BLASTX nr result

ID: Coptis24_contig00008079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008079
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272547.1| PREDICTED: uncharacterized protein LOC100250...   378   e-102
ref|XP_003524114.1| PREDICTED: uncharacterized protein LOC100790...   336   9e-90
ref|XP_003532652.1| PREDICTED: uncharacterized protein LOC100819...   335   2e-89
ref|XP_002307555.1| predicted protein [Populus trichocarpa] gi|2...   331   3e-88
ref|XP_002876488.1| hypothetical protein ARALYDRAFT_486377 [Arab...   300   4e-79

>ref|XP_002272547.1| PREDICTED: uncharacterized protein LOC100250429 [Vitis vinifera]
            gi|297740664|emb|CBI30846.3| unnamed protein product
            [Vitis vinifera]
          Length = 356

 Score =  378 bits (971), Expect = e-102
 Identities = 192/349 (55%), Positives = 236/349 (67%)
 Frame = +3

Query: 111  CFSTGLLSVTIALACIDGLIISTFAFYQLIRMQMMNRRLGWTRQKVFHLMIGFSNVGNFV 290
            CF   L +V + LACIDG +++  AF QLIR+   +R+LGWTRQKVFHL+IG SNVG F+
Sbjct: 9    CFPRVLAAVNVVLACIDG-VVALLAFSQLIRIHSRSRQLGWTRQKVFHLIIGSSNVGYFL 67

Query: 291  YFISNLVSTCKRWLCWSHACGFVLMSCPTILFQATFLLLLSFWVDLCHQANXXXXXXXXX 470
            YF+  LV+TCK WLCWS++CGFVLM+CP IL  A FLLLLSFWVDLCHQ +         
Sbjct: 68   YFVLTLVATCKGWLCWSNSCGFVLMACPKILLLAAFLLLLSFWVDLCHQPDDEDDEDEES 127

Query: 471  TCQVGLLDKSKTAPGLSTLGHHRKCCPLHFGHVGSRQKXXXXXXXXXXXXXXXXXXLIWI 650
            + Q  LL+K+   P  S    HRKCC L   H+GSRQK                  LIWI
Sbjct: 128  SSQEALLEKTLNLPSSSNKNSHRKCCSLRAIHIGSRQKIVILVIVLIFVLMVTFAVLIWI 187

Query: 651  GTGKNSIDSSIVARVXXXXXXXXXXXXXXXXXXXXXXXXXKMSKVRSDKASFEMWKVAGL 830
            G GKN IDSS+VARV                         KM KVRS++AS EM KVAGL
Sbjct: 188  GMGKNLIDSSVVARVYVDLFSIAILLLGGALACYGLMLCLKMRKVRSERASSEMSKVAGL 247

Query: 831  AIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYVLWIMR 1010
            A+V V+CFTSSA VAL T+IP+LYHWHP+ VNG+ TS+L+ LYYFIGSSVPSA+VLW+MR
Sbjct: 248  AVVSVICFTSSAFVALFTDIPMLYHWHPQPVNGVSTSLLLILYYFIGSSVPSAFVLWVMR 307

Query: 1011 ELPPAVAVDSERQSSIVTFMSDTTAAMHNSQRWTTATSSQNQASRASPI 1157
            ELPP++      +S  VTF+SD++ ++++ QRW+TATSSQNQ SRASPI
Sbjct: 308  ELPPSITTVIYVESRPVTFISDSSESVNHPQRWSTATSSQNQISRASPI 356


>ref|XP_003524114.1| PREDICTED: uncharacterized protein LOC100790769 [Glycine max]
          Length = 355

 Score =  336 bits (861), Expect = 9e-90
 Identities = 166/348 (47%), Positives = 220/348 (63%)
 Frame = +3

Query: 114  FSTGLLSVTIALACIDGLIISTFAFYQLIRMQMMNRRLGWTRQKVFHLMIGFSNVGNFVY 293
            F   +L+V +ALA +   + +  AF+QL+R+ M N +LGWTRQKVFH++IG SN+G  +Y
Sbjct: 10   FPRPILAVNLALALLHAAV-AFLAFFQLLRIHMRNAQLGWTRQKVFHVLIGSSNLGYVIY 68

Query: 294  FISNLVSTCKRWLCWSHACGFVLMSCPTILFQATFLLLLSFWVDLCHQANXXXXXXXXXT 473
                +V++CK W CWSH+CGF+ M+ P +LF A FLLLLSFWVDLCHQA+          
Sbjct: 69   LALTIVASCKGWTCWSHSCGFIFMAFPKVLFFAAFLLLLSFWVDLCHQADDDDDYEGSF- 127

Query: 474  CQVGLLDKSKTAPGLSTLGHHRKCCPLHFGHVGSRQKXXXXXXXXXXXXXXXXXXLIWIG 653
            C   LL+K+     L+++  HRKC P  F  VG+RQK                  +IWIG
Sbjct: 128  CDNPLLEKTLNESNLASIDSHRKCFPFRFARVGNRQKIVILVTLLVFIIVVAFAVVIWIG 187

Query: 654  TGKNSIDSSIVARVXXXXXXXXXXXXXXXXXXXXXXXXXKMSKVRSDKASFEMWKVAGLA 833
             GKN IDS + AR+                         KMSKVR++K S EMWKVAGL 
Sbjct: 188  LGKNPIDSEVAARIYLYLSAIGMLLLGGALACYGILLCLKMSKVRAEKPSSEMWKVAGLT 247

Query: 834  IVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYVLWIMRE 1013
            IV V+CFTSS+ V L T+IP+ Y+WH R +N + +S+L+ LYYF+GSS+PSA VLW+MRE
Sbjct: 248  IVSVICFTSSSCVELLTDIPMQYNWHQRRLNDVYSSLLLILYYFVGSSIPSAVVLWVMRE 307

Query: 1014 LPPAVAVDSERQSSIVTFMSDTTAAMHNSQRWTTATSSQNQASRASPI 1157
            LPP  A     +SS + F++D++ A+H+ QRW TATS QNQ SRASPI
Sbjct: 308  LPPEEAASIPEESSTIAFVADSSIAIHHPQRWATATSMQNQTSRASPI 355


>ref|XP_003532652.1| PREDICTED: uncharacterized protein LOC100819031 [Glycine max]
          Length = 351

 Score =  335 bits (858), Expect = 2e-89
 Identities = 165/345 (47%), Positives = 220/345 (63%)
 Frame = +3

Query: 108  RCFSTGLLSVTIALACIDGLIISTFAFYQLIRMQMMNRRLGWTRQKVFHLMIGFSNVGNF 287
            RCF   +L+V +ALA +  ++++  AF+QL+R+ M N +LGWTRQKVFH++IG SN+G  
Sbjct: 8    RCFPRPILAVNLALALLH-VVVAFLAFFQLLRIHMRNAQLGWTRQKVFHVLIGSSNLGYV 66

Query: 288  VYFISNLVSTCKRWLCWSHACGFVLMSCPTILFQATFLLLLSFWVDLCHQANXXXXXXXX 467
            +Y    LV+ CK W CWSH+CGFV M+ P +LF A FLLLLSFWVDLCHQA+        
Sbjct: 67   IYLALTLVAACKGWTCWSHSCGFVFMAFPKVLFFAAFLLLLSFWVDLCHQADDDDDYEGS 126

Query: 468  XTCQVGLLDKSKTAPGLSTLGHHRKCCPLHFGHVGSRQKXXXXXXXXXXXXXXXXXXLIW 647
              C   LL+K+     L+++  HRKC P  F  VG+RQK                  +IW
Sbjct: 127  F-CDNPLLEKTSNESNLASIDSHRKCFPFWFARVGNRQKIVILVTLLVFIIVVAFAVVIW 185

Query: 648  IGTGKNSIDSSIVARVXXXXXXXXXXXXXXXXXXXXXXXXXKMSKVRSDKASFEMWKVAG 827
            IG GKN IDS + AR+                         KMS+VR++K S EMWKVAG
Sbjct: 186  IGLGKNPIDSEVAARIYLYLSAIGMLLLGGALACYGILLCLKMSRVRAEKPSSEMWKVAG 245

Query: 828  LAIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYVLWIM 1007
            L IV V+CFTSS+ V L T+IP+ Y+WH R +N + +S+L+ LYYF+GSS+PSA VLW+M
Sbjct: 246  LTIVSVLCFTSSSCVELLTDIPMQYNWHLRRLNDVYSSLLLILYYFVGSSIPSALVLWVM 305

Query: 1008 RELPPAVAVDSERQSSIVTFMSDTTAAMHNSQRWTTATSSQNQAS 1142
            RELPP  A     +SS + F++D++ A+H+ QRWTTATS QNQA+
Sbjct: 306  RELPPEEAASISEESSTIAFVADSSIAIHHPQRWTTATSMQNQAA 350


>ref|XP_002307555.1| predicted protein [Populus trichocarpa] gi|222857004|gb|EEE94551.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  331 bits (848), Expect = 3e-88
 Identities = 174/342 (50%), Positives = 213/342 (62%)
 Frame = +3

Query: 111  CFSTGLLSVTIALACIDGLIISTFAFYQLIRMQMMNRRLGWTRQKVFHLMIGFSNVGNFV 290
            C+   LL   IALACIDG + S  AF QLIR+ + N++ GWTRQKV HLM+G  N+G F+
Sbjct: 7    CYPLDLLIANIALACIDGALAS-IAFSQLIRIFLRNQQSGWTRQKVLHLMVGSCNLGYFI 65

Query: 291  YFISNLVSTCKRWLCWSHACGFVLMSCPTILFQATFLLLLSFWVDLCHQANXXXXXXXXX 470
            YFIS +++TC RWLCWSHACGF+LM+ P ILF A FLLLLSFWVDLCHQAN         
Sbjct: 66   YFISTVIATCNRWLCWSHACGFILMAFPNILFFAVFLLLLSFWVDLCHQANEEDDDDEEN 125

Query: 471  TCQVGLLDKSKTAPGLSTLGHHRKCCPLHFGHVGSRQKXXXXXXXXXXXXXXXXXXLIWI 650
            + Q  LL+ SK  PG +    +R+CC      VGS QK                  +IWI
Sbjct: 126  SSQQPLLESSKNKPGSTNTDSYRRCCSFRGIQVGSHQKFVIAVVVLIFFLMLSFAVVIWI 185

Query: 651  GTGKNSIDSSIVARVXXXXXXXXXXXXXXXXXXXXXXXXXKMSKVRSDKASFEMWKVAGL 830
            G G N IDSS+VARV                         K+ KVRS+ AS EM KVAGL
Sbjct: 186  GAGNNPIDSSVVARVYVDLFATAVLILGGALGCYGLILFLKLRKVRSETASSEMRKVAGL 245

Query: 831  AIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYVLWIMR 1010
            A+V VVCFTSSAVVAL T+IPLLYHW  +++N + T +L+  YYFIGSSVPSA+VLW+MR
Sbjct: 246  AVVSVVCFTSSAVVALLTDIPLLYHWSMKNINEVKTLVLLVFYYFIGSSVPSAFVLWVMR 305

Query: 1011 ELPPAVAVDSERQSSIVTFMSDTTAAMHNSQRWTTATSSQNQ 1136
            EL PA   + + QS  VTF+S       N + W  AT+S+NQ
Sbjct: 306  EL-PAPVTNMQAQSRAVTFISYGAEETLNPRHWVAATTSKNQ 346


>ref|XP_002876488.1| hypothetical protein ARALYDRAFT_486377 [Arabidopsis lyrata subsp.
            lyrata] gi|297322326|gb|EFH52747.1| hypothetical protein
            ARALYDRAFT_486377 [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  300 bits (769), Expect = 4e-79
 Identities = 156/353 (44%), Positives = 213/353 (60%), Gaps = 2/353 (0%)
 Frame = +3

Query: 105  DRCFSTGLLSVTIALACIDGLIISTFAFYQLIRMQMMNRRLGWTRQKVFHLMIGFSNVGN 284
            D+C++   ++V ++LA ID  + +  AF QL R    N+++GWTRQKV HLMIG SN G+
Sbjct: 14   DKCYAPSFIAVNLSLAFIDAAL-AFIAFLQLSRFHRRNKQVGWTRQKVLHLMIGSSNTGS 72

Query: 285  FVYFISNLVSTCKRWLCWSHACGFVLMSCPTILFQATFLLLLSFWVDLCHQANXXXXXXX 464
             VYF++ +++TC RW  WS+A GF+LM+ P ILF ATFLLLLSFWVD+CHQ N       
Sbjct: 73   VVYFVAAIIATCTRWHHWSNALGFLLMAFPKILFLATFLLLLSFWVDVCHQGNGEEDDDD 132

Query: 465  XX--TCQVGLLDKSKTAPGLSTLGHHRKCCPLHFGHVGSRQKXXXXXXXXXXXXXXXXXX 638
                + Q  LL+KS T PG S     RKCC  H  HVG+RQK                  
Sbjct: 133  DEENSIQQVLLEKSNTKPGSSNASDRRKCCSFHGIHVGTRQKFVVAVIILVFILMISFAI 192

Query: 639  LIWIGTGKNSIDSSIVARVXXXXXXXXXXXXXXXXXXXXXXXXXKMSKVRSDKASFEMWK 818
            LIWI +GKN ++SS++A V                          + KVRS++ S EM K
Sbjct: 193  LIWIASGKNPMNSSLLAEVYVDIFAAIILITGGGICFYGLRLLFNLRKVRSEQVSAEMRK 252

Query: 819  VAGLAIVCVVCFTSSAVVALSTNIPLLYHWHPRDVNGILTSILVFLYYFIGSSVPSAYVL 998
            V+GLA V VVCFT S+++AL T+IPL YHW+P  ++GI   +L+ +YYFIG +VP A+VL
Sbjct: 253  VSGLAGVSVVCFTVSSLIALLTHIPLFYHWNPSKLHGIKALVLLIIYYFIGFTVPLAFVL 312

Query: 999  WIMRELPPAVAVDSERQSSIVTFMSDTTAAMHNSQRWTTATSSQNQASRASPI 1157
            W++RELPP   V  +  +  +T+++  T A    Q W + T S+NQ S+ASPI
Sbjct: 313  WVLRELPPQNIVSRQEDTRRITYVNYETVARQPPQDWASTTVSKNQVSKASPI 365


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