BLASTX nr result
ID: Coptis24_contig00008071
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008071
(2052 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 689 0.0
ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus ... 608 e-171
ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 603 e-170
ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 599 e-169
ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 599 e-169
>ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
Length = 601
Score = 689 bits (1779), Expect = 0.0
Identities = 343/567 (60%), Positives = 417/567 (73%), Gaps = 14/567 (2%)
Frame = +3
Query: 243 FPVGSKAYHPVLTIHPLSLISIQNSRS-------ETLFQLKVVDRILFPDHVLLLVSKDD 401
FP+G+ ++ PV+ + LSL+S S S L L+V DR+LFPDHVLL+VS +
Sbjct: 46 FPIGTASFRPVVIVSTLSLLSSSTSNSIRDYVSSRLLLPLRVEDRVLFPDHVLLMVSHIN 105
Query: 402 HSLLGVDCIYRIQGELSNASDEELALPVLSMDEYNDLESIIRCPLPPANYSAIVNLRR-- 575
++C+Y + A+++ + PVLS+DE ++L + RCPLPP NYSA VNLRR
Sbjct: 106 DRSEVLECVY-CKDIGVEAANKLIVRPVLSVDELDELRWVARCPLPPQNYSAEVNLRRPP 164
Query: 576 RAKRSVGEDTGSLLVDRAVHSWESLVYGAVLDGETAVVFVKGLNLRADRVSDATQFSCHF 755
R + V D V VHSWE + Y A LD ++AVVFVKGLNLR DR SD QFSCHF
Sbjct: 165 RKESIVDGDEWLRRVHPTVHSWEMMAYAAALDRDSAVVFVKGLNLRPDRESDPRQFSCHF 224
Query: 756 GWDSAERSTKYVLATRAITAAQEVVRCLLPRSLRMLPARATGARVTIGVPSHRHILTRSQ 935
G ER K+ L TRA +AAQEV+RC LPRS+RM P++A G RVT+G+ SH H R+
Sbjct: 225 GTGDRERGGKFALTTRAFSAAQEVIRCSLPRSIRMNPSKAHGIRVTVGLNSHFHANARAS 284
Query: 936 SHRRAGLRGSSKFSSRRLPSVAKLIDSNSRGT-----DSKKHELCVCTMVWNQASSLREW 1100
+H +PSVAK+ S + + K++LCVCTMVWNQASSLREW
Sbjct: 285 NHVL-------------VPSVAKMSSPKSYNSYKHKKNQGKYQLCVCTMVWNQASSLREW 331
Query: 1101 IAYHAWLGVERWFIYDNNSEDNIKEVVKKLEQENYNVSRHVWPWIKTQEAGFSHCALEAK 1280
I YHAWLGVERWFIYDNNS+D KEV+++LE E+YNV+RH WPWIKTQEAGFSHCAL A+
Sbjct: 332 IMYHAWLGVERWFIYDNNSDDRTKEVIQELELEDYNVTRHTWPWIKTQEAGFSHCALRAR 391
Query: 1281 NECKWVGFIDVDEYFYFPVPITHRHPKEEFGYPGRNSLRTMVAEYSNSTTIGEIRTTCHS 1460
+EC WVGF+DVDE+FYFP P THR + + G+NSLRT+VA +S STTIGEIRT CHS
Sbjct: 392 DECNWVGFMDVDEFFYFPFP-THRRGSNKLIFRGQNSLRTLVANFS-STTIGEIRTACHS 449
Query: 1461 FGPSGLTRMPSRGVTVGYTCRLQSPERHKSIIRPDALDDTLLTVVHHFHLKPGYKYFNLP 1640
+GPSGL +PS+GVTVGYTCRLQSPERHKSI+RPD LD TLL VVHHF L+ G+KY NLP
Sbjct: 450 YGPSGLNSLPSQGVTVGYTCRLQSPERHKSIVRPDVLDRTLLNVVHHFRLRKGFKYLNLP 509
