BLASTX nr result
ID: Coptis24_contig00008057
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008057 (573 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g2624... 177 8e-43 ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago ... 163 2e-38 ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|1... 163 2e-38 ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycin... 162 5e-38 ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|2... 162 5e-38 >ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera] gi|297737418|emb|CBI26619.3| unnamed protein product [Vitis vinifera] Length = 119 Score = 177 bits (450), Expect = 8e-43 Identities = 88/119 (73%), Positives = 96/119 (80%), Gaps = 12/119 (10%) Frame = +1 Query: 40 MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201 MHDFCFTIPYGL+L+ G ++GYAKKGS ASL GG GTGF+LILAG LSL FKK Sbjct: 1 MHDFCFTIPYGLVLVGGGIVGYAKKGSLASLGGGLGTGFVLILAGYLSLKAFKKKKNSYL 60 Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360 +CA LTWVMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIPTKAE Sbjct: 61 ALILETVCAAALTWVMGQRYMQTSKIMPAGIVAGISALMTTFYLYKIATGGNHIPTKAE 119 >ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago truncatula] gi|217071360|gb|ACJ84040.1| unknown [Medicago truncatula] gi|355518826|gb|AET00450.1| hypothetical protein MTR_5g092160 [Medicago truncatula] gi|388495030|gb|AFK35581.1| unknown [Medicago truncatula] Length = 121 Score = 163 bits (413), Expect = 2e-38 Identities = 82/119 (68%), Positives = 93/119 (78%), Gaps = 12/119 (10%) Frame = +1 Query: 40 MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201 MHDFCFTIPYGL+L+ G + G+ KGSTASLAGG GTG +LILAG LSLN F K Sbjct: 1 MHDFCFTIPYGLVLVGGGLFGFIHKGSTASLAGGVGTGLLLILAGYLSLNAFGKRKNSYL 60 Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360 LCA VLTW+MGQRYLQTSKIMPAG++AG+SALMT FYLYK+ATGGNHIP A+ Sbjct: 61 ALAIEILCAGVLTWIMGQRYLQTSKIMPAGMIAGLSALMTLFYLYKLATGGNHIPATAK 119 >ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|118488838|gb|ABK96229.1| unknown [Populus trichocarpa x Populus deltoides] gi|222858214|gb|EEE95761.1| predicted protein [Populus trichocarpa] Length = 119 Score = 163 bits (413), Expect = 2e-38 Identities = 83/119 (69%), Positives = 92/119 (77%), Gaps = 12/119 (10%) Frame = +1 Query: 40 MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201 MHDFCFTIPYGL+L+ G VIGY KKGS ASL GG GTG +LI AG LSL F+K Sbjct: 1 MHDFCFTIPYGLVLVIGGVIGYLKKGSMASLGGGAGTGLVLIFAGYLSLKAFEKRKNSFL 60 Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360 +CA +LT+VMGQRY+QTSKIMPAG+VAGISALMT FYLYKIA GGNHIP KAE Sbjct: 61 GLAIETVCAAILTFVMGQRYMQTSKIMPAGIVAGISALMTLFYLYKIAAGGNHIPAKAE 119 >ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycine max] gi|255627833|gb|ACU14261.1| unknown [Glycine max] Length = 119 Score = 162 bits (409), Expect = 5e-38 Identities = 81/119 (68%), Positives = 92/119 (77%), Gaps = 12/119 (10%) Frame = +1 Query: 40 MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201 MHDFCFTIPYGL+L+ G + Y KGS ASLAGG G+G +LI+AG LSLN F K Sbjct: 1 MHDFCFTIPYGLMLVGGGLFAYISKGSIASLAGGVGSGLLLIVAGYLSLNAFGKRKNSYL 60 Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360 +CA +LTWVMGQRYL TSKIMPAG+VAGISALMT FYLYK+ATGGNH+PTKAE Sbjct: 61 ALFLETVCAAILTWVMGQRYLGTSKIMPAGLVAGISALMTLFYLYKLATGGNHLPTKAE 119 >ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|222860655|gb|EEE98202.1| predicted protein [Populus trichocarpa] Length = 119 Score = 162 bits (409), Expect = 5e-38 Identities = 83/119 (69%), Positives = 91/119 (76%), Gaps = 12/119 (10%) Frame = +1 Query: 40 MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201 MHDFCFTIPYGL++ G VIGY +KGS ASL GG GTG +LI AG LSL F K Sbjct: 1 MHDFCFTIPYGLVIGIGGVIGYLRKGSVASLGGGVGTGLVLIFAGYLSLKAFSKGKNSFL 60 Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360 +CA VLT+VMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIP KAE Sbjct: 61 GLAIETVCAAVLTFVMGQRYMQTSKIMPAGIVAGISALMTVFYLYKIATGGNHIPAKAE 119