BLASTX nr result

ID: Coptis24_contig00008048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008048
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283746.1| PREDICTED: uncharacterized protein LOC100260...   179   2e-43
ref|XP_002532850.1| nucleic acid binding protein, putative [Rici...   179   3e-43
gb|AEW69816.1| Hop-interacting protein THI119 [Solanum lycopersi...   175   3e-42
ref|XP_002326700.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_004143115.1| PREDICTED: CAX-interacting protein 4-like [C...   171   4e-41

>ref|XP_002283746.1| PREDICTED: uncharacterized protein LOC100260322 [Vitis vinifera]
          Length = 328

 Score =  179 bits (455), Expect = 2e-43
 Identities = 95/139 (68%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
 Frame = +1

Query: 28  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD++K SS            
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDAKNSSQPKSSNSEPEAE 60

Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387
                                YASFQGLLALARITGSNADE RGACKKCGRVGHLTFQCR
Sbjct: 61  NA-------------------YASFQGLLALARITGSNADETRGACKKCGRVGHLTFQCR 101

Query: 388 NFLSLKED--KDPAAIEAA 438
           NFLS+K+D  KDP AI+A+
Sbjct: 102 NFLSIKDDKEKDPDAIQAS 120


>ref|XP_002532850.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527387|gb|EEF29528.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 321

 Score =  179 bits (453), Expect = 3e-43
 Identities = 95/140 (67%), Positives = 101/140 (72%), Gaps = 3/140 (2%)
 Frame = +1

Query: 28  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD++K SS            
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDAKSSSQQKSTSNNASEP 60

Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387
                                YASFQGLLALARITGSNADEARGACK+CGRVGHL FQCR
Sbjct: 61  EAENA----------------YASFQGLLALARITGSNADEARGACKRCGRVGHLAFQCR 104

Query: 388 NFLSLKED---KDPAAIEAA 438
           NFLS+K+D   KDP AI+AA
Sbjct: 105 NFLSIKDDSKEKDPDAIQAA 124


>gb|AEW69816.1| Hop-interacting protein THI119 [Solanum lycopersicum]
          Length = 327

 Score =  175 bits (444), Expect = 3e-42
 Identities = 94/140 (67%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
 Frame = +1

Query: 28  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP+KDE K+SS            
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPSKDEDKKSSNQKPSSAADPEN 60

Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387
                                YASFQGLLALARITGSNADE RGACK+CGRVGHLTFQCR
Sbjct: 61  A--------------------YASFQGLLALARITGSNADETRGACKRCGRVGHLTFQCR 100

Query: 388 NFLSLKE---DKDPAAIEAA 438
           NF+S+K+   DKD  AIEAA
Sbjct: 101 NFVSVKDDNKDKDAEAIEAA 120


>ref|XP_002326700.1| predicted protein [Populus trichocarpa] gi|222834022|gb|EEE72499.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  172 bits (435), Expect = 3e-41
 Identities = 91/140 (65%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
 Frame = +1

Query: 28  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD+SK+SS            
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSKKSS------------ 48

Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387
                                YASFQGLLALARIT SNADEARGACK+CGRVGHL FQCR
Sbjct: 49  -------QEKSSTAEPEGENAYASFQGLLALARITSSNADEARGACKRCGRVGHLAFQCR 101

Query: 388 NFLSLKE---DKDPAAIEAA 438
           NF+S+K+   +KD  A++AA
Sbjct: 102 NFVSVKDGDKEKDAEAVQAA 121


>ref|XP_004143115.1| PREDICTED: CAX-interacting protein 4-like [Cucumis sativus]
           gi|449527701|ref|XP_004170848.1| PREDICTED:
           CAX-interacting protein 4-like [Cucumis sativus]
          Length = 310

 Score =  171 bits (434), Expect = 4e-41
 Identities = 90/138 (65%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
 Frame = +1

Query: 28  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDESKQSSXXXXXXXXXXXX 207
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKD++K ++            
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNAAQQNTASSEPDAE 60

Query: 208 XXXXXXXXXXXXXXXXXXXXXYASFQGLLALARITGSNADEARGACKKCGRVGHLTFQCR 387
                                YASFQGLLALARITGSNA+E RGACK+CGRVGHL+FQCR
Sbjct: 61  NA-------------------YASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCR 101

Query: 388 NFLSLKED--KDPAAIEA 435
           NFLS+K D  KDP AI+A
Sbjct: 102 NFLSVKNDKEKDPEAIQA 119


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