BLASTX nr result
ID: Coptis24_contig00008048
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008048 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283746.1| PREDICTED: uncharacterized protein LOC100260... 179 2e-43 ref|XP_002532850.1| nucleic acid binding protein, putative [Rici... 179 3e-43 gb|AEW69816.1| Hop-interacting protein THI119 [Solanum lycopersi... 175 3e-42 ref|XP_002326700.1| predicted protein [Populus trichocarpa] gi|2... 172 3e-41 ref|XP_004143115.1| PREDICTED: CAX-interacting protein 4-like [C... 171 4e-41 >ref|XP_002283746.1| PREDICTED: uncharacterized protein LOC100260322 [Vitis vinifera] Length = 328 Score = 179 bits (455), Expect = 2e-43 Identities = 95/139 (68%), Positives = 101/139 (72%), Gaps = 2/139 (1%) Frame = +1 Query: 28 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD++K SS Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDAKNSSQPKSSNSEPEAE 60 Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387 YASFQGLLALARITGSNADE RGACKKCGRVGHLTFQCR Sbjct: 61 NA-------------------YASFQGLLALARITGSNADETRGACKKCGRVGHLTFQCR 101 Query: 388 NFLSLKED--KDPAAIEAA 438 NFLS+K+D KDP AI+A+ Sbjct: 102 NFLSIKDDKEKDPDAIQAS 120 >ref|XP_002532850.1| nucleic acid binding protein, putative [Ricinus communis] gi|223527387|gb|EEF29528.1| nucleic acid binding protein, putative [Ricinus communis] Length = 321 Score = 179 bits (453), Expect = 3e-43 Identities = 95/140 (67%), Positives = 101/140 (72%), Gaps = 3/140 (2%) Frame = +1 Query: 28 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD++K SS Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDAKSSSQQKSTSNNASEP 60 Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387 YASFQGLLALARITGSNADEARGACK+CGRVGHL FQCR Sbjct: 61 EAENA----------------YASFQGLLALARITGSNADEARGACKRCGRVGHLAFQCR 104 Query: 388 NFLSLKED---KDPAAIEAA 438 NFLS+K+D KDP AI+AA Sbjct: 105 NFLSIKDDSKEKDPDAIQAA 124 >gb|AEW69816.1| Hop-interacting protein THI119 [Solanum lycopersicum] Length = 327 Score = 175 bits (444), Expect = 3e-42 Identities = 94/140 (67%), Positives = 100/140 (71%), Gaps = 3/140 (2%) Frame = +1 Query: 28 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP+KDE K+SS Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPSKDEDKKSSNQKPSSAADPEN 60 Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387 YASFQGLLALARITGSNADE RGACK+CGRVGHLTFQCR Sbjct: 61 A--------------------YASFQGLLALARITGSNADETRGACKRCGRVGHLTFQCR 100 Query: 388 NFLSLKE---DKDPAAIEAA 438 NF+S+K+ DKD AIEAA Sbjct: 101 NFVSVKDDNKDKDAEAIEAA 120 >ref|XP_002326700.1| predicted protein [Populus trichocarpa] gi|222834022|gb|EEE72499.1| predicted protein [Populus trichocarpa] Length = 320 Score = 172 bits (435), Expect = 3e-41 Identities = 91/140 (65%), Positives = 100/140 (71%), Gaps = 3/140 (2%) Frame = +1 Query: 28 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD+SK+SS Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSKKSS------------ 48 Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387 YASFQGLLALARIT SNADEARGACK+CGRVGHL FQCR Sbjct: 49 -------QEKSSTAEPEGENAYASFQGLLALARITSSNADEARGACKRCGRVGHLAFQCR 101 Query: 388 NFLSLKE---DKDPAAIEAA 438 NF+S+K+ +KD A++AA Sbjct: 102 NFVSVKDGDKEKDAEAVQAA 121 >ref|XP_004143115.1| PREDICTED: CAX-interacting protein 4-like [Cucumis sativus] gi|449527701|ref|XP_004170848.1| PREDICTED: CAX-interacting protein 4-like [Cucumis sativus] Length = 310 Score = 171 bits (434), Expect = 4e-41 Identities = 90/138 (65%), Positives = 99/138 (71%), Gaps = 2/138 (1%) Frame = +1 Query: 28 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD++K ++ Sbjct: 1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNAAQQNTASSEPDAE 60 Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387 YASFQGLLALARITGSNA+E RGACK+CGRVGHL+FQCR Sbjct: 61 NA-------------------YASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCR 101 Query: 388 NFLSLKED--KDPAAIEA 435 NFLS+K D KDP AI+A Sbjct: 102 NFLSVKNDKEKDPEAIQA 119