Query: 1641 QSTALINHYKYQVWESFKAKFSRRVATYVADWQENQNEGSKDRAPGLGTEAIEPPNWSRR 1820
QST +INHYKYQVWE+F+AKF RRVATYVADWQE +NEGSKDRAPGLGTEAIEPP W +
Sbjct: 510 QSTGVINHYKYQVWEAFRAKFFRRVATYVADWQEKENEGSKDRAPGLGTEAIEPPKWPLQ 569
Query: 1821 FCEVWDTGLRDFIMSNLANQDSGLLPW 1901
FCEVWDTGLRDF+++NLA+ +GLLPW
Sbjct: 570 FCEVWDTGLRDFVLANLADPTTGLLPW 596
>ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|325530317|sp|B9S2H4.1|Y232_RICCO RecName: Full=UPF0392
protein RCOM_0530710 gi|223540685|gb|EEF42248.1|
ubiquitin-protein ligase, putative [Ricinus communis]
Length = 578
Score = 608 bits (1567), Expect = e-171
Identities = 311/559 (55%), Positives = 391/559 (69%), Gaps = 7/559 (1%)
Frame = +3
Query: 246 PVGSKAYHPVLTIHPLSLISIQNSRSETLFQLK-----VVDRILFPDHVLLLVSKDDHSL 410
P+ + ++ PVL + P+SL+ + F K V DR+L PDHVLL+VS +
Sbjct: 47 PIKTVSFRPVLNV-PVSLLPTPLGLTRDSFDTKSLPLIVEDRVLLPDHVLLIVSNKVATS 105
Query: 411 LGVDCIYRIQGELSNASDEELALPVLSMDEYNDLESIIRCPLPPANYSAIVNLRRRAKRS 590
+DC+Y L N+ D L P LS+++Y+ +SI+RC LPP NYSA V LR + +
Sbjct: 106 QNLDCVY---SNLYNSHDVVLK-PALSVNQYHRDKSIVRCQLPPNNYSAAVYLRWSWEAA 161
Query: 591 VGEDTGSLLVDRAVHSWESLVYGAVLDGETAVVFVKGLNLRADRVSDATQFSCHFGWDSA 770
G + +V SW+ +VY A+LD T VFVKGLNLR + SD+++F CHFG
Sbjct: 162 EGVAAAA---PASVVSWDRVVYEAMLDWNTVAVFVKGLNLRPHKESDSSKFRCHFGLSKF 218
Query: 771 ERSTKYVLATRAITAAQEVVRCLLPRSLRMLPARATGARVTIGVPSHRHILTRSQSHRRA 950
++ V T AITAAQEV+RCLLPRS+R P +A G RVT+ S A
Sbjct: 219 DKDEGIVFTTEAITAAQEVIRCLLPRSIRNNPVKAQGIRVTV-------------SRINA 265
Query: 951 GLRGSSKFSSRRLPSVAKLIDSNS--RGTDSKKHELCVCTMVWNQASSLREWIAYHAWLG 1124
G G LPSVAK+ + S + ++ K+ELC CTM+WNQAS L EWI YHAWLG
Sbjct: 266 GEDGVDA----PLPSVAKVYGAKSYEKRSNRGKYELCACTMLWNQASFLHEWITYHAWLG 321
Query: 1125 VERWFIYDNNSEDNIKEVVKKLEQENYNVSRHVWPWIKTQEAGFSHCALEAKNECKWVGF 1304
V+RWFIYDNNS+D I+EVV +L +NYNV+RH WPWIK QEAGFSHCAL A++ECKW+GF
Sbjct: 322 VQRWFIYDNNSDDGIQEVVDELNLQNYNVTRHSWPWIKAQEAGFSHCALRARSECKWLGF 381
Query: 1305 IDVDEYFYFPVPITHRHPKEEFGYPGRNSLRTMVAEYSNSTTIGEIRTTCHSFGPSGLTR 1484
DVDE+FY P RH ++ G NSLRT+VA YS+S+T EIRT CHSFGPSGLT
Sbjct: 382 FDVDEFFYLP-----RHRGQDM--LGENSLRTLVANYSDSSTYAEIRTICHSFGPSGLTS 434
Query: 1485 MPSRGVTVGYTCRLQSPERHKSIIRPDALDDTLLTVVHHFHLKPGYKYFNLPQSTALINH 1664
PS+GVTVGYTCRLQ+PERHKSI+RP+ LD TLL VVHHF LK GY+Y N+P+STA++NH
Sbjct: 435 APSQGVTVGYTCRLQAPERHKSIVRPELLDTTLLNVVHHFKLKEGYRYLNVPESTAVVNH 494
