BLASTX nr result
ID: Coptis24_contig00008080
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008080 (568 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527067.1| Phytoene synthase, chloroplast precursor, pu... 147 2e-33 ref|XP_002304008.1| predicted protein [Populus trichocarpa] gi|2... 146 2e-33 ref|XP_002297643.1| predicted protein [Populus trichocarpa] gi|2... 144 8e-33 emb|CBI16500.3| unnamed protein product [Vitis vinifera] 144 1e-32 ref|XP_002283501.1| PREDICTED: phytoene synthase 2, chloroplasti... 144 1e-32 >ref|XP_002527067.1| Phytoene synthase, chloroplast precursor, putative [Ricinus communis] gi|223533572|gb|EEF35311.1| Phytoene synthase, chloroplast precursor, putative [Ricinus communis] Length = 385 Score = 147 bits (370), Expect = 2e-33 Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 1/109 (0%) Frame = +2 Query: 2 ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178 A+ GRVYLPQDELAQFGL ++D+F KVTD W+EF+K QI RAR+Y++LAEEGA QLD Sbjct: 266 AMRGRVYLPQDELAQFGLRDEDVFGGKVTDRWREFMKEQITRARYYFNLAEEGASQLDKA 325 Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325 R P W ILY ++LD IEDNDYDNLTK+ +GRTK + TLPLA+ KA Sbjct: 326 SRWPVWSCLILYREILDAIEDNDYDNLTKRAYVGRTKKLLTLPLAYTKA 374 >ref|XP_002304008.1| predicted protein [Populus trichocarpa] gi|222841440|gb|EEE78987.1| predicted protein [Populus trichocarpa] Length = 298 Score = 146 bits (369), Expect = 2e-33 Identities = 70/109 (64%), Positives = 87/109 (79%), Gaps = 1/109 (0%) Frame = +2 Query: 2 ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178 AL GRVYLPQDELAQFGL +KD+F+ KVTD+W+E +K QI RARFY++LAEEGA QL+ Sbjct: 181 ALRGRVYLPQDELAQFGLCDKDVFARKVTDEWRELMKEQITRARFYFNLAEEGASQLEKA 240 Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325 R P W + ++Y K+LD IEDNDYDN TK+ +GRTK + TLPLA+ KA Sbjct: 241 SRWPVWSSLLIYRKILDAIEDNDYDNFTKRAFVGRTKKLFTLPLAYSKA 289 >ref|XP_002297643.1| predicted protein [Populus trichocarpa] gi|222844901|gb|EEE82448.1| predicted protein [Populus trichocarpa] Length = 284 Score = 144 bits (364), Expect = 8e-33 Identities = 69/109 (63%), Positives = 87/109 (79%), Gaps = 1/109 (0%) Frame = +2 Query: 2 ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178 AL GRVYLPQDELAQFGL ++D+F+ KVTD W+EF+K QI RARFY++LAEEGA +L+ Sbjct: 176 ALRGRVYLPQDELAQFGLCDQDVFARKVTDGWREFMKEQIIRARFYFNLAEEGASKLEKA 235 Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325 R P W + ++Y K+LD IEDNDYDN TK+ +GRTK + TLPLA+ KA Sbjct: 236 SRWPVWSSLLVYQKILDAIEDNDYDNFTKRAYVGRTKKLLTLPLAYTKA 284 >emb|CBI16500.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 144 bits (363), Expect = 1e-32 Identities = 70/109 (64%), Positives = 86/109 (78%), Gaps = 1/109 (0%) Frame = +2 Query: 2 ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178 +L GRVYLPQDELAQFGL ++DIFS KV D W+EF+K QI RARFY++ AEEGA QLD Sbjct: 178 SLRGRVYLPQDELAQFGLCDRDIFSRKVNDGWREFMKQQITRARFYFNQAEEGASQLDKA 237 Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325 R P W + +LY K+LD IE+NDYDNLTK+ +GRTK + TLPLA+ +A Sbjct: 238 SRWPVWSSLLLYRKILDAIEENDYDNLTKRAYVGRTKKLLTLPLAYSRA 286 >ref|XP_002283501.1| PREDICTED: phytoene synthase 2, chloroplastic-like [Vitis vinifera] Length = 419 Score = 144 bits (363), Expect = 1e-32 Identities = 70/109 (64%), Positives = 86/109 (78%), Gaps = 1/109 (0%) Frame = +2 Query: 2 ALMGRVYLPQDELAQFGLSEKDIFS-KVTDDWKEFVKFQIKRARFYYSLAEEGAFQLDMT 178 +L GRVYLPQDELAQFGL ++DIFS KV D W+EF+K QI RARFY++ AEEGA QLD Sbjct: 265 SLRGRVYLPQDELAQFGLCDRDIFSRKVNDGWREFMKQQITRARFYFNQAEEGASQLDKA 324 Query: 179 YRLPFWGAAILYSKLLDVIEDNDYDNLTKKVCLGRTKMICTLPLAFIKA 325 R P W + +LY K+LD IE+NDYDNLTK+ +GRTK + TLPLA+ +A Sbjct: 325 SRWPVWSSLLLYRKILDAIEENDYDNLTKRAYVGRTKKLLTLPLAYSRA 373