BLASTX nr result

ID: Coptis24_contig00008099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008099
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852...   197   3e-48
emb|CBI39364.3| unnamed protein product [Vitis vinifera]              196   5e-48
ref|XP_002307920.1| predicted protein [Populus trichocarpa] gi|2...   192   7e-47
ref|XP_003556852.1| PREDICTED: uncharacterized protein LOC100791...   190   3e-46
ref|XP_004174001.1| PREDICTED: UPF0586 protein C9orf41-like, par...   186   5e-45

>ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852521 [Vitis vinifera]
          Length = 611

 Score =  197 bits (500), Expect = 3e-48
 Identities = 93/110 (84%), Positives = 97/110 (88%)
 Frame = -2

Query: 487 RVNLDPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCYTPILEELDRLF 308
           +V+    +WLDP FQL VPLVDVDKVRCIIRNIVRDWA+EG KERDQCY PILEELD LF
Sbjct: 328 KVSSSTHEWLDPSFQLNVPLVDVDKVRCIIRNIVRDWAAEGQKERDQCYKPILEELDGLF 387

Query: 307 PNRSKDSPPCCLVPGAGLGRLTLEISCLGFISQGNEFSYYMMICSMFILN 158
           PNRSKD PP CLVPGAGLGRL LEISCLGFISQGNEFSYYMMICS FILN
Sbjct: 388 PNRSKDRPPSCLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILN 437



 Score = 53.1 bits (126), Expect(2) = 6e-11
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 763 SGELGYSDAAEEDVKRYERSYRKLPPAHKTILS 665
           S  L Y DAAE+DV+RYERS+R+LPPAHK +LS
Sbjct: 34  SAYLNYPDAAEDDVRRYERSFRRLPPAHKALLS 66



 Score = 40.0 bits (92), Expect(2) = 6e-11
 Identities = 22/42 (52%), Positives = 26/42 (61%)
 Frame = -1

Query: 674 YPFKCQQLRRCISGNSFFIQNMLEESGML*TIRQDLVLSLNP 549
           YP K Q+LRRCIS NSFFI NML+       + QD  +  NP
Sbjct: 68  YPSKFQRLRRCISVNSFFIFNMLQAFEPPLDMSQDTDMCENP 109


>emb|CBI39364.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  196 bits (498), Expect = 5e-48
 Identities = 93/109 (85%), Positives = 96/109 (88%)
 Frame = -2

Query: 484 VNLDPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCYTPILEELDRLFP 305
           V+    +WLDP FQL VPLVDVDKVRCIIRNIVRDWA+EG KERDQCY PILEELD LFP
Sbjct: 216 VSSSTHEWLDPSFQLNVPLVDVDKVRCIIRNIVRDWAAEGQKERDQCYKPILEELDGLFP 275

Query: 304 NRSKDSPPCCLVPGAGLGRLTLEISCLGFISQGNEFSYYMMICSMFILN 158
           NRSKD PP CLVPGAGLGRL LEISCLGFISQGNEFSYYMMICS FILN
Sbjct: 276 NRSKDRPPSCLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILN 324



 Score = 53.1 bits (126), Expect(2) = 6e-11
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 763 SGELGYSDAAEEDVKRYERSYRKLPPAHKTILS 665
           S  L Y DAAE+DV+RYERS+R+LPPAHK +LS
Sbjct: 34  SAYLNYPDAAEDDVRRYERSFRRLPPAHKALLS 66



 Score = 40.0 bits (92), Expect(2) = 6e-11
 Identities = 22/42 (52%), Positives = 26/42 (61%)
 Frame = -1

Query: 674 YPFKCQQLRRCISGNSFFIQNMLEESGML*TIRQDLVLSLNP 549
           YP K Q+LRRCIS NSFFI NML+       + QD  +  NP
Sbjct: 68  YPSKFQRLRRCISVNSFFIFNMLQAFEPPLDMSQDTDMCENP 109


