BLASTX nr result

ID: Coptis24_contig00008094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008094
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_002522118.1| conserved hypothetical protein [Ricinus comm...   179   2e-43
ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like ...   176   1e-42
emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera]   176   1e-42
ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatu...   174   5e-42

>ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|222850329|gb|EEE87876.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  185 bits (469), Expect = 4e-45
 Identities = 85/124 (68%), Positives = 100/124 (80%)
 Frame = -1

Query: 374 QYWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIV 195
           +YWLLKTEPGEWSW+DQ +N GISNWDGVKNKQAQK +K+MKL DLCFFYHSGS +RR+V
Sbjct: 6   RYWLLKTEPGEWSWDDQASNGGISNWDGVKNKQAQKNLKAMKLNDLCFFYHSGSNARRVV 65

Query: 194 GVVSVTKEWYSDKHEGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVSNK 15
           GVV+V +EWY +  EG VDVKAVG MRRP+D           GF +F+QPRLSVVPVS +
Sbjct: 66  GVVTVVREWYDEGGEGVVDVKAVGEMRRPLDLKELKGDEGLKGFQLFRQPRLSVVPVSKE 125

Query: 14  VWDR 3
           VW+R
Sbjct: 126 VWER 129


>ref|XP_002522118.1| conserved hypothetical protein [Ricinus communis]
           gi|223538717|gb|EEF40318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 150

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/125 (67%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = -1

Query: 374 QYWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIV 195
           QYWLLKTEPGEWSW+DQ +N GI+NWDGVKNKQAQK +K+M + DLCFFYHSG+K+RR+V
Sbjct: 6   QYWLLKTEPGEWSWDDQASNGGITNWDGVKNKQAQKNLKAMNIKDLCFFYHSGAKARRVV 65

Query: 194 GVVSVTKEWYS-DKHEGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVSN 18
           GVV+V KEWYS D  E  VDVKAVG MRRPVD            F +F+QPRLSVVPV  
Sbjct: 66  GVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKNDDGLSDFALFRQPRLSVVPVPK 125

Query: 17  KVWDR 3
           +VW+R
Sbjct: 126 EVWER 130


>ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like [Vitis vinifera]
          Length = 158

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/126 (67%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
 Frame = -1

Query: 371 YWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIVG 192
           YWLLKTEPGEWSWEDQ ANEG+SNWDGVKNKQAQK +K+M LGDLCFFYHSG+K+RR+VG
Sbjct: 7   YWLLKTEPGEWSWEDQAANEGLSNWDGVKNKQAQKNLKAMHLGDLCFFYHSGAKARRVVG 66

Query: 191 VVSVTKEWYSDKH---EGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVS 21
           VVSV +EWY +      GAVDV+ VG MRR VD           GF +F+QPRLSVVPV 
Sbjct: 67  VVSVVREWYEEGDGGAGGAVDVRCVGEMRRAVDLGEMKKESGLKGFGLFRQPRLSVVPVP 126

Query: 20  NKVWDR 3
            +VW R
Sbjct: 127 EEVWKR 132


>emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera]
          Length = 1471

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/126 (67%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
 Frame = -1

Query: 371 YWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIVG 192
           YWLLKTEPGEWSWEDQ ANEG+SNWDGVKNKQAQK +K+M LGDLCFFYHSG+K+RR+VG
Sbjct: 7   YWLLKTEPGEWSWEDQAANEGLSNWDGVKNKQAQKNLKAMHLGDLCFFYHSGAKARRVVG 66

Query: 191 VVSVTKEWYSDKH---EGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVS 21
           VVSV +EWY +      GAVDV+ VG MRR VD           GF +F+QPRLSVVPV 
Sbjct: 67  VVSVVREWYEEGDGGAGGAVDVRCVGEMRRAVDLGEMKKESGLKGFGLFRQPRLSVVPVP 126

Query: 20  NKVWDR 3
            +VW R
Sbjct: 127 EEVWKR 132


>ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatula]
           gi|355511977|gb|AES93600.1| Thymocyte nuclear protein
           [Medicago truncatula]
          Length = 146

 Score =  174 bits (442), Expect = 5e-42
 Identities = 88/122 (72%), Positives = 95/122 (77%), Gaps = 1/122 (0%)
 Frame = -1

Query: 368 WLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIVGV 189
           +LLKTEP EWSWEDQEAN GIS WDGVKNKQAQKY+KSM L DLCFFYHSG KSRRIVGV
Sbjct: 8   FLLKTEPSEWSWEDQEANGGISKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPKSRRIVGV 67

Query: 188 VSVTKEWYSDK-HEGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVSNKV 12
           VSV KEWY+D   +GAVDVKAVG MRR VD            FV+ KQPRLSVVPV + +
Sbjct: 68  VSVVKEWYTDNDDDGAVDVKAVGEMRRVVD---LKEMKHLKDFVLLKQPRLSVVPVPHVI 124

Query: 11  WD 6
           WD
Sbjct: 125 WD 126


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