BLASTX nr result
ID: Coptis24_contig00008094
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008094 (437 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|2... 185 4e-45 ref|XP_002522118.1| conserved hypothetical protein [Ricinus comm... 179 2e-43 ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like ... 176 1e-42 emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera] 176 1e-42 ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatu... 174 5e-42 >ref|XP_002313921.1| predicted protein [Populus trichocarpa] gi|222850329|gb|EEE87876.1| predicted protein [Populus trichocarpa] Length = 151 Score = 185 bits (469), Expect = 4e-45 Identities = 85/124 (68%), Positives = 100/124 (80%) Frame = -1 Query: 374 QYWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIV 195 +YWLLKTEPGEWSW+DQ +N GISNWDGVKNKQAQK +K+MKL DLCFFYHSGS +RR+V Sbjct: 6 RYWLLKTEPGEWSWDDQASNGGISNWDGVKNKQAQKNLKAMKLNDLCFFYHSGSNARRVV 65 Query: 194 GVVSVTKEWYSDKHEGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVSNK 15 GVV+V +EWY + EG VDVKAVG MRRP+D GF +F+QPRLSVVPVS + Sbjct: 66 GVVTVVREWYDEGGEGVVDVKAVGEMRRPLDLKELKGDEGLKGFQLFRQPRLSVVPVSKE 125 Query: 14 VWDR 3 VW+R Sbjct: 126 VWER 129 >ref|XP_002522118.1| conserved hypothetical protein [Ricinus communis] gi|223538717|gb|EEF40318.1| conserved hypothetical protein [Ricinus communis] Length = 150 Score = 179 bits (455), Expect = 2e-43 Identities = 84/125 (67%), Positives = 98/125 (78%), Gaps = 1/125 (0%) Frame = -1 Query: 374 QYWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIV 195 QYWLLKTEPGEWSW+DQ +N GI+NWDGVKNKQAQK +K+M + DLCFFYHSG+K+RR+V Sbjct: 6 QYWLLKTEPGEWSWDDQASNGGITNWDGVKNKQAQKNLKAMNIKDLCFFYHSGAKARRVV 65 Query: 194 GVVSVTKEWYS-DKHEGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVSN 18 GVV+V KEWYS D E VDVKAVG MRRPVD F +F+QPRLSVVPV Sbjct: 66 GVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKNDDGLSDFALFRQPRLSVVPVPK 125 Query: 17 KVWDR 3 +VW+R Sbjct: 126 EVWER 130 >ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like [Vitis vinifera] Length = 158 Score = 176 bits (447), Expect = 1e-42 Identities = 85/126 (67%), Positives = 97/126 (76%), Gaps = 3/126 (2%) Frame = -1 Query: 371 YWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIVG 192 YWLLKTEPGEWSWEDQ ANEG+SNWDGVKNKQAQK +K+M LGDLCFFYHSG+K+RR+VG Sbjct: 7 YWLLKTEPGEWSWEDQAANEGLSNWDGVKNKQAQKNLKAMHLGDLCFFYHSGAKARRVVG 66 Query: 191 VVSVTKEWYSDKH---EGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVS 21 VVSV +EWY + GAVDV+ VG MRR VD GF +F+QPRLSVVPV Sbjct: 67 VVSVVREWYEEGDGGAGGAVDVRCVGEMRRAVDLGEMKKESGLKGFGLFRQPRLSVVPVP 126 Query: 20 NKVWDR 3 +VW R Sbjct: 127 EEVWKR 132 >emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera] Length = 1471 Score = 176 bits (447), Expect = 1e-42 Identities = 85/126 (67%), Positives = 97/126 (76%), Gaps = 3/126 (2%) Frame = -1 Query: 371 YWLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIVG 192 YWLLKTEPGEWSWEDQ ANEG+SNWDGVKNKQAQK +K+M LGDLCFFYHSG+K+RR+VG Sbjct: 7 YWLLKTEPGEWSWEDQAANEGLSNWDGVKNKQAQKNLKAMHLGDLCFFYHSGAKARRVVG 66 Query: 191 VVSVTKEWYSDKH---EGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVS 21 VVSV +EWY + GAVDV+ VG MRR VD GF +F+QPRLSVVPV Sbjct: 67 VVSVVREWYEEGDGGAGGAVDVRCVGEMRRAVDLGEMKKESGLKGFGLFRQPRLSVVPVP 126 Query: 20 NKVWDR 3 +VW R Sbjct: 127 EEVWKR 132 >ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatula] gi|355511977|gb|AES93600.1| Thymocyte nuclear protein [Medicago truncatula] Length = 146 Score = 174 bits (442), Expect = 5e-42 Identities = 88/122 (72%), Positives = 95/122 (77%), Gaps = 1/122 (0%) Frame = -1 Query: 368 WLLKTEPGEWSWEDQEANEGISNWDGVKNKQAQKYMKSMKLGDLCFFYHSGSKSRRIVGV 189 +LLKTEP EWSWEDQEAN GIS WDGVKNKQAQKY+KSM L DLCFFYHSG KSRRIVGV Sbjct: 8 FLLKTEPSEWSWEDQEANGGISKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPKSRRIVGV 67 Query: 188 VSVTKEWYSDK-HEGAVDVKAVGVMRRPVDXXXXXXXXXXXGFVMFKQPRLSVVPVSNKV 12 VSV KEWY+D +GAVDVKAVG MRR VD FV+ KQPRLSVVPV + + Sbjct: 68 VSVVKEWYTDNDDDGAVDVKAVGEMRRVVD---LKEMKHLKDFVLLKQPRLSVVPVPHVI 124 Query: 11 WD 6 WD Sbjct: 125 WD 126