BLASTX nr result
ID: Coptis24_contig00008054
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008054 (877 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304171.1| predicted protein [Populus trichocarpa] gi|2... 222 8e-56 ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|2... 221 2e-55 ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|2... 220 4e-55 dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum] 220 4e-55 ref|XP_002890110.1| CYCA2_3 [Arabidopsis lyrata subsp. lyrata] g... 218 2e-54 >ref|XP_002304171.1| predicted protein [Populus trichocarpa] gi|222841603|gb|EEE79150.1| predicted protein [Populus trichocarpa] Length = 463 Score = 222 bits (566), Expect = 8e-56 Identities = 110/162 (67%), Positives = 130/162 (80%) Frame = -1 Query: 877 FCFITDNTYARMEVLEMESKVLNNLEFQISTPTIKTFVRRFLRAAQASYKAPSVXXXXXX 698 FCFITDNTY +EVL+ME++VLN FQI PT KTF+RRFLRAAQASYK PS Sbjct: 302 FCFITDNTYTSIEVLKMETQVLNFFGFQIIAPTAKTFLRRFLRAAQASYKNPSYELEFLA 361 Query: 697 XXXXXLTMVEYAFLKFLPSLVAASAIFLARWTLDQSSHPWNPTLEHYTSYKALDLNSTVS 518 LT+V+Y+FL FLPS++AAS++FLARWTLDQ+SHPW+PTLEHY+SYKA DL +TV Sbjct: 362 DYLAELTLVDYSFLNFLPSVIAASSVFLARWTLDQTSHPWSPTLEHYSSYKASDLKTTVL 421 Query: 517 ALQNLQMNYSGCPLNAIRDKYRQEKFKSVAALSSPEVFQMLF 392 ALQ LQ+N GCPLNAIR KYRQ KFKSVAALSSP++ + LF Sbjct: 422 ALQGLQLNTKGCPLNAIRMKYRQPKFKSVAALSSPKLLETLF 463 >ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|297743331|emb|CBI36198.3| unnamed protein product [Vitis vinifera] Length = 490 Score = 221 bits (562), Expect = 2e-55 Identities = 109/162 (67%), Positives = 129/162 (79%) Frame = -1 Query: 877 FCFITDNTYARMEVLEMESKVLNNLEFQISTPTIKTFVRRFLRAAQASYKAPSVXXXXXX 698 FC ITDNTY+R EV++MES+VLN F+I PT KTF+RRFLRAAQASYK PS+ Sbjct: 329 FCCITDNTYSRGEVVKMESQVLNYFGFKIFAPTAKTFLRRFLRAAQASYKNPSLELEYLG 388 Query: 697 XXXXXLTMVEYAFLKFLPSLVAASAIFLARWTLDQSSHPWNPTLEHYTSYKALDLNSTVS 518 LT+++Y LK+LPS++AASA+FLARWTLDQS HPWNPTLEHYT YKA DL + V Sbjct: 389 NYLAELTLIDYGCLKYLPSIIAASAVFLARWTLDQSGHPWNPTLEHYTRYKASDLKTAVF 448 Query: 517 ALQNLQMNYSGCPLNAIRDKYRQEKFKSVAALSSPEVFQMLF 392 ALQ+LQ+N SGCPLNAIR KYRQ KFKSVA+LSSP++ Q LF Sbjct: 449 ALQDLQLNTSGCPLNAIRGKYRQNKFKSVASLSSPKLLQTLF 490 >ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|222845390|gb|EEE82937.1| predicted protein [Populus trichocarpa] Length = 482 Score = 220 bits (560), Expect = 4e-55 Identities = 109/162 (67%), Positives = 130/162 (80%) Frame = -1 Query: 877 FCFITDNTYARMEVLEMESKVLNNLEFQISTPTIKTFVRRFLRAAQASYKAPSVXXXXXX 698 FCFITDNTY EVL ME++VLN FQI PT KTF+RRFLRAAQASYK+PS Sbjct: 321 FCFITDNTYTSHEVLRMETQVLNFFGFQIFAPTAKTFLRRFLRAAQASYKSPSYELEYLA 380 Query: 697 XXXXXLTMVEYAFLKFLPSLVAASAIFLARWTLDQSSHPWNPTLEHYTSYKALDLNSTVS 518 LT+V+Y+FL FLPS++AAS++FLARWTLDQ+SHPW+PTLE YTSYKA DL +TV Sbjct: 381 DYLAELTLVDYSFLNFLPSVIAASSVFLARWTLDQTSHPWSPTLEKYTSYKASDLKTTVL 440 Query: 517 ALQNLQMNYSGCPLNAIRDKYRQEKFKSVAALSSPEVFQMLF 392 A+Q+LQ+N SGCPLNAIR KYRQ KFKSV+ALSSP++ + LF Sbjct: 441 AMQDLQLNTSGCPLNAIRMKYRQPKFKSVSALSSPKLLETLF 482 >dbj|BAA09367.1| A-type cyclin [Nicotiana tabacum] Length = 493 Score = 220 bits (560), Expect = 4e-55 Identities = 108/162 (66%), Positives = 129/162 (79%) Frame = -1 Query: 877 FCFITDNTYARMEVLEMESKVLNNLEFQISTPTIKTFVRRFLRAAQASYKAPSVXXXXXX 698 FCFITDNTY++ EV++MES+VLN L FQ+++PT K F+RRF++AAQASYK PSV Sbjct: 332 FCFITDNTYSKEEVIKMESRVLNLLSFQLASPTTKKFLRRFIQAAQASYKVPSVELEFMA 391 Query: 697 XXXXXLTMVEYAFLKFLPSLVAASAIFLARWTLDQSSHPWNPTLEHYTSYKALDLNSTVS 518 LT+V+Y FLKFLPSL AASA+FLARWTLDQS+HPWNPTLEHYT YK +L +TV Sbjct: 392 NYLAELTLVDYGFLKFLPSLTAASAVFLARWTLDQSNHPWNPTLEHYTRYKVSELRTTVF 451 Query: 517 ALQNLQMNYSGCPLNAIRDKYRQEKFKSVAALSSPEVFQMLF 392 ALQ LQMN SGC LNAIR+KYRQ KFKSVA L++ + Q LF Sbjct: 452 ALQELQMNTSGCTLNAIREKYRQPKFKSVATLAASKPVQSLF 493 >ref|XP_002890110.1| CYCA2_3 [Arabidopsis lyrata subsp. lyrata] gi|297335952|gb|EFH66369.1| CYCA2_3 [Arabidopsis lyrata subsp. lyrata] Length = 450 Score = 218 bits (554), Expect = 2e-54 Identities = 106/162 (65%), Positives = 130/162 (80%) Frame = -1 Query: 877 FCFITDNTYARMEVLEMESKVLNNLEFQISTPTIKTFVRRFLRAAQASYKAPSVXXXXXX 698 FCFITDNTY R +VLEME++VL + FQI TPT KTF+RRFLRAA AS+ +PS+ Sbjct: 289 FCFITDNTYTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAHASHLSPSLEVEFLA 348 Query: 697 XXXXXLTMVEYAFLKFLPSLVAASAIFLARWTLDQSSHPWNPTLEHYTSYKALDLNSTVS 518 LT+++Y FLKFLPS+VAASA+FLA+WT+DQS+HPWNPTLEHYT+YKA DL ++V Sbjct: 349 SYLTELTLIDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHYTTYKASDLKASVH 408 Query: 517 ALQNLQMNYSGCPLNAIRDKYRQEKFKSVAALSSPEVFQMLF 392 ALQ+LQ+N GCPL AIR KYRQEKFKSVA L+SP++ LF Sbjct: 409 ALQDLQLNTKGCPLTAIRMKYRQEKFKSVAILTSPKLLDTLF 450