BLASTX nr result

ID: Coptis24_contig00008130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008130
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI41116.3| unnamed protein product [Vitis vinifera]              293   3e-77
ref|XP_002530645.1| conserved hypothetical protein [Ricinus comm...   277   2e-72
ref|XP_002327627.1| predicted protein [Populus trichocarpa] gi|2...   266   3e-69
ref|XP_003635601.1| PREDICTED: uncharacterized protein LOC100855...   263   3e-68
gb|ABK26915.1| unknown [Picea sitchensis]                             253   4e-65

>emb|CBI41116.3| unnamed protein product [Vitis vinifera]
          Length = 237

 Score =  293 bits (750), Expect = 3e-77
 Identities = 147/236 (62%), Positives = 185/236 (78%), Gaps = 3/236 (1%)
 Frame = -1

Query: 719 TIRHYHLRSRGFVEETGWNN-GLLLPYSVQAMDSKTNFSSVGHEFLRRFQSPTIFLKVAC 543
           TI H+ +R +GF+E   W + G L P+S Q  D + + SS+G  FLRRFQSPTIFLKV+C
Sbjct: 1   TISHHQMRKQGFLEGNKWQSWGQLHPFSAQTKDLRADVSSIGQGFLRRFQSPTIFLKVSC 60

Query: 542 EGDWLLPIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITERIVNT 363
           +GD+LLPIIVGEF++EKLI  LRED   +CP++FQF++++  KLGY+V MV+ITERIVNT
Sbjct: 61  DGDFLLPIIVGEFSVEKLIDTLREDAIVDCPNQFQFVRDLVGKLGYKVNMVKITERIVNT 120

Query: 362 YYARIFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQRGKNA 189
           Y+ARI+F KPGE  + + DARPSDAINVAK CKVPIYVNKQI+LTDA  I+YG  R ++ 
Sbjct: 121 YFARIYFSKPGENNIQSVDARPSDAINVAKLCKVPIYVNKQIILTDAIRIIYGMGRARDT 180

Query: 188 KSVYDVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKLQTPRYE 21
           KSVYDV LDSA +G DLLAEEL L+R++  AI EERY DA + RDKL KL+  R+E
Sbjct: 181 KSVYDVVLDSAADGPDLLAEELDLVRNMSLAIKEERYNDAALWRDKLMKLRESRHE 236


>ref|XP_002530645.1| conserved hypothetical protein [Ricinus communis]
           gi|223529818|gb|EEF31753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score =  277 bits (709), Expect = 2e-72
 Identities = 141/241 (58%), Positives = 182/241 (75%), Gaps = 6/241 (2%)
 Frame = -1

Query: 725 SKTIRHYHLRSRGFVEETGWN-NGLLLPYSVQAMDSKTNFSSVGHEFLRRFQSPTIFLKV 549
           S+T  HY +R +GF EET W   G   P+S    +S+ + S VG+EFLRRFQSPTIFLKV
Sbjct: 65  SETALHYRMRRQGFQEETTWRLPGRWSPFSAMIRESRRDTSFVGYEFLRRFQSPTIFLKV 124

Query: 548 ACEGDWLLPIIVGEFAIEKLIHALRE---DDDGECPSEFQFLKNVADKLGYEVKMVRITE 378
           +C+GD+LLPIIVGEFAIEKLI ALR    +DDG+CP +FQ ++N+ D+LGYEVKMVRITE
Sbjct: 125 SCDGDFLLPIIVGEFAIEKLIDALRGGDGNDDGDCPDQFQLVRNLVDRLGYEVKMVRITE 184

Query: 377 RIVNTYYARIFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQ 204
           R+ NTY+AR+F  KPGE  +++ DARPSDAIN+A RCK PI+V+KQIV TDA  I YG  
Sbjct: 185 RVANTYFARVFLSKPGENEVVSIDARPSDAINMAHRCKAPIHVSKQIVFTDAIRISYGMG 244

Query: 203 RGKNAKSVYDVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKLQTPRY 24
           R  + K  YDV+LDSA +G D LAEEL L+R++ +A+ EER+ DA + RDKL +L+   +
Sbjct: 245 RVHDRKPTYDVTLDSAADGPDSLAEELELVRNMNSAVKEERFNDAAMWRDKLMQLRQSMH 304

Query: 23  E 21
           +
Sbjct: 305 D 305


>ref|XP_002327627.1| predicted protein [Populus trichocarpa] gi|222836712|gb|EEE75105.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  266 bits (681), Expect = 3e-69
 Identities = 135/232 (58%), Positives = 176/232 (75%), Gaps = 5/232 (2%)
 Frame = -1

Query: 701 LRSRGFVEETGWNNG--LLLPYSVQAM-DSKTNFSSVGHEFLRRFQSPTIFLKVACEGDW 531
           +R +GF EE  W++   L+ P+ +Q   +++ N   +GH FLR FQSPTIFLKV+C+GD+
Sbjct: 1   MRKQGFQEEVRWHSSGKLVFPFGLQERKEARPNTGLLGHGFLRGFQSPTIFLKVSCDGDF 60

