BLASTX nr result

ID: Coptis24_contig00008120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008120
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_09484871.1| RHS repeat-associated core domain-containing ...    66   3e-09
ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003632172.1| PREDICTED: leucine-rich repeat receptor-like...    64   2e-08
emb|CBI16549.3| unnamed protein product [Vitis vinifera]               64   2e-08
emb|CBI16548.3| unnamed protein product [Vitis vinifera]               61   1e-07

>ref|ZP_09484871.1| RHS repeat-associated core domain-containing protein, partial
           [Anaerophaga sp. HS1]
          Length = 362

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   DFAKVLTNLSNLEFLDLSFNNLDDF--PDLRNMSNLKILNVSQNDFLGRIPPXXXXXXXX 174
           ++   LTNLS L  LDLSFN++      D+  ++NL  LN+  N+F G +PP        
Sbjct: 122 EWCNELTNLSELRILDLSFNDISGSLSSDIEKLTNLDTLNLYSNNFSGNLPPEIGSLTNL 181

Query: 175 XXXXXRYTNIKEDYISNLRNLSMLKILDLSGNNFSGRIP 291
                 Y N   +   ++ NLS L  L LS N FSG IP
Sbjct: 182 TFLALDYNNFSGELPGSIGNLSQLNYLYLSSNKFSGEIP 220


>ref|XP_002333149.1| predicted protein [Populus trichocarpa] gi|222834987|gb|EEE73436.1|
           predicted protein [Populus trichocarpa]
          Length = 1014

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = +1

Query: 13  VLTNLSNLEFLDLSFNNL--DDFPDLRNMSNLKILNVSQNDFLGRIPPXXXXXXXXXXXX 186
           +++NL +LE++ L   N+   D P L N++ L IL++S N+F G+IPP            
Sbjct: 381 LISNLKSLEYMSLRNCNIIRSDLPLLGNLTQLIILDLSSNNFSGQIPPSLSNLTQLIYLV 440

Query: 187 XRYTNIKEDYISNLRNLSMLKILDLSGNNFSGRIP 291
               N       +LRNL+ L  LDLS NNF+G+IP
Sbjct: 441 LSSNNFSGQIPQSLRNLTQLTFLDLSSNNFNGQIP 475


>ref|XP_003632172.1| PREDICTED: leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g17230-like [Vitis
           vinifera]
          Length = 290

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +1

Query: 22  NLSNLEFLDLSFNNLD-DFPDL--RNMSNLKILNVSQNDFLGRIPPXXXXXXXXXXXXXR 192
           ++ +LE+L +S NN+  + P +   N+SNL  L++S N+F G +PP              
Sbjct: 106 HIRSLEWLYISDNNMQGEIPAVGFANLSNLVDLDLSWNNFSGSVPPQLFHLPLLQHLSLD 165

Query: 193 YTNIKEDYISNLRNLSMLKILDLSGNNFSGRIPP 294
           Y ++  +    +RNLS L++L LSGNNFSG IPP
Sbjct: 166 YNSLSGEVPEEIRNLSKLQVLSLSGNNFSGSIPP 199



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +1

Query: 16  LTNLSNLEFLDLSFNNLD-DFPD-LRNMSNLKILNVSQNDFLGRIPPXXXXXXXXXXXXX 189
           L +L  L+ L L +N+L  + P+ +RN+S L++L++S N+F G IPP             
Sbjct: 153 LFHLPLLQHLSLDYNSLSGEVPEEIRNLSKLQVLSLSGNNFSGSIPPQLFQLPLLQDLSL 212

Query: 190 RYTNIKEDYISNLRNLSMLKILDLSGNNFSGRIPP 294
            Y ++       + NLS L+ L LSGNNFSG IPP
Sbjct: 213 HYNSLSGKVPKEIGNLSKLQRLSLSGNNFSGSIPP 247


>emb|CBI16549.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +1

Query: 22  NLSNLEFLDLSFNNLD-DFPDL--RNMSNLKILNVSQNDFLGRIPPXXXXXXXXXXXXXR 192
           ++ +LE+L +S NN+  + P +   N+SNL  L++S N+F G +PP              
Sbjct: 134 HIRSLEWLYISDNNMQGEIPAVGFANLSNLVDLDLSWNNFSGSVPPQLFHLPLLQHLSLD 193

Query: 193 YTNIKEDYISNLRNLSMLKILDLSGNNFSGRIPP 294
           Y ++  +    +RNLS L++L LSGNNFSG IPP
Sbjct: 194 YNSLSGEVPEEIRNLSKLQVLSLSGNNFSGSIPP 227



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = +1

Query: 16  LTNLSNLEFLDLSFNNLDDF--PDLRNMSNLKILNVSQNDFLGRIPPXXXXXXXXXXXXX 189
           L  L  L+ L L +N+L      ++RN+S L++L++S N+F G IPP             
Sbjct: 304 LFQLPLLQDLSLDYNSLSGKVPEEIRNLSKLQVLSLSGNNFSGSIPPQLFQLPLLQDLSL 363

Query: 190 RYTNIKEDYISNLRNLSMLKILDLSGNNFSGRIPP 294
            Y ++       + NLS L+ L LSGNNFSG IPP
Sbjct: 364 DYNSLSGKVPKEIGNLSKLQRLSLSGNNFSGSIPP 398


>emb|CBI16548.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
 Frame = +1

Query: 10  KVLTNLSNLEFLDLSFNNLDD-FPDL--RNMSNLKILNVSQNDFLGRIPPXXXXXXXXXX 180
           + LT L  L  LD+S N L    PD+   N+SNL  L++S N+F G IPP          
Sbjct: 161 QTLTKLQQLTILDVSNNQLTGRIPDVGFANLSNLVDLDLSWNNFSGSIPPQLFHLPLLQD 220

Query: 181 XXXRYTNIKEDYISNLRNLSMLKILDLSGNNFSGRIPP 294
                 ++       + NLS L++L LSGNNFSG IPP
Sbjct: 221 LSLDGNSLSGKIPEEIGNLSRLQVLSLSGNNFSGSIPP 258


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