BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008035
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. l...   120   9e-26
emb|CAB86020.1| putative protein [Arabidopsis thaliana] gi|97584...   120   1e-25
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ...   120   1e-25

>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 2/108 (1%)
 Frame = -2

Query: 394 VSEGKEFFNLMRQTYGMSPGLKHYACVIDLLGRAGFVGEAWDMIEGMPFEPDTNIWRSLL 215
           V EGK FF+LM Q YG+ P LKHY C++DLLGRAGF+  A+D I+ MP  PD +IW +LL
Sbjct: 594 VDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652

Query: 214 SACKIKGNVNVAEYACNQLMELDYDNTDYQVLLANIYA--GKWNEVSK 77
            AC+I GN+ + ++A ++L E+D +N  Y VLL+NIYA  GKW  V K
Sbjct: 653 GACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDK 700


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/108 (54%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
 Frame = -2

Query: 394 VSEGKEFFNLMRQTYGMSPGLKHYACVIDLLGRAGFVGEAWDMIEGMPFEPDTNIWRSLL 215
           V EG+ FFN MR  YG+ PG KHYAC++D+LGRAG + EA ++IE MP  P  ++W +LL
Sbjct: 482 VDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALL 541

Query: 214 SACKIKGNVNVAEYACNQLMELDYDNTDYQVLLANIY--AGKWNEVSK 77
            AC+I GNV +AE AC++L+E D +N    VLL+NIY  AGKW+ VS+
Sbjct: 542 GACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSR 589


>ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 637

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/108 (49%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = -2

Query: 394 VSEGKEFFNLMRQTYGMSPGLKHYACVIDLLGRAGFVGEAWDMIEGMPFEPDTNIWRSLL 215
           V EG+ FF LMR TYG+SP + HY+C++D+LGRAG + EA+++I+ +PFEP  +IW SLL
Sbjct: 382 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLL 441

Query: 214 SACKIKGNVNVAEYACNQLMELDYDNTDYQVLLANIYAG--KWNEVSK 77
           ++C++  N+ +AE A  +L EL+ +N    VLL+NIYA   +W E++K
Sbjct: 442 ASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAK 489


>emb|CAB86020.1| putative protein [Arabidopsis thaliana] gi|9758453|dbj|BAB08982.1|
           selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  120 bits (300), Expect = 1e-25
 Identities = 52/108 (48