Query: 530 LLPIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITERIVNTYYAR 351
           +LPIIVGEFAIEKLI  ++ DD+  C  +FQ + NVA++LGY+VKMVRITER+ NTY+AR
Sbjct: 61  VLPIIVGEFAIEKLIDGIQGDDNAVCADQFQLVGNVAEELGYDVKMVRITERVANTYFAR 120

Query: 350 IFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQRGKNAKSVY 177
           + F KPGEK +L+ DARPSDAINVA RCK PIY++KQIVLTDA  I YG  R +N+K +Y
Sbjct: 121 LCFSKPGEKDILSVDARPSDAINVASRCKAPIYISKQIVLTDAIRIGYGVGRVRNSKPIY 180

Query: 176 DVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKLQTPRYE 21
           DVSLDSA +G D L EEL L+R++  A+ EERY DA + RDKL +L+  R E
Sbjct: 181 DVSLDSAADGPDSLVEELDLVRNMNLAVKEERYTDAAMWRDKLMELRKSRQE 232


>ref|XP_003635601.1| PREDICTED: uncharacterized protein LOC100855204 [Vitis vinifera]
          Length = 224

 Score =  263 bits (673), Expect = 3e-68
 Identities = 132/211 (62%), Positives = 167/211 (79%), Gaps = 3/211 (1%)
 Frame = -1

Query: 701 LRSRGFVEETGWNN-GLLLPYSVQAMDSKTNFSSVGHEFLRRFQSPTIFLKVACEGDWLL 525
           +R +GF+E   W + G L P+S Q  D + + SS+G  FLRRFQSPTIFLKV+C+GD+LL
Sbjct: 1   MRKQGFLEGNKWQSWGQLHPFSAQTKDLRADVSSIGQGFLRRFQSPTIFLKVSCDGDFLL 60

Query: 524 PIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITERIVNTYYARIF 345
           PIIVGEF++EKLI  LRED   +CP++FQF++++  KLGY+V MV+ITERIVNTY+ARI+
Sbjct: 61  PIIVGEFSVEKLIDTLREDAIVDCPNQFQFVRDLVGKLGYKVNMVKITERIVNTYFARIY 120

Query: 344 FCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDA--IVYGTQRGKNAKSVYDV 171
           F KPGE  + + DARPSDAINVAK CKVPIYVNKQI+LTDA  I+YG  R ++ KSVYDV
Sbjct: 121 FSKPGENNIQSVDARPSDAINVAKLCKVPIYVNKQIILTDAIRIIYGMGRARDTKSVYDV 180

Query: 170 SLDSAEEGTDLLAEELHLIRSLYTAITEERY 78
            LDSA +G DLLAEEL L+R++  AI EE +
Sbjct: 181 VLDSAADGPDLLAEELDLVRNMSLAIKEESF 211


>gb|ABK26915.1| unknown [Picea sitchensis]
          Length = 352

 Score =  253 bits (646), Expect = 4e-65
 Identities = 134/241 (55%), Positives = 173/241 (71%), Gaps = 11/241 (4%)
 Frame = -1

Query: 725 SKTIRHYHLRSRGFVEETG-WNNG--LLLPYSVQAMDSKTNFSSVGHEFLRRFQSPTIFL 555
           ++ ++H  LR +G    +G W++   L  P +          S + H  LRRF++PTIFL
Sbjct: 105 TELLKHQQLRKQGLSGASGLWHSSDQLTTPINEAKESEADQISLIEHGLLRRFRNPTIFL 164

Query: 554 KVACEGDWLLPIIVGEFAIEKLIHALREDDDGECPSEFQFLKNVADKLGYEVKMVRITER 375
           ++AC+G+ LLPIIVGEFAI KLI AL ED+ G  P+ FQ ++++   LGYEV+M+RITER
Sbjct: 165 RIACDGNLLLPIIVGEFAIGKLIDALHEDEKGGRPNPFQLMRDLVGTLGYEVRMIRITER 224

Query: 374 IVNTYYARIFFCKPGEKAMLTADARPSDAINVAKRCKVPIYVNKQIVLTDAI--VYGTQ- 204
           +VNTYYARI+  KPGEK ML+ DARPSDAIN+AKRCKVPIYVNK IV TDAI  VYGT  
Sbjct: 225 VVNTYYARIYIGKPGEKVMLSVDARPSDAINLAKRCKVPIYVNKAIVTTDAIKLVYGTPQ 284

Query: 203 -----RGKNAKSVYDVSLDSAEEGTDLLAEELHLIRSLYTAITEERYQDAVILRDKLTKL 39
                RG + KS YD+SLDSA EG DL+AEEL L+R++  A+ EERY+DA + RD+L KL
Sbjct: 285 ILGKWRGNSRKSSYDLSLDSAAEGPDLIAEELILVRNMLIAVVEERYKDAALWRDELNKL 344

Query: 38  Q 36
           +
Sbjct: 345 R 345


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