>ref|XP_002307920.1| predicted protein [Populus trichocarpa] gi|222853896|gb|EEE91443.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  192 bits (487), Expect(2) = 7e-47
 Identities = 90/114 (78%), Positives = 99/114 (86%)
 Frame = -2

Query: 490 LRVNLDPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCYTPILEELDRL 311
           ++V     DWLDP  QL+VP+VDVDKVRCIIRNIVRDWA+EG KERDQCY PILEEL+ L
Sbjct: 1   IQVPSSHHDWLDPSLQLRVPMVDVDKVRCIIRNIVRDWAAEGQKERDQCYKPILEELNSL 60

Query: 310 FPNRSKDSPPCCLVPGAGLGRLTLEISCLGFISQGNEFSYYMMICSMFILNQ*E 149
           FP+RS +SPP CLVPGAGLGRL LEISCLGF+SQGNEFSYYMMICS FILNQ E
Sbjct: 61  FPDRSNESPPTCLVPGAGLGRLALEISCLGFVSQGNEFSYYMMICSSFILNQTE 114



 Score = 21.9 bits (45), Expect(2) = 7e-47
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 29  TETVGEWTV 3
           TET GEWT+
Sbjct: 113 TETAGEWTI 121


>ref|XP_003556852.1| PREDICTED: uncharacterized protein LOC100791662 [Glycine max]
          Length = 627

 Score =  190 bits (482), Expect = 3e-46
 Identities = 89/109 (81%), Positives = 95/109 (87%)
 Frame = -2

Query: 484 VNLDPRDWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCYTPILEELDRLFP 305
           V    + WLDP  +L VPLVDVDKVRCIIRNIVRDWA+EG  ERDQCY+PIL+EL+ LFP
Sbjct: 340 VTSSQQQWLDPSLKLNVPLVDVDKVRCIIRNIVRDWAAEGKNERDQCYSPILDELNMLFP 399

Query: 304 NRSKDSPPCCLVPGAGLGRLTLEISCLGFISQGNEFSYYMMICSMFILN 158
           NRSKDSPP CLVPGAGLGRL LEISCLGFISQGNEFSYYMMICS FILN
Sbjct: 400 NRSKDSPPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILN 448



 Score = 55.8 bits (133), Expect(2) = 5e-08
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = -2

Query: 763 SGELGYSDAAEEDVKRYERSYRKLPPAHKTILS 665
           S  L Y DAAEEDV+RYERSYRKLPP+HK +LS
Sbjct: 168 SAYLNYPDAAEEDVRRYERSYRKLPPSHKALLS 200



 Score = 27.3 bits (59), Expect(2) = 5e-08
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -1

Query: 674 YPFKCQQLRRCISGNSFFIQNMLEESGML*TIRQDLVLSLNP 549
           Y  K Q+LR CIS N+ FI  ML+       + QD+  S +P
Sbjct: 202 YSRKFQRLRWCISMNTHFIFGMLQAFEPPLDMSQDVDFSEDP 243


>ref|XP_004174001.1| PREDICTED: UPF0586 protein C9orf41-like, partial [Cucumis sativus]
          Length = 179

 Score =  186 bits (472), Expect = 5e-45
 Identities = 87/103 (84%), Positives = 91/103 (88%)
 Frame = -2

Query: 466 DWLDPKFQLKVPLVDVDKVRCIIRNIVRDWASEGGKERDQCYTPILEELDRLFPNRSKDS 287
           +WLDP  QL VPLVDVDKVRCIIRNIVRDWA EG KER+QCY PILEEL  LFP+R K+S
Sbjct: 39  EWLDPSLQLNVPLVDVDKVRCIIRNIVRDWAEEGQKEREQCYKPILEELHSLFPDRKKES 98

Query: 286 PPCCLVPGAGLGRLTLEISCLGFISQGNEFSYYMMICSMFILN 158
           PP CLVPGAGLGRL LEISCLGFISQGNEFSYYMMICS FILN
Sbjct: 99  PPACLVPGAGLGRLALEISCLGFISQGNEFSYYMMICSSFILN 141


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