BLASTX nr result

ID: Coptis24_contig00008057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008057
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g2624...   177   8e-43
ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago ...   163   2e-38
ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|1...   163   2e-38
ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycin...   162   5e-38
ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38

>ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
           gi|297737418|emb|CBI26619.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  177 bits (450), Expect = 8e-43
 Identities = 88/119 (73%), Positives = 96/119 (80%), Gaps = 12/119 (10%)
 Frame = +1

Query: 40  MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201
           MHDFCFTIPYGL+L+ G ++GYAKKGS ASL GG GTGF+LILAG LSL  FKK      
Sbjct: 1   MHDFCFTIPYGLVLVGGGIVGYAKKGSLASLGGGLGTGFVLILAGYLSLKAFKKKKNSYL 60

Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360
                 +CA  LTWVMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIPTKAE
Sbjct: 61  ALILETVCAAALTWVMGQRYMQTSKIMPAGIVAGISALMTTFYLYKIATGGNHIPTKAE 119


>ref|XP_003617491.1| hypothetical protein MTR_5g092160 [Medicago truncatula]
           gi|217071360|gb|ACJ84040.1| unknown [Medicago
           truncatula] gi|355518826|gb|AET00450.1| hypothetical
           protein MTR_5g092160 [Medicago truncatula]
           gi|388495030|gb|AFK35581.1| unknown [Medicago
           truncatula]
          Length = 121

 Score =  163 bits (413), Expect = 2e-38
 Identities = 82/119 (68%), Positives = 93/119 (78%), Gaps = 12/119 (10%)
 Frame = +1

Query: 40  MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201
           MHDFCFTIPYGL+L+ G + G+  KGSTASLAGG GTG +LILAG LSLN F K      
Sbjct: 1   MHDFCFTIPYGLVLVGGGLFGFIHKGSTASLAGGVGTGLLLILAGYLSLNAFGKRKNSYL 60

Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360
                 LCA VLTW+MGQRYLQTSKIMPAG++AG+SALMT FYLYK+ATGGNHIP  A+
Sbjct: 61  ALAIEILCAGVLTWIMGQRYLQTSKIMPAGMIAGLSALMTLFYLYKLATGGNHIPATAK 119


>ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|118488838|gb|ABK96229.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222858214|gb|EEE95761.1| predicted protein [Populus
           trichocarpa]
          Length = 119

 Score =  163 bits (413), Expect = 2e-38
 Identities = 83/119 (69%), Positives = 92/119 (77%), Gaps = 12/119 (10%)
 Frame = +1

Query: 40  MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201
           MHDFCFTIPYGL+L+ G VIGY KKGS ASL GG GTG +LI AG LSL  F+K      
Sbjct: 1   MHDFCFTIPYGLVLVIGGVIGYLKKGSMASLGGGAGTGLVLIFAGYLSLKAFEKRKNSFL 60

Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360
                 +CA +LT+VMGQRY+QTSKIMPAG+VAGISALMT FYLYKIA GGNHIP KAE
Sbjct: 61  GLAIETVCAAILTFVMGQRYMQTSKIMPAGIVAGISALMTLFYLYKIAAGGNHIPAKAE 119


>ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycine max]
           gi|255627833|gb|ACU14261.1| unknown [Glycine max]
          Length = 119

 Score =  162 bits (409), Expect = 5e-38
 Identities = 81/119 (68%), Positives = 92/119 (77%), Gaps = 12/119 (10%)
 Frame = +1

Query: 40  MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201
           MHDFCFTIPYGL+L+ G +  Y  KGS ASLAGG G+G +LI+AG LSLN F K      
Sbjct: 1   MHDFCFTIPYGLMLVGGGLFAYISKGSIASLAGGVGSGLLLIVAGYLSLNAFGKRKNSYL 60

Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360
                 +CA +LTWVMGQRYL TSKIMPAG+VAGISALMT FYLYK+ATGGNH+PTKAE
Sbjct: 61  ALFLETVCAAILTWVMGQRYLGTSKIMPAGLVAGISALMTLFYLYKLATGGNHLPTKAE 119


>ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|222860655|gb|EEE98202.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score =  162 bits (409), Expect = 5e-38
 Identities = 83/119 (69%), Positives = 91/119 (76%), Gaps = 12/119 (10%)
 Frame = +1

Query: 40  MHDFCFTIPYGLLLLSG*VIGYAKKGSTASLAGGCGTGFILILAGVLSLNGFKK------ 201
           MHDFCFTIPYGL++  G VIGY +KGS ASL GG GTG +LI AG LSL  F K      
Sbjct: 1   MHDFCFTIPYGLVIGIGGVIGYLRKGSVASLGGGVGTGLVLIFAGYLSLKAFSKGKNSFL 60

Query: 202 ------LCAVVLTWVMGQRYLQTSKIMPAGVVAGISALMTGFYLYKIATGGNHIPTKAE 360
                 +CA VLT+VMGQRY+QTSKIMPAG+VAGISALMT FYLYKIATGGNHIP KAE
Sbjct: 61  GLAIETVCAAVLTFVMGQRYMQTSKIMPAGIVAGISALMTVFYLYKIATGGNHIPAKAE 119


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