BLASTX nr result

ID: Coptis24_contig00008077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008077
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327139.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002510219.1| pentatricopeptide repeat-containing protein,...    61   8e-08
ref|XP_002334752.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002301187.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
dbj|BAC76729.1| alpha-amylase [Vigna angularis]                        57   1e-06

>ref|XP_002327139.1| predicted protein [Populus trichocarpa] gi|222835454|gb|EEE73889.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = -2

Query: 98  GFNWESSNKVGGWYNFLKNSIADLANVGVTHV 3
           GFNWES NK GGWYN LKNS+ DLAN G+THV
Sbjct: 28  GFNWESCNKAGGWYNSLKNSVPDLANAGITHV 59


>ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550920|gb|EEF52406.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = -2

Query: 98  GFNWESSNKVGGWYNFLKNSIADLANVGVTHV 3
           GFNWES NK GGWYN LKNSI D+AN G+THV
Sbjct: 31  GFNWESCNKGGGWYNLLKNSILDIANAGITHV 62


>ref|XP_002334752.1| predicted protein [Populus trichocarpa] gi|222874486|gb|EEF11617.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -2

Query: 98  GFNWESSNKVGGWYNFLKNSIADLANVGVTHV 3
           GFNWES N+ GGWYN LKN + DLAN G+THV
Sbjct: 28  GFNWESCNQAGGWYNSLKNLVPDLANAGITHV 59


>ref|XP_002301187.1| predicted protein [Populus trichocarpa] gi|222842913|gb|EEE80460.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -2

Query: 98  GFNWESSNKVGGWYNFLKNSIADLANVGVTHV 3
           GFNWES N+ GGWYN LKN + DLAN G+THV
Sbjct: 9   GFNWESCNQAGGWYNSLKNLVPDLANAGITHV 40


>dbj|BAC76729.1| alpha-amylase [Vigna angularis]
          Length = 421

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = -2

Query: 98  GFNWESSNKVGGWYNFLKNSIADLANVGVTHV 3
           GFNWESS K GGWYN LKNSI DLAN G+THV
Sbjct: 29  GFNWESSKK-GGWYNSLKNSIPDLANAGITHV 59


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