BLASTX nr result
ID: Coptis24_contig00008044
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008044 (606 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284270.1| PREDICTED: mitochondrial import inner membra... 130 1e-28 ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|1... 130 2e-28 ref|XP_004138031.1| PREDICTED: mitochondrial import inner membra... 129 3e-28 gb|ADB02902.1| mitochondrial import inner membrane translocase s... 129 3e-28 gb|ADW66158.1| mitochondrial import inner membrane translocase s... 128 7e-28 >ref|XP_002284270.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim8 [Vitis vinifera] gi|297734470|emb|CBI15717.3| unnamed protein product [Vitis vinifera] Length = 77 Score = 130 bits (328), Expect = 1e-28 Identities = 60/73 (82%), Positives = 68/73 (93%) Frame = +1 Query: 85 SALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCAQRY 264 S+LNSAELQHF+ QEK++AMV EMV KLT VCWDKCIT TPGSKFSSSE+TCLSNCAQRY Sbjct: 3 SSLNSAELQHFISQEKEKAMVNEMVAKLTTVCWDKCITSTPGSKFSSSESTCLSNCAQRY 62 Query: 265 MDMTIMIMKRFQS 303 MDM+++IMKRFQS Sbjct: 63 MDMSLIIMKRFQS 75 >ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|118483366|gb|ABK93584.1| unknown [Populus trichocarpa] gi|222869279|gb|EEF06410.1| predicted protein [Populus trichocarpa] Length = 78 Score = 130 bits (327), Expect = 2e-28 Identities = 59/76 (77%), Positives = 70/76 (92%) Frame = +1 Query: 76 MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255 MDPS++NSAEL+ FL+QEK+RAMV EMV KLT CWDKCIT +PGSKFSSSE++CLSNCA Sbjct: 1 MDPSSVNSAELERFLNQEKERAMVNEMVAKLTSACWDKCITSSPGSKFSSSESSCLSNCA 60 Query: 256 QRYMDMTIMIMKRFQS 303 QRYMDM+++IMKRFQS Sbjct: 61 QRYMDMSLIIMKRFQS 76 >ref|XP_004138031.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim8-like [Cucumis sativus] gi|449532151|ref|XP_004173046.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim8-like [Cucumis sativus] Length = 77 Score = 129 bits (325), Expect = 3e-28 Identities = 60/76 (78%), Positives = 69/76 (90%) Frame = +1 Query: 76 MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255 MD S+LNS EL +F+++EKQRAMV EMV KLT VCWDKCITGTPGSKFSSSE+ CLSNCA Sbjct: 1 MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60 Query: 256 QRYMDMTIMIMKRFQS 303 QRYMDM+I+IMKRFQ+ Sbjct: 61 QRYMDMSIIIMKRFQN 76 >gb|ADB02902.1| mitochondrial import inner membrane translocase subunit Tim8/small zinc finger-like protein [Jatropha curcas] Length = 78 Score = 129 bits (325), Expect = 3e-28 Identities = 59/76 (77%), Positives = 68/76 (89%) Frame = +1 Query: 76 MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255 MDPS LN+AE+Q FL+QEK++AMV EMV KLT CWDKCIT TPGSKFSSSE+ CLSNCA Sbjct: 1 MDPSTLNNAEMQQFLNQEKEKAMVNEMVAKLTSECWDKCITSTPGSKFSSSESACLSNCA 60 Query: 256 QRYMDMTIMIMKRFQS 303 QRYMDM+++IMKRFQS Sbjct: 61 QRYMDMSLIIMKRFQS 76 >gb|ADW66158.1| mitochondrial import inner membrane translocase subunit [Solanum nigrum] Length = 78 Score = 128 bits (322), Expect = 7e-28 Identities = 57/76 (75%), Positives = 71/76 (93%) Frame = +1 Query: 76 MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255 MDPSAL S ELQ+FL+QEK+RA++ EMVGKLT CWDKCITGTPGSKFSSSE++CL+NCA Sbjct: 1 MDPSALQSPELQNFLNQEKERALINEMVGKLTSSCWDKCITGTPGSKFSSSESSCLTNCA 60 Query: 256 QRYMDMTIMIMKRFQS 303 QRYM+M+++I+KRFQ+ Sbjct: 61 QRYMEMSLIIVKRFQN 76