BLASTX nr result
ID: Coptis24_contig00008068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008068
(734 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltra... 197 3e-98
emb|CBI31225.3| unnamed protein product [Vitis vinifera] 197 3e-98
ref|XP_002319726.1| predicted protein [Populus trichocarpa] gi|2... 197 1e-96
ref|XP_002525684.1| polyribonucleotide nucleotidyltransferase, p... 194 2e-95
ref|XP_002325864.1| predicted protein [Populus trichocarpa] gi|2... 190 9e-95
>ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltransferase [Vitis
vinifera]
Length = 946
Score = 197 bits (501), Expect(3) = 3e-98
Identities = 99/108 (91%), Positives = 101/108 (93%)
Frame = +2
Query: 257 GSALFTCGETQSLAVVTLGDMQMAQRVDNLVDVEEFKRFYLQYSFPPSCVGEVGCMGAPS 436
GSALFT GETQSLAVVTLGD QMAQR+DNLVDV+E KRFYLQYSFPPSCVGEVG MGAPS
Sbjct: 461 GSALFTRGETQSLAVVTLGDRQMAQRIDNLVDVDELKRFYLQYSFPPSCVGEVGRMGAPS 520
Query: 437 RREAGHGMLAERALEPILPSETDFPYIIRVESTITESNGSSSMASVCG 580
RRE GHGMLAERALEPILPSE DFPY IRVESTITESNGSSSMASVCG
Sbjct: 521 RREIGHGMLAERALEPILPSEDDFPYTIRVESTITESNGSSSMASVCG 568
Score = 119 bits (298), Expect(3) = 3e-98
Identities = 58/69 (84%), Positives = 60/69 (86%)
Frame = +1
Query: 64 HITPASRKAIPLLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGIRLINSQCGLL 243
HI P RK+ PL FSEVDVKLVFKEVTSKFLR+RIVEGGKRSDGRTP GIRLINSQCGLL
Sbjct: 397 HIKPIPRKSSPLFFSEVDVKLVFKEVTSKFLRRRIVEGGKRSDGRTPDGIRLINSQCGLL 456
Query: 244 PRAHGECTF 270
PRAHG F
Sbjct: 457 PRAHGSALF 465
Score = 90.1 bits (222), Expect(3) = 3e-98
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +3
Query: 576 VAVHDAGVPVKGLIAGIAMGLVLDTEEFGGDGMPLILSDITGSEDTSGDMDFK 734
+A+ DAGVPVK IAGIAMG+VL+TEEFGGDG PLILSDITGSED SGDMDFK
Sbjct: 571 LALQDAGVPVKYSIAGIAMGMVLNTEEFGGDGTPLILSDITGSEDASGDMDFK 623
>emb|CBI31225.3| unnamed protein product [Vitis vinifera]
Length = 942
Score = 197 bits (501), Expect(3) = 3e-98
Identities = 99/108 (91%), Positives = 101/108 (93%)
Frame = +2
Query: 257 GSALFTCGETQSLAVVTLGDMQMAQRVDNLVDVEEFKRFYLQYSFPPSCVGEVGCMGAPS 436
GSALFT GETQSLAVVTLGD QMAQR+DNLVDV+E KRFYLQYSFPPSCVGEVG MGAPS
Sbjct: 461 GSALFTRGETQSLAVVTLGDRQMAQRIDNLVDVDELKRFYLQYSFPPSCVGEVGRMGAPS 520
Query: 437 RREAGHGMLAERALEPILPSETDFPYIIRVESTITESNGSSSMASVCG 580
RRE GHGMLAERALEPILPSE DFPY IRVESTITESNGSSSMASVCG
Sbjct: 521 RREIGHGMLAERALEPILPSEDDFPYTIRVESTITESNGSSSMASVCG 568
Score = 119 bits (298), Expect(3) = 3e-98
Identities = 58/69 (84%), Positives = 60/69 (86%)
Frame = +1
Query: 64 HITPASRKAIPLLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGIRLINSQCGLL 243
HI P RK+ PL FSEVDVKLVFKEVTSKFLR+RIVEGGKRSDGRTP GIRLINSQCGLL
Sbjct: 397 HIKPIPRKSSPLFFSEVDVKLVFKEVTSKFLRRRIVEGGKRSDGRTPDGIRLINSQCGLL 456
Query: 244 PRAHGECTF 270
PRAHG F
Sbjct: 457 PRAHGSALF 465
Score = 90.1 bits (222), Expect(3) = 3e-98
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +3
Query: 576 VAVHDAGVPVKGLIAGIAMGLVLDTEEFGGDGMPLILSDITGSEDTSGDMDFK 734
+A+ DAGVPVK IAGIAMG+VL+TEEFGGDG PLILSDITGSED SGDMDFK
Sbjct: 571 LALQDAGVPVKYSIAGIAMGMVLNTEEFGGDGTPLILSDITGSEDASGDMDFK 623
>ref|XP_002319726.1| predicted protein [Populus trichocarpa] gi|222858102|gb|EEE95649.1|
predicted protein [Populus trichocarpa]
Length = 853
Score = 197 bits (501), Expect(3) = 1e-96
Identities = 99/108 (91%), Positives = 101/108 (93%)
Frame = +2
Query: 257 GSALFTCGETQSLAVVTLGDMQMAQRVDNLVDVEEFKRFYLQYSFPPSCVGEVGCMGAPS 436
GSALFT GETQSLAVVTLGD QMAQRVDNLVD EEFKRFYLQYSFPPSCVGEVG +GAPS
Sbjct: 400 GSALFTRGETQSLAVVTLGDKQMAQRVDNLVDEEEFKRFYLQYSFPPSCVGEVGRIGAPS 459
Query: 437 RREAGHGMLAERALEPILPSETDFPYIIRVESTITESNGSSSMASVCG 580
RRE GHGMLAERALEPILPSE DFPY +RVESTITESNGSSSMASVCG
Sbjct: 460 RREIGHGMLAERALEPILPSENDFPYTVRVESTITESNGSSSMASVCG 507
Score = 110 bits (276), Expect(3) = 1e-96
Identities = 54/69 (78%), Positives = 58/69 (84%)
Frame = +1
Query: 64 HITPASRKAIPLLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGIRLINSQCGLL 243
HI P R++ P LFSEVDVKLVFKEVTSKFLR+RIVEGGKRSDGRTP GIR I+S CGLL
Sbjct: 336 HIKPNGRRSSPSLFSEVDVKLVFKEVTSKFLRRRIVEGGKRSDGRTPEGIRPIDSSCGLL 395
Query: 244 PRAHGECTF 270
PRAHG F
Sbjct: 396 PRAHGSALF 404
Score = 93.6 bits (231), Expect(3) = 1e-96
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +3
Query: 576 VAVHDAGVPVKGLIAGIAMGLVLDTEEFGGDGMPLILSDITGSEDTSGDMDFK 734
+A+ DAGVPVK +IAGIAMG+VLDTEEFGGDG PLILSDITGSED SGDMDFK
Sbjct: 510 LALQDAGVPVKCMIAGIAMGMVLDTEEFGGDGTPLILSDITGSEDASGDMDFK 562
>ref|XP_002525684.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
communis] gi|223534984|gb|EEF36667.1| polyribonucleotide
nucleotidyltransferase, putative [Ricinus communis]
Length = 948
Score = 194 bits (492), Expect(3) = 2e-95
Identities = 98/108 (90%), Positives = 100/108 (92%)
Frame = +2
Query: 257 GSALFTCGETQSLAVVTLGDMQMAQRVDNLVDVEEFKRFYLQYSFPPSCVGEVGCMGAPS 436
GSALFT GETQSLAV TLGD QMAQ+VDNLVDV+EFKRFYLQYSFPPS VGEVG MGAPS
Sbjct: 474 GSALFTRGETQSLAVATLGDKQMAQKVDNLVDVDEFKRFYLQYSFPPSSVGEVGRMGAPS 533
Query: 437 RREAGHGMLAERALEPILPSETDFPYIIRVESTITESNGSSSMASVCG 580
RRE GHGMLAERALEPILPSE DFPY IRVESTITESNGSSSMASVCG
Sbjct: 534 RREIGHGMLAERALEPILPSEADFPYTIRVESTITESNGSSSMASVCG 581
Score = 111 bits (277), Expect(3) = 2e-95
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = +1
Query: 64 HITPASRKAIPLLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGIRLINSQCGLL 243
HI P SRK+ PLL+SEVDVKLVFKEVTS+FLR+RIVEGGKRSDGR GIR INS+CGLL
Sbjct: 410 HIKPVSRKSSPLLYSEVDVKLVFKEVTSQFLRRRIVEGGKRSDGRNADGIRPINSRCGLL 469
Query: 244 PRAHGECTF 270
PRAHG F
Sbjct: 470 PRAHGSALF 478
Score = 92.0 bits (227), Expect(3) = 2e-95
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +3
Query: 576 VAVHDAGVPVKGLIAGIAMGLVLDTEEFGGDGMPLILSDITGSEDTSGDMDFK 734
+A+ DAGVPVK IAGIAMG+VLDTEEFGGDG PLILSDITGSED SGDMDFK
Sbjct: 584 LALQDAGVPVKCSIAGIAMGMVLDTEEFGGDGTPLILSDITGSEDASGDMDFK 636
>ref|XP_002325864.1| predicted protein [Populus trichocarpa] gi|222862739|gb|EEF00246.1|
predicted protein [Populus trichocarpa]
Length = 730
Score = 190 bits (483), Expect(3) = 9e-95
Identities = 95/108 (87%), Positives = 99/108 (91%)
Frame = +2
Query: 257 GSALFTCGETQSLAVVTLGDMQMAQRVDNLVDVEEFKRFYLQYSFPPSCVGEVGCMGAPS 436
GSALFT GETQSLAVVTLGD QMAQRVDNLVD EEFKRFYLQY FPPSCVGEVG +GAPS
Sbjct: 404 GSALFTRGETQSLAVVTLGDKQMAQRVDNLVDEEEFKRFYLQYLFPPSCVGEVGRIGAPS 463
Query: 437 RREAGHGMLAERALEPILPSETDFPYIIRVESTITESNGSSSMASVCG 580
RRE GHGML ERAL+PILPS+ DFPY +RVESTITESNGSSSMASVCG
Sbjct: 464 RREIGHGMLVERALKPILPSDDDFPYTVRVESTITESNGSSSMASVCG 511
Score = 111 bits (277), Expect(3) = 9e-95
Identities = 55/69 (79%), Positives = 58/69 (84%)
Frame = +1
Query: 64 HITPASRKAIPLLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPSGIRLINSQCGLL 243
HI P RK PLLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTP IR I+S+CG+L
Sbjct: 340 HIKPIGRKFSPLLFSEVDVKLVFKEVTSKFLRKRIVEGGKRSDGRTPDRIRPIDSRCGIL 399
Query: 244 PRAHGECTF 270
PRAHG F
Sbjct: 400 PRAHGSALF 408
Score = 93.6 bits (231), Expect(3) = 9e-95
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = +3
Query: 576 VAVHDAGVPVKGLIAGIAMGLVLDTEEFGGDGMPLILSDITGSEDTSGDMDFK 734
+A+ DAGVPVK +IAGIAMG+VLDTEEFGGDG PLILSDITGSED SGDMDFK
Sbjct: 514 LALQDAGVPVKCMIAGIAMGMVLDTEEFGGDGTPLILSDITGSEDASGDMDFK 566