BLASTX nr result

ID: Coptis24_contig00008114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008114
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36353.3| unnamed protein product [Vitis vinifera]              334   1e-89
ref|XP_002263600.1| PREDICTED: uncharacterized protein LOC100266...   334   1e-89
ref|XP_002329047.1| predicted protein [Populus trichocarpa] gi|2...   316   5e-84
ref|XP_002517669.1| conserved hypothetical protein [Ricinus comm...   315   1e-83
ref|XP_004135852.1| PREDICTED: uncharacterized protein LOC101207...   306   4e-81

>emb|CBI36353.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  334 bits (857), Expect = 1e-89
 Identities = 169/231 (73%), Positives = 194/231 (83%), Gaps = 2/231 (0%)
 Frame = -3

Query: 908 SVSISGQ--GQGDVTTGYNRLQVKLAKKLTPNSQQPTPFLTFESKGYKSAVIQDVPISKP 735
           SVSI  +  G  DV TG NRLQ+KL KKL PNS QP PFLTFESKGYKSAVIQDVPISKP
Sbjct: 92  SVSIYAEMGGGDDVGTGSNRLQIKLVKKLPPNSHQPLPFLTFESKGYKSAVIQDVPISKP 151

Query: 734 LSRADVMELQSALDMAQDLPQTLVQGPDLLQLQSFVDRLKHVGDLLNITVTQYGDLHLQL 555
           LSRADV+ELQSALDMAQDLP+TLVQ PDL QLQ++VDR+KHVGDLLNI++++YGDLH+Q+
Sbjct: 152 LSRADVLELQSALDMAQDLPRTLVQVPDLNQLQNYVDRMKHVGDLLNISISKYGDLHVQI 211

Query: 554 TNTLVTLGAEFRKLXXXXXXXXXXXGNENMSAQSRTKSAIERGEALSVQVSMKHFGKSLQ 375
           + TL+TLGAEFRKL            + ++SAQSRT+ A++RG+A +VQVSMKHF KSLQ
Sbjct: 212 STTLITLGAEFRKLLVVGEQEEVPAEDRDLSAQSRTQRAVQRGDAQTVQVSMKHFAKSLQ 271

Query: 374 CHLAKPDCAFYGITPLASSLTVIFQFFIPGTRQTDKSISLHCRLPVLDPGS 222
           CHLAKPDCAFYGI    + LTVIFQFFIPG+RQ DKSISLHCRLPVLDPGS
Sbjct: 272 CHLAKPDCAFYGIAQEGACLTVIFQFFIPGSRQNDKSISLHCRLPVLDPGS 322


>ref|XP_002263600.1| PREDICTED: uncharacterized protein LOC100266426 [Vitis vinifera]
           gi|147865235|emb|CAN81953.1| hypothetical protein
           VITISV_014018 [Vitis vinifera]
          Length = 323

 Score =  334 bits (857), Expect = 1e-89
 Identities = 169/231 (73%), Positives = 194/231 (83%), Gaps = 2/231 (0%)
 Frame = -3

Query: 908 SVSISGQ--GQGDVTTGYNRLQVKLAKKLTPNSQQPTPFLTFESKGYKSAVIQDVPISKP 735
           SVSI  +  G  DV TG NRLQ+KL KKL PNS QP PFLTFESKGYKSAVIQDVPISKP
Sbjct: 92  SVSIYAEMGGGDDVGTGSNRLQIKLVKKLPPNSHQPLPFLTFESKGYKSAVIQDVPISKP 151

Query: 734 LSRADVMELQSALDMAQDLPQTLVQGPDLLQLQSFVDRLKHVGDLLNITVTQYGDLHLQL 555
           LSRADV+ELQSALDMAQDLP+TLVQ PDL QLQ++VDR+KHVGDLLNI++++YGDLH+Q+
Sbjct: 152 LSRADVLELQSALDMAQDLPRTLVQVPDLNQLQNYVDRMKHVGDLLNISISKYGDLHVQI 211

Query: 554 TNTLVTLGAEFRKLXXXXXXXXXXXGNENMSAQSRTKSAIERGEALSVQVSMKHFGKSLQ 375
           + TL+TLGAEFRKL            + ++SAQSRT+ A++RG+A +VQVSMKHF KSLQ
Sbjct: 212 STTLITLGAEFRKLLVVGEQEEVPAEDRDLSAQSRTQRAVQRGDAQTVQVSMKHFAKSLQ 271

Query: 374 CHLAKPDCAFYGITPLASSLTVIFQFFIPGTRQTDKSISLHCRLPVLDPGS 222
           CHLAKPDCAFYGI    + LTVIFQFFIPG+RQ DKSISLHCRLPVLDPGS
Sbjct: 272 CHLAKPDCAFYGIAQEGACLTVIFQFFIPGSRQNDKSISLHCRLPVLDPGS 322


>ref|XP_002329047.1| predicted protein [Populus trichocarpa] gi|222839718|gb|EEE78041.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  316 bits (809), Expect = 5e-84
 Identities = 160/229 (69%), Positives = 187/229 (81%)
 Frame = -3

Query: 908 SVSISGQGQGDVTTGYNRLQVKLAKKLTPNSQQPTPFLTFESKGYKSAVIQDVPISKPLS 729
           SVSI     G    G NRLQVKL KKL PNS QP PFLTFE+KGYKSAVIQDVPISKPLS
Sbjct: 93  SVSIVSSESG----GANRLQVKLVKKLPPNSTQPMPFLTFETKGYKSAVIQDVPISKPLS 148

Query: 728 RADVMELQSALDMAQDLPQTLVQGPDLLQLQSFVDRLKHVGDLLNITVTQYGDLHLQLTN 549
           R  +++LQ+ALD AQDLP+TLVQ PDL +LQ+FVDR+KHVGDLLN+++++YGDLHLQ++ 
Sbjct: 149 RDQLLQLQAALDAAQDLPRTLVQVPDLNRLQNFVDRMKHVGDLLNVSISKYGDLHLQIST 208

Query: 548 TLVTLGAEFRKLXXXXXXXXXXXGNENMSAQSRTKSAIERGEALSVQVSMKHFGKSLQCH 369
           TL+TLGAEFRKL            + ++SAQ+R++ AI  G+A SVQVS++HF KSLQCH
Sbjct: 209 TLITLGAEFRKLLVVGDKAQAPDEDRDLSAQTRSERAILMGDAQSVQVSVRHFSKSLQCH 268

Query: 368 LAKPDCAFYGITPLASSLTVIFQFFIPGTRQTDKSISLHCRLPVLDPGS 222
           LAKPDCAFYGI P  + LTVIFQFFIPGTRQTDKSISLHCRLPVLDPGS
Sbjct: 269 LAKPDCAFYGIAPQGACLTVIFQFFIPGTRQTDKSISLHCRLPVLDPGS 317


>ref|XP_002517669.1| conserved hypothetical protein [Ricinus communis]
           gi|223543301|gb|EEF44833.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 320

 Score =  315 bits (806), Expect = 1e-83
 Identities = 158/230 (68%), Positives = 187/230 (81%), Gaps = 1/230 (0%)
 Frame = -3

Query: 908 SVSISGQ-GQGDVTTGYNRLQVKLAKKLTPNSQQPTPFLTFESKGYKSAVIQDVPISKPL 732
           SVSI  + G G +    NRLQ+KL KKL PN  QP PFLTFE+KGYKSAVIQDVPISKPL
Sbjct: 92  SVSICNEFGAGGLAA--NRLQIKLVKKLPPNCTQPMPFLTFETKGYKSAVIQDVPISKPL 149

Query: 731 SRADVMELQSALDMAQDLPQTLVQGPDLLQLQSFVDRLKHVGDLLNITVTQYGDLHLQLT 552
           SRA V+ELQ ALD AQDLPQTLVQ PD  QLQ++VDR+KH+GDLLN+++++YGDLH+Q++
Sbjct: 150 SRAQVLELQMALDNAQDLPQTLVQVPDFNQLQNYVDRMKHIGDLLNVSISKYGDLHMQIS 209

Query: 551 NTLVTLGAEFRKLXXXXXXXXXXXGNENMSAQSRTKSAIERGEALSVQVSMKHFGKSLQC 372
            TL+TLGAEFRKL            ++N+SAQ+R++ A+ RG+A SVQVS++HF KSLQC
Sbjct: 210 TTLITLGAEFRKLLVIGDKAQAPAEDQNVSAQTRSERAVSRGDAQSVQVSVRHFSKSLQC 269

Query: 371 HLAKPDCAFYGITPLASSLTVIFQFFIPGTRQTDKSISLHCRLPVLDPGS 222
           HLAKPDCAFYGI    + LTVIFQFFIPGTRQ DKSISLHCRLPVLDPGS
Sbjct: 270 HLAKPDCAFYGIVAQGACLTVIFQFFIPGTRQMDKSISLHCRLPVLDPGS 319


>ref|XP_004135852.1| PREDICTED: uncharacterized protein LOC101207808 [Cucumis sativus]
           gi|449491049|ref|XP_004158784.1| PREDICTED:
           uncharacterized LOC101207808 [Cucumis sativus]
          Length = 319

 Score =  306 bits (784), Expect = 4e-81
 Identities = 157/230 (68%), Positives = 186/230 (80%), Gaps = 1/230 (0%)
 Frame = -3

Query: 908 SVSISGQ-GQGDVTTGYNRLQVKLAKKLTPNSQQPTPFLTFESKGYKSAVIQDVPISKPL 732
           SVSI  + G G      NRLQ+KL KKL  N  QP PFLTFE+KGYKSAVIQDVPISKP+
Sbjct: 92  SVSICSEFGNGPTA---NRLQIKLVKKLPLNCTQPMPFLTFETKGYKSAVIQDVPISKPM 148

Query: 731 SRADVMELQSALDMAQDLPQTLVQGPDLLQLQSFVDRLKHVGDLLNITVTQYGDLHLQLT 552
           SRA V+ELQ+ALDMAQDLPQTLVQ PDL QLQ+FVDR+K+VGDLLN+++++YGDLH+Q++
Sbjct: 149 SRAQVLELQTALDMAQDLPQTLVQVPDLNQLQNFVDRMKNVGDLLNVSISKYGDLHVQIS 208

Query: 551 NTLVTLGAEFRKLXXXXXXXXXXXGNENMSAQSRTKSAIERGEALSVQVSMKHFGKSLQC 372
             L+TLGAE+RKL            ++N+SAQ+R+  AI RG+A SVQVS+KHF KSLQ 
Sbjct: 209 TGLITLGAEYRKLFVIGEQARAPAEDQNLSAQTRSTRAILRGDAQSVQVSVKHFAKSLQY 268

Query: 371 HLAKPDCAFYGITPLASSLTVIFQFFIPGTRQTDKSISLHCRLPVLDPGS 222
           HLAKPDC FYGI P  + LTVIFQFFIPG+RQTDKSISLHCRLPVLDPG+
Sbjct: 269 HLAKPDCTFYGIAPQGACLTVIFQFFIPGSRQTDKSISLHCRLPVLDPGT 318


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