BLASTX nr result

ID: Coptis24_contig00008121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008121
         (1567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510750.1| protein with unknown function [Ricinus commu...   358   3e-96
ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246...   357   5e-96
emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]   356   8e-96
ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|1...   348   3e-93
ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|2...   346   9e-93

>ref|XP_002510750.1| protein with unknown function [Ricinus communis]
            gi|223551451|gb|EEF52937.1| protein with unknown function
            [Ricinus communis]
          Length = 235

 Score =  358 bits (918), Expect = 3e-96
 Identities = 174/246 (70%), Positives = 197/246 (80%), Gaps = 4/246 (1%)
 Frame = +1

Query: 283  MVDPMMDADEDHLCPPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIH 462
            MV P        L PPWL+P+L+A+YF+PC FHGDS+KSECN+FCLDC+G ALCSYCLI+
Sbjct: 1    MVSPFGQMVHHDLGPPWLRPMLRASYFVPCSFHGDSNKSECNLFCLDCMGNALCSYCLIN 60

Query: 463  HKDHHIVQIRRSSYHNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNT 642
            HKDH IVQIRRSSYHNV+RVNEIQKYIDI+ VQTYIINSAKIVFLNERPQPRPGKGVTNT
Sbjct: 61   HKDHRIVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNT 120

Query: 643  CEICCRSLLDSFRFCSLGCKLGAMKRGDLSLTFILRQKHSRDAL----DSDDSSTPKKFP 810
            CEICCRSLLDSFRFCSLGCKLG MKRGD  LTF LR KH+RD      +SD+SSTPKK  
Sbjct: 121  CEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFTLRMKHNRDPFLGGSESDESSTPKKIR 180

Query: 811  KTSGFSRFFNMDDTRQVLSFSSDANNNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGI 990
            KT  F+R  +      +  +SSD +      SSGDE  +NISP+TPPI N+RN+RRRKGI
Sbjct: 181  KTHAFNRLMD-----GLSIYSSDGH------SSGDEATTNISPSTPPIYNHRNARRRKGI 229

Query: 991  PHRAPF 1008
            PHRAPF
Sbjct: 230  PHRAPF 235


>ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246080 [Vitis vinifera]
          Length = 247

 Score =  357 bits (916), Expect = 5e-96
 Identities = 175/248 (70%), Positives = 199/248 (80%), Gaps = 6/248 (2%)
 Frame = +1

Query: 283  MVDPMMDADEDHLCPPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIH 462
            MV  +     DHL PPWLKP+L+A+YF+PC  HGDS+KSECNMFCLDC+G ALCSYCLIH
Sbjct: 1    MVSSIGRMGNDHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIH 60

Query: 463  HKDHHIVQIRRSSYHNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNT 642
            HKDH +VQIRRSSYHNV+RVNEIQKYIDI+ VQTY+INSAKIVFLNERPQPRPGKGVTNT
Sbjct: 61   HKDHCVVQIRRSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNT 120

Query: 643  CEICCRSLLDSFRFCSLGCKLGAMKRGDLSLTFILRQKHSRDAL---DSDDSSTPKKFPK 813
            CEICCRSLLDSFRFCSLGCKLGAMKRGD  LTF L+ KH R+     +SD+SSTP+KF +
Sbjct: 121  CEICCRSLLDSFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQR 180

Query: 814  TSGFSRFFNMDDTRQVLSFSSDAN---NNNKYTSSGDEVGSNISPATPPIVNNRNSRRRK 984
            T  FSR   +D     L    DA    + +  +SSGDE  +NISPATPPI N+ N+RRRK
Sbjct: 181  THLFSRLM-IDGPTISLDGHHDATVAADKSTASSSGDETINNISPATPPIFNHSNARRRK 239

Query: 985  GIPHRAPF 1008
            GIPHRAPF
Sbjct: 240  GIPHRAPF 247


>emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]
          Length = 240

 Score =  356 bits (914), Expect = 8e-96
 Identities = 173/238 (72%), Positives = 196/238 (82%), Gaps = 6/238 (2%)
 Frame = +1

Query: 313  DHLCPPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIHHKDHHIVQIR 492
            DHL PPWLKP+L+A+YF+PC  HGDS+KSECNMFCLDC+G ALCSYCLIHHKDH +VQIR
Sbjct: 4    DHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIHHKDHCVVQIR 63

Query: 493  RSSYHNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD 672
            RSSYHNV+RVNEIQKYIDI+ VQTY+INSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD
Sbjct: 64   RSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLD 123

Query: 673  SFRFCSLGCKLGAMKRGDLSLTFILRQKHSRDAL---DSDDSSTPKKFPKTSGFSRFFNM 843
            SFRFCSLGCKLGAMKRGD  LTF L+ KH R+     +SD+SSTP+KF +T  FSR   +
Sbjct: 124  SFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQRTHLFSRLM-I 182

Query: 844  DDTRQVLSFSSDAN---NNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGIPHRAPF 1008
            D     L    DA    + +  +SSGDE  +NISPATPPI N+ N+RRRKGIPHRAPF
Sbjct: 183  DGPTISLDGHHDATVAADKSTASSSGDETINNISPATPPIFNHSNARRRKGIPHRAPF 240


>ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|118489570|gb|ABK96587.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222856458|gb|EEE94005.1| predicted protein [Populus
            trichocarpa]
          Length = 238

 Score =  348 bits (892), Expect = 3e-93
 Identities = 165/232 (71%), Positives = 189/232 (81%), Gaps = 4/232 (1%)
 Frame = +1

Query: 325  PPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIHHKDHHIVQIRRSSY 504
            PPWL P+L+A+YFIPC  HG+S+KSECNMFCLDC+G A CSYCLI+HKDH +VQIRRSSY
Sbjct: 15   PPWLIPMLRASYFIPCGVHGESNKSECNMFCLDCMGNAFCSYCLIYHKDHRVVQIRRSSY 74

Query: 505  HNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF 684
            HNV+RVNEIQKYIDI+ VQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF
Sbjct: 75   HNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRF 134

Query: 685  CSLGCKLGAMKRGDLSLTFILRQKHSRDAL----DSDDSSTPKKFPKTSGFSRFFNMDDT 852
            CSLGCKLG MKRGD  LTF ++ KH+RD      +SD+SSTPKK  +T  F+R       
Sbjct: 135  CSLGCKLGGMKRGDPDLTFAVKLKHNRDPFFGGSESDESSTPKKIRRTHAFNRLME---- 190

Query: 853  RQVLSFSSDANNNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGIPHRAPF 1008
                  S  ++NN+   SSGD+  +NISPATPPI N+RN+RRRKGIPHRAPF
Sbjct: 191  ----GLSIYSSNNDGAESSGDDAATNISPATPPIFNHRNARRRKGIPHRAPF 238


>ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|222843616|gb|EEE81163.1|
            predicted protein [Populus trichocarpa]
          Length = 238

 Score =  346 bits (888), Expect = 9e-93
 Identities = 166/246 (67%), Positives = 192/246 (78%), Gaps = 4/246 (1%)
 Frame = +1

Query: 283  MVDPMMDADEDHLCPPWLKPLLKANYFIPCEFHGDSHKSECNMFCLDCLGTALCSYCLIH 462
            MV P          PPWL P+L+A+YFIPC  HG+S+KSECNMFCLDC+G A CSYCLI+
Sbjct: 1    MVSPFGQMRNHDTGPPWLIPMLRASYFIPCAVHGESNKSECNMFCLDCMGNAFCSYCLIY 60

Query: 463  HKDHHIVQIRRSSYHNVIRVNEIQKYIDIAAVQTYIINSAKIVFLNERPQPRPGKGVTNT 642
            H+DH +VQIRRSSYHNV+RVNEIQKYIDI+ VQTYIINSAKIVFLNERPQPRPGKGVTNT
Sbjct: 61   HRDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNT 120

Query: 643  CEICCRSLLDSFRFCSLGCKLGAMKRGDLSLTFILRQKHSRDAL----DSDDSSTPKKFP 810
            CEICCRSLLDSFRFCSLGCKLG MKRGD  LTF L+ K +RD      +SD+SSTPKK  
Sbjct: 121  CEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFALKLKQNRDPFFGGSESDESSTPKKIR 180

Query: 811  KTSGFSRFFNMDDTRQVLSFSSDANNNNKYTSSGDEVGSNISPATPPIVNNRNSRRRKGI 990
            +T  F+R  +          S  ++NN+   SSGD+  +NISPATPP+ N+RN+RRRKGI
Sbjct: 181  RTHAFNRLMD--------GLSIYSSNNDGAESSGDDAATNISPATPPLFNHRNARRRKGI 232

Query: 991  PHRAPF 1008
            PHRAPF
Sbjct: 233  PHRAPF 238


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