCRVTVNSNLTGFIPGDSPDCSSSPVESSYDELDFLSESDEDDGFLVPD---SIDH 170

Query: 683  XXXXXXXXXXXXXXXXTTDIIIDMDSKITSNSTQKLDKFDVFDELELPPILTKPAKFSDM 862
                            TTDIIIDM+ +      ++++ F    EL LPPILTKP KF+D 
Sbjct: 171  HLASWSSSCNCNVSSSTTDIIIDMNEESYERKIKEVEGFGRIPELNLPPILTKPEKFND- 229

Query: 863  VSEIKNKDTEHVNYRRGSVKFEEKKITKHVSVK---EESIKTHKEQKTSPTIRRTSPNSP 1033
                     E   +RR S K EE K  + +SVK   E+SI+T+KE+K +P  R++S NS 
Sbjct: 230  --------NEVTKFRRSSSKLEEVKAHRSLSVKIVKEKSIRTYKEKKMNPPTRKSSVNSA 281

Query: 1034 -GMKLRLNSPRIASKKIQAYXXXXXXXXXXXXXXXXNLSDSFAIVKSSFDPQRDFRESMV 1210
             G+KLR N+PRIAS+KIQ                   LS+SFA+VK S DPQRDF++SMV
Sbjct: 282  KGIKLRANTPRIASRKIQG-----CSRKSVSLSRNKTLSESFAVVKFSVDPQRDFKDSMV 336

Query: 1211 EMIVENNIKASKDLEELLACYLSLNSNEYHDIIVKVFEQIWFDLTDIQL 1357
            EMIVENNI+ SKDLE+LLACYLSLNS EYH IIVK FEQIWFD+TD+ L
Sbjct: 337  EMIVENNIRGSKDLEDLLACYLSLNSKEYHYIIVKAFEQIWFDMTDLHL 385


>ref|XP_002326076.1| predicted protein [Populus trichocarpa] gi|222862951|gb|EEF00458.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  281 bits (720), Expect = 2e-73
 Identities = 179/408 (43%), Positives = 219/408 (53%), Gaps = 18/408 (4%)
 Frame = +2

Query: 188  MGNYKFRLSDMMPNAWFYKLKDMGKPRTHNTSSQSQHQIKKKHLPAIPTSQPQFINH-RH 364
            MGNY+FRLSDM+PNAWFYKLKDM K R   TS       KKK  P   TSQ   I+H R+
Sbjct: 1    MGNYRFRLSDMIPNAWFYKLKDMSKGRKQYTSQA----FKKKPPPGNVTSQKPNISHQRY 56

Query: 365  SYYFTTEPINISDKLYNSPINPKSSDVHFPDPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 544
            SY FTTEP       +NSP+N K+SD HFPD P                           
Sbjct: 57   SYCFTTEPGRAEKFHFNSPVNSKASDTHFPDLPRKSSNKRNKRKTIYKPSPKLVSTFSAD 116

Query: 545  XXGCNCRATLDSVWSNTXXXXXXXXXXXEHNL--------------DGSLFPEFGXXXXX 682
               C+CR T++S  + +                             DG L P+       
Sbjct: 117  ---CSCRVTVNSNLTKSIPGDSPDYSSSPAESSYDELDFLSESDEDDGFLVPD---SIDH 170

Query: 683  XXXXXXXXXXXXXXXXTTDIIIDMDSKITSNSTQKLDKFDVFDELELPPILTKPAKFSDM 862
                            T DIIIDM+ +      ++++ F    ELELP ILTKPAKF+D 
Sbjct: 171  QLSSWSSSCNCNVSSSTADIIIDMNEESYERKIKEVEGFGRIPELELPRILTKPAKFND- 229

Query: 863  VSEIKNKDTEHVNYRRGSVKFEEKKITKHVSVK---EESIKTHKEQKTSPTIRRTSPNSP 1033
                  K+TE   +RR S K E  K  + +SVK   E SI+T KEQK +P  R++S NS 
Sbjct: 230  ------KETEVTQFRRSSSKLEGVKAHRSLSVKIVNERSIRTRKEQKNNPPTRKSSANST 283

Query: 1034 GMKLRLNSPRIASKKIQAYXXXXXXXXXXXXXXXXNLSDSFAIVKSSFDPQRDFRESMVE 1213
            G+KLR N+PRIAS+KIQ                   LS+SFA+V SS DPQRDF++SMVE
Sbjct: 284  GIKLRANTPRIASRKIQT-----CARKGVSFSRNKTLSESFAVVMSSVDPQRDFKDSMVE 338

Query: 1214 MIVENNIKASKDLEELLACYLSLNSNEYHDIIVKVFEQIWFDLTDIQL 1357
            MIVENNI+ SKDLEELLACYLSLNS +YHD I+K FEQIWFD+TD+ L
Sbjct: 339  MIVENNIQDSKDLEELLACYLSLNSKKYHDFIIKAFEQIWFDMTDLHL 386


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