Query: 1665 YKYQVWESFKAKFSRRVATYVADWQENQNEGSKDRAPGLGTEAIEPPNWSRRFCEVWDTG 1844
YKYQVW++FKAKF RRV+TYVA+WQE+QN+GSKDRAPGLGT AIEPP+W RFCEVWDTG
Sbjct: 495 YKYQVWDTFKAKFFRRVSTYVANWQEDQNQGSKDRAPGLGTVAIEPPDWRLRFCEVWDTG 554
Query: 1845 LRDFIMSNLANQDSGLLPW 1901
L+DF+++N A+ SG LPW
Sbjct: 555 LKDFVLANFADTASGYLPW 573
>ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
Length = 605
Score = 603 bits (1555), Expect = e-170
Identities = 317/607 (52%), Positives = 401/607 (66%), Gaps = 26/607 (4%)
Frame = +3
Query: 159 RRLHTKQRWKYTXXXXXXXXXXXXXHGHFPVGSKA-YHPVLTIHPLSLI--SIQNSRSET 329
R LH R + H HF + + + P LT LSL+ S NS +
Sbjct: 16 RHLHISSRSLFLCFSFLIFLLFLSSHHHFFFFTPSTFRPSLTASTLSLLYSSASNSILDP 75
Query: 330 LF----QLKVVDRILFPDHVLLLVS---KDDHSLLGVDCIY-RIQGELSNASDEELAL-- 479
L + RILFPDH LL+++ + L ++C+Y + S++ E L
Sbjct: 76 LIPTTPSYTLQHRILFPDHHLLILTNPQQQQQKLHELECVYYTLHPNASSSGSPEPVLEV 135
Query: 480 ---PVLSMDEYNDLESIIRCPLPPANYSA-----IVNLRRRAKRSVGEDTGSLLVDRAVH 635
PVLS D Y++ SI+RCPLP N SA V+LRRR + VG + +L+++
Sbjct: 136 QVRPVLSTDRYDESRSIVRCPLPQTNSSAGGGPKAVDLRRRGE--VGRRSLGILMNQTAQ 193
Query: 636 SWESLVYGAVLDGETAVVFVKGLNLRADRVSDATQFSCHFGWDSAERSTKYVLATRAITA 815
SW+ + Y A LDG+T VVFVKGLNLR ++SD T+ CHFG S + ++L TRA++
Sbjct: 194 SWDRVAYEATLDGDTVVVFVKGLNLRPHKISDPTRIRCHFGLKSFHKDNAFLLTTRAVSV 253
Query: 816 AQEVVRCLLPRSLRMLPARATGARVTIGVPSHRHILTRSQSHRRAGLRGSSKFSSRRL-P 992
AQEVVRC+LP+S+R P +A G RVT+ L G+ + R L P
Sbjct: 254 AQEVVRCMLPQSIRNDPDKARGIRVTVSY-----------------LGGNVRHPVRVLVP 296
Query: 993 SVAKLIDSNSRGT----DSKKHELCVCTMVWNQASSLREWIAYHAWLGVERWFIYDNNSE 1160
SVA++ G + KKHELC CTMVWNQAS+LREW+ YHAWLGVERWFIYDNNS+
Sbjct: 297 SVARVSSPGGGGRVQKRNRKKHELCACTMVWNQASALREWVTYHAWLGVERWFIYDNNSD 356
Query: 1161 DNIKEVVKKLEQENYNVSRHVWPWIKTQEAGFSHCALEAKNECKWVGFIDVDEYFYFPVP 1340
D+I+ VV+ L+ + +NVSR WPWIKTQEAGFSHCAL A+ ECKWVGF DVDE+FYFP
Sbjct: 357 DDIENVVQDLDLQGFNVSRKSWPWIKTQEAGFSHCALRAREECKWVGFFDVDEFFYFPSE 416
Query: 1341 ITHRHPKEEFGYPGRNSLRTMVAEYSNSTTIGEIRTTCHSFGPSGLTRMPSRGVTVGYTC 1520
+ P E G PG N LR++VA +S S +I EIRT CHSFGPSGL P +GVT+GYTC
Sbjct: 417 F--QQPLGE-GVPGENYLRSVVANFSYSKSIAEIRTACHSFGPSGLKSPPKQGVTLGYTC 473
Query: 1521 RLQSPERHKSIIRPDALDDTLLTVVHHFHLKPGYKYFNLPQSTALINHYKYQVWESFKAK 1700
RLQSPERHKSI+RPD LD +LL VVHHF L+ G++Y N+P+ TA++NHYKYQVWE+FKAK
Sbjct: 474 RLQSPERHKSIVRPDLLDISLLNVVHHFQLRVGFRYHNMPEGTAIVNHYKYQVWETFKAK 533
Query: 1701 FSRRVATYVADWQENQNEGSKDRAPGLGTEAIEPPNWSRRFCEVWDTGLRDFIMSNLANQ 1880
F RRVATYV DWQE+QN+GSKDRAPGLGTEAIEPPNW R+FCEVWDTGL+DF++S A
Sbjct: 534 FFRRVATYVVDWQEDQNKGSKDRAPGLGTEAIEPPNWRRQFCEVWDTGLKDFLVSYFAEP 593
Query: 1881 DSGLLPW 1901
+GL+PW
Sbjct: 594 ATGLMPW 600
>ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
Length = 598
Score = 599 bits (1545), Expect = e-169
Identities = 310/571 (54%), Positives = 393/571 (68%), Gaps = 18/571 (3%)
Frame = +3
Query: 243 FPVGSKAYHPVLTIHPLSLI---------SIQNSRSETLFQLKVVDRILFPDHVLLLVSK 395
F + + ++ PVL +L ++ NS S LK+ R+LFPDH+LL+VS
Sbjct: 47 FSIAAASFRPVLDASSTTLSRLSTSASKSTLDNSLSSKYSPLKIESRVLFPDHLLLMVSG 106
Query: 396 DDHSLLGVDCIYRIQGELSNASDEE-LALPVLSMDEYNDLESIIRCPLPPANYSA-IVNL 569
+ +DC+Y ++ SD E L VLS D+Y++ SI RCPLPP NYSA V+L
Sbjct: 107 EFGRDEKLDCLYH--KSVARGSDRETLKQSVLSTDKYDEFRSIARCPLPPLNYSASAVDL 164
Query: 570 RRRAKRSVGEDTGSLLVDR-AVHSWESLVYGAVLDGETAVVFVKGLNLRADRVSDATQFS 746
RR V D L+ +R V SWE +VY A +DG T VVF KGLNLR R S+ +FS
Sbjct: 165 RRGG---VEADDHWLVRNRHPVASWERVVYEAAIDGNTVVVFAKGLNLRPHRESNPAEFS 221
Query: 747 CHFGWDSAERSTKYVLATRAITAAQEVVRCLLPRSLRMLPARATGARVTIGVPSHRHILT 926
CHF ++ + +YV T+A+ AAQE++RC LP S+ + G RVT+ +
Sbjct: 222 CHFRLGNSNNNGEYVHTTKAVAAAQEIIRCSLPASVPSSLDKEKGIRVTV---------S 272
Query: 927 RSQSHRRAGLRGSSKFSSRRLPSVAKLIDS--NSRGTDSKKHELCVCTMVWNQASSLREW 1100
R H + L+ + LPSVA+L DS + + +KHELCVCTMVWNQA++LREW
Sbjct: 273 RGSIHSKTHLQVT-------LPSVARLFDSRLSDLQRNQEKHELCVCTMVWNQAAALREW 325
Query: 1101 IAYHAWLGVERWFIYDNNSEDNIKEVVKKLEQENYNVSRHVWPWIKTQEAGFSHCALEAK 1280
I YHAWLGV RWFIYDNNS+DNI+++V++L E+YN+SR WPW+KTQEAGFSHCAL A+
Sbjct: 326 IMYHAWLGVGRWFIYDNNSDDNIEKIVRELNLEDYNISRLTWPWLKTQEAGFSHCALRAR 385
Query: 1281 NECKWVGFIDVDEYFYFPVPITHRHPKEEFGYPGRNSLRTMVAEYS----NSTTIGEIRT 1448
+ECKWVGF DVDE+FYFP H+ E+ GRN+L +++AE S NSTTI EIRT
Sbjct: 386 DECKWVGFFDVDEFFYFPSKYRHQR---EYHTAGRNALHSLIAESSASSSNSTTIAEIRT 442
Query: 1449 TCHSFGPSGLTRMPSRGVTVGYTCRLQSPERHKSIIRPDALDDTLLTVVHHFHLKPGYKY 1628
CHSFGPSGLT P +GVT+GYTCRLQSPERHKS +RPD LD TLL +VHHF LK G+ +
Sbjct: 443 ACHSFGPSGLTSHPPQGVTMGYTCRLQSPERHKSFVRPDLLDITLLNIVHHFRLKRGFGF 502
Query: 1629 FNLPQSTALINHYKYQVWESFKAKFSRRVATYVADWQENQNEGSKDRAPGLGTEAIEPPN 1808
F++P+S A+INHYKYQVWE+F+AKF RRVATYV DWQE QNEGSKDRAPGLGTEAIEPPN
Sbjct: 503 FDVPKSNAVINHYKYQVWETFRAKFFRRVATYVVDWQEAQNEGSKDRAPGLGTEAIEPPN 562
Query: 1809 WSRRFCEVWDTGLRDFIMSNLANQDSGLLPW 1901
W +FCEVWDTGLRDF+ + ++ +G LPW
Sbjct: 563 WRLQFCEVWDTGLRDFVQTLFSDPLTGYLPW 593
>ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
Length = 598
Score = 599 bits (1545), Expect = e-169
Identities = 310/571 (54%), Positives = 393/571 (68%), Gaps = 18/571 (3%)
Frame = +3
Query: 243 FPVGSKAYHPVLTIHPLSLI---------SIQNSRSETLFQLKVVDRILFPDHVLLLVSK 395
F + + ++ PVL +L ++ NS S LK+ R+LFPDH+LL+VS
Sbjct: 47 FSIAAASFRPVLDASSTTLSRLSTSASKSTLDNSLSSKYSPLKIESRVLFPDHLLLMVSG 106
Query: 396 DDHSLLGVDCIYRIQGELSNASDEE-LALPVLSMDEYNDLESIIRCPLPPANYSA-IVNL 569
+ +DC+Y ++ SD E L VLS D+Y++ SI RCPLPP NYSA V+L
Sbjct: 107 EFGRDEKLDCLYH--KSVARGSDRETLKQSVLSTDKYDEFRSIARCPLPPLNYSASAVDL 164
Query: 570 RRRAKRSVGEDTGSLLVDR-AVHSWESLVYGAVLDGETAVVFVKGLNLRADRVSDATQFS 746
RR V D L+ +R V SWE +VY A +DG T VVF KGLNLR R S+ +FS
Sbjct: 165 RRGG---VEADDHWLVRNRHPVASWERVVYEAAIDGNTVVVFAKGLNLRPHRESNPAEFS 221
Query: 747 CHFGWDSAERSTKYVLATRAITAAQEVVRCLLPRSLRMLPARATGARVTIGVPSHRHILT 926
CHF ++ + +YV T+A+ AAQE++RC LP S+ + G RVT+ +
Sbjct: 222 CHFRLGNSNNNGEYVHTTKAVAAAQEIIRCSLPASVPSSLDKEKGIRVTV---------S 272
Query: 927 RSQSHRRAGLRGSSKFSSRRLPSVAKLIDS--NSRGTDSKKHELCVCTMVWNQASSLREW 1100
R H + L+ + LPSVA+L DS + + +KHELCVCTMVWNQA++LREW
Sbjct: 273 RGSIHSKTHLQVT-------LPSVARLFDSKLSDLQRNQEKHELCVCTMVWNQAAALREW 325
Query: 1101 IAYHAWLGVERWFIYDNNSEDNIKEVVKKLEQENYNVSRHVWPWIKTQEAGFSHCALEAK 1280
I YHAWLGV RWFIYDNNS+DNI+++V++L E+YN+SR WPW+KTQEAGFSHCAL A+
Sbjct: 326 IMYHAWLGVGRWFIYDNNSDDNIEKIVRELNLEDYNISRLTWPWLKTQEAGFSHCALRAR 385
Query: 1281 NECKWVGFIDVDEYFYFPVPITHRHPKEEFGYPGRNSLRTMVAEYS----NSTTIGEIRT 1448
+ECKWVGF DVDE+FYFP H+ E+ GRN+L +++AE S NSTTI EIRT
Sbjct: 386 DECKWVGFFDVDEFFYFPSKYRHQR---EYHTAGRNALHSLIAESSASSSNSTTIAEIRT 442
Query: 1449 TCHSFGPSGLTRMPSRGVTVGYTCRLQSPERHKSIIRPDALDDTLLTVVHHFHLKPGYKY 1628
CHSFGPSGLT P +GVT+GYTCRLQSPERHKS +RPD LD TLL +VHHF LK G+ +
Sbjct: 443 ACHSFGPSGLTSHPPQGVTMGYTCRLQSPERHKSFVRPDLLDITLLNIVHHFRLKRGFGF 502
Query: 1629 FNLPQSTALINHYKYQVWESFKAKFSRRVATYVADWQENQNEGSKDRAPGLGTEAIEPPN 1808
F++P+S A+INHYKYQVWE+F+AKF RRVATYV DWQE QNEGSKDRAPGLGTEAIEPPN
Sbjct: 503 FDVPKSNAVINHYKYQVWETFRAKFFRRVATYVVDWQEAQNEGSKDRAPGLGTEAIEPPN 562
Query: 1809 WSRRFCEVWDTGLRDFIMSNLANQDSGLLPW 1901
W +FCEVWDTGLRDF+ + ++ +G LPW
Sbjct: 563 WRLQFCEVWDTGLRDFVQTLFSDPLTGYLPW 593