BLASTX nr result

ID: Coptis24_contig00008080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008080
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527067.1| Phytoene synthase, chloroplast precursor, pu...   147   2e-33
ref|XP_002304008.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002297643.1| predicted protein [Populus trichocarpa] gi|2...   144   8e-33
emb|CBI16500.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002283501.1| PREDICTED: phytoene synthase 2, chloroplasti...   144   1e-32

>ref|XP_002527067.1| Phytoene synthase, chloroplast precursor, putative [Ricinus
           communis] gi|223533572|gb|EEF35311.1| Phytoene synthase,
           chloroplast precursor, putative [Ricinus communis]
          Length = 385

 Score =  147 bits (370), Expect = 2e-33
 Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178
           A+ GRVYLPQDELAQFGL ++D+F  KVTD W+EF+K QI RAR+Y++LAEEGA QLD  
Sbjct: 266 AMRGRVYLPQDELAQFGLRDEDVFGGKVTDRWREFMKEQITRARYYFNLAEEGASQLDKA 325

Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325
            R P W   ILY ++LD IEDNDYDNLTK+  +GRTK + TLPLA+ KA
Sbjct: 326 SRWPVWSCLILYREILDAIEDNDYDNLTKRAYVGRTKKLLTLPLAYTKA 374


>ref|XP_002304008.1| predicted protein [Populus trichocarpa] gi|222841440|gb|EEE78987.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/109 (64%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178
           AL GRVYLPQDELAQFGL +KD+F+ KVTD+W+E +K QI RARFY++LAEEGA QL+  
Sbjct: 181 ALRGRVYLPQDELAQFGLCDKDVFARKVTDEWRELMKEQITRARFYFNLAEEGASQLEKA 240

Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325
            R P W + ++Y K+LD IEDNDYDN TK+  +GRTK + TLPLA+ KA
Sbjct: 241 SRWPVWSSLLIYRKILDAIEDNDYDNFTKRAFVGRTKKLFTLPLAYSKA 289


>ref|XP_002297643.1| predicted protein [Populus trichocarpa] gi|222844901|gb|EEE82448.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  144 bits (364), Expect = 8e-33
 Identities = 69/109 (63%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178
           AL GRVYLPQDELAQFGL ++D+F+ KVTD W+EF+K QI RARFY++LAEEGA +L+  
Sbjct: 176 ALRGRVYLPQDELAQFGLCDQDVFARKVTDGWREFMKEQIIRARFYFNLAEEGASKLEKA 235

Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325
            R P W + ++Y K+LD IEDNDYDN TK+  +GRTK + TLPLA+ KA
Sbjct: 236 SRWPVWSSLLVYQKILDAIEDNDYDNFTKRAYVGRTKKLLTLPLAYTKA 284


>emb|CBI16500.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/109 (64%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178
           +L GRVYLPQDELAQFGL ++DIFS KV D W+EF+K QI RARFY++ AEEGA QLD  
Sbjct: 178 SLRGRVYLPQDELAQFGLCDRDIFSRKVNDGWREFMKQQITRARFYFNQAEEGASQLDKA 237

Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325
            R P W + +LY K+LD IE+NDYDNLTK+  +GRTK + TLPLA+ +A
Sbjct: 238 SRWPVWSSLLLYRKILDAIEENDYDNLTKRAYVGRTKKLLTLPLAYSRA 286


>ref|XP_002283501.1| PREDICTED: phytoene synthase 2, chloroplastic-like [Vitis vinifera]
          Length = 419

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/109 (64%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178
           +L GRVYLPQDELAQFGL ++DIFS KV D W+EF+K QI RARFY++ AEEGA QLD  
Sbjct: 265 SLRGRVYLPQDELAQFGLCDRDIFSRKVNDGWREFMKQQITRARFYFNQAEEGASQLDKA 324

Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325
            R P W + +LY K+LD IE+NDYDNLTK+  +GRTK + TLPLA+ +A
Sbjct: 325 SRWPVWSSLLLYRKILDAIEENDYDNLTKRAYVGRTKKLLTLPLAYSRA 373


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