BLASTX nr result

ID: Coptis24_contig00008129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008129
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285016.2| PREDICTED: uncharacterized protein LOC100267...    48   1e-08
emb|CAN81802.1| hypothetical protein VITISV_007014 [Vitis vinifera]    48   1e-08
emb|CBI20294.3| unnamed protein product [Vitis vinifera]               48   1e-08
ref|XP_003596759.1| hypothetical protein MTR_2g085330 [Medicago ...    56   1e-05
ref|XP_003596760.1| hypothetical protein MTR_2g085330 [Medicago ...    56   1e-05

>ref|XP_002285016.2| PREDICTED: uncharacterized protein LOC100267528 [Vitis vinifera]
          Length = 627

 Score = 48.1 bits (113), Expect(2) = 1e-08
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = -2

Query: 988 QVIYELQGLTLEEKRCKQILYGKKKEMEHEQQTLQKLRTACIARKEWAFGPCLSEEELND 809
           Q++ +L+ L  E+++ + I+ GK+KEME  Q  L KLR+   A +E     C SEEELND
Sbjct: 129 QMLSQLKSLKAEDEQFRMIVDGKRKEMEPLQHALGKLRSTNSANRERGGTLCSSEEELND 188



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 26/57 (45%), Positives = 33/57 (57%)
 Frame = -3

Query: 804 LRHSMQSKSRTVVDEK*LLRETKPLGDTREKVISYQAMEEAAIQYSLTWLSLFNDQL 634
           L + MQ +S  + +EK +LRE K L  TREKVI+  AM  A IQ SL       DQ+
Sbjct: 193 LHYHMQHESIPLAEEKQILREIKQLEATREKVIAGAAM-RAKIQDSLGQKEAIQDQV 248


>emb|CAN81802.1| hypothetical protein VITISV_007014 [Vitis vinifera]
          Length = 536

 Score = 48.1 bits (113), Expect(2) = 1e-08
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = -2

Query: 988 QVIYELQGLTLEEKRCKQILYGKKKEMEHEQQTLQKLRTACIARKEWAFGPCLSEEELND 809
           Q++ +L+ L  E+++ + I+ GK+KEME  Q  L KLR+   A +E     C SEEELND
Sbjct: 129 QMLSQLKSLKAEDEQFRMIVDGKRKEMEPLQHALGKLRSTNSANRERGGTLCSSEEELND 188



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 26/57 (45%), Positives = 33/57 (57%)
 Frame = -3

Query: 804 LRHSMQSKSRTVVDEK*LLRETKPLGDTREKVISYQAMEEAAIQYSLTWLSLFNDQL 634
           L + MQ +S  + +EK +LRE K L  TREKVI+  AM  A IQ SL       DQ+
Sbjct: 193 LHYHMQHESIPLAEEKQILREIKQLEATREKVIAGAAM-RAKIQDSLGQKEAIQDQV 248


>emb|CBI20294.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 48.1 bits (113), Expect(2) = 1e-08
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = -2

Query: 988 QVIYELQGLTLEEKRCKQILYGKKKEMEHEQQTLQKLRTACIARKEWAFGPCLSEEELND 809
           Q++ +L+ L  E+++ + I+ GK+KEME  Q  L KLR+   A +E     C SEEELND
Sbjct: 159 QMLSQLKSLKAEDEQFRMIVDGKRKEMEPLQHALGKLRSTNSANRERGGTLCSSEEELND 218



 Score = 38.1 bits (87), Expect(2) = 1e-08
 Identities = 26/57 (45%), Positives = 33/57 (57%)
 Frame = -3

Query: 804 LRHSMQSKSRTVVDEK*LLRETKPLGDTREKVISYQAMEEAAIQYSLTWLSLFNDQL 634
           L + MQ +S  + +EK +LRE K L  TREKVI+  AM  A IQ SL       DQ+
Sbjct: 223 LHYHMQHESIPLAEEKQILREIKQLEATREKVIAGAAM-RAKIQDSLGQKEAIQDQV 278


>ref|XP_003596759.1| hypothetical protein MTR_2g085330 [Medicago truncatula]
           gi|355485807|gb|AES67010.1| hypothetical protein
           MTR_2g085330 [Medicago truncatula]
          Length = 609

 Score = 55.8 bits (133), Expect(2) = 1e-05
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -2

Query: 628 EQNAYYNQSRSLLDNARNMAAKNDIAALQKLSQTEGEQFMLL 503
           E N+Y+ QSR+LL  AR +AAK D+AA+ +LSQTEGE+FM L
Sbjct: 311 EGNSYFYQSRTLLTKARELAAKKDVAAIDELSQTEGEKFMAL 352



 Score = 20.8 bits (42), Expect(2) = 1e-05
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 500 RKLSRDGRMR 471
           R+LSRDGR+R
Sbjct: 374 RQLSRDGRIR 383


>ref|XP_003596760.1| hypothetical protein MTR_2g085330 [Medicago truncatula]
           gi|355485808|gb|AES67011.1| hypothetical protein
           MTR_2g085330 [Medicago truncatula]
          Length = 600

 Score = 55.8 bits (133), Expect(2) = 1e-05
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -2

Query: 628 EQNAYYNQSRSLLDNARNMAAKNDIAALQKLSQTEGEQFMLL 503
           E N+Y+ QSR+LL  AR +AAK D+AA+ +LSQTEGE+FM L
Sbjct: 302 EGNSYFYQSRTLLTKARELAAKKDVAAIDELSQTEGEKFMAL 343



 Score = 20.8 bits (42), Expect(2) = 1e-05
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 500 RKLSRDGRMR 471
           R+LSRDGR+R
Sbjct: 365 RQLSRDGRIR 374


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