BLASTX nr result

ID: Coptis24_contig00008044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008044
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284270.1| PREDICTED: mitochondrial import inner membra...   130   1e-28
ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|1...   130   2e-28
ref|XP_004138031.1| PREDICTED: mitochondrial import inner membra...   129   3e-28
gb|ADB02902.1| mitochondrial import inner membrane translocase s...   129   3e-28
gb|ADW66158.1| mitochondrial import inner membrane translocase s...   128   7e-28

>ref|XP_002284270.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim8 [Vitis vinifera] gi|297734470|emb|CBI15717.3|
           unnamed protein product [Vitis vinifera]
          Length = 77

 Score =  130 bits (328), Expect = 1e-28
 Identities = 60/73 (82%), Positives = 68/73 (93%)
 Frame = +1

Query: 85  SALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCAQRY 264
           S+LNSAELQHF+ QEK++AMV EMV KLT VCWDKCIT TPGSKFSSSE+TCLSNCAQRY
Sbjct: 3   SSLNSAELQHFISQEKEKAMVNEMVAKLTTVCWDKCITSTPGSKFSSSESTCLSNCAQRY 62

Query: 265 MDMTIMIMKRFQS 303
           MDM+++IMKRFQS
Sbjct: 63  MDMSLIIMKRFQS 75


>ref|XP_002322283.1| predicted protein [Populus trichocarpa] gi|118483366|gb|ABK93584.1|
           unknown [Populus trichocarpa]
           gi|222869279|gb|EEF06410.1| predicted protein [Populus
           trichocarpa]
          Length = 78

 Score =  130 bits (327), Expect = 2e-28
 Identities = 59/76 (77%), Positives = 70/76 (92%)
 Frame = +1

Query: 76  MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255
           MDPS++NSAEL+ FL+QEK+RAMV EMV KLT  CWDKCIT +PGSKFSSSE++CLSNCA
Sbjct: 1   MDPSSVNSAELERFLNQEKERAMVNEMVAKLTSACWDKCITSSPGSKFSSSESSCLSNCA 60

Query: 256 QRYMDMTIMIMKRFQS 303
           QRYMDM+++IMKRFQS
Sbjct: 61  QRYMDMSLIIMKRFQS 76


>ref|XP_004138031.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim8-like [Cucumis sativus]
           gi|449532151|ref|XP_004173046.1| PREDICTED:
           mitochondrial import inner membrane translocase subunit
           Tim8-like [Cucumis sativus]
          Length = 77

 Score =  129 bits (325), Expect = 3e-28
 Identities = 60/76 (78%), Positives = 69/76 (90%)
 Frame = +1

Query: 76  MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255
           MD S+LNS EL +F+++EKQRAMV EMV KLT VCWDKCITGTPGSKFSSSE+ CLSNCA
Sbjct: 1   MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 256 QRYMDMTIMIMKRFQS 303
           QRYMDM+I+IMKRFQ+
Sbjct: 61  QRYMDMSIIIMKRFQN 76


>gb|ADB02902.1| mitochondrial import inner membrane translocase subunit Tim8/small
           zinc finger-like protein [Jatropha curcas]
          Length = 78

 Score =  129 bits (325), Expect = 3e-28
 Identities = 59/76 (77%), Positives = 68/76 (89%)
 Frame = +1

Query: 76  MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255
           MDPS LN+AE+Q FL+QEK++AMV EMV KLT  CWDKCIT TPGSKFSSSE+ CLSNCA
Sbjct: 1   MDPSTLNNAEMQQFLNQEKEKAMVNEMVAKLTSECWDKCITSTPGSKFSSSESACLSNCA 60

Query: 256 QRYMDMTIMIMKRFQS 303
           QRYMDM+++IMKRFQS
Sbjct: 61  QRYMDMSLIIMKRFQS 76


>gb|ADW66158.1| mitochondrial import inner membrane translocase subunit [Solanum
           nigrum]
          Length = 78

 Score =  128 bits (322), Expect = 7e-28
 Identities = 57/76 (75%), Positives = 71/76 (93%)
 Frame = +1

Query: 76  MDPSALNSAELQHFLDQEKQRAMVQEMVGKLTDVCWDKCITGTPGSKFSSSEATCLSNCA 255
           MDPSAL S ELQ+FL+QEK+RA++ EMVGKLT  CWDKCITGTPGSKFSSSE++CL+NCA
Sbjct: 1   MDPSALQSPELQNFLNQEKERALINEMVGKLTSSCWDKCITGTPGSKFSSSESSCLTNCA 60

Query: 256 QRYMDMTIMIMKRFQS 303
           QRYM+M+++I+KRFQ+
Sbjct: 61  QRYMEMSLIIVKRFQN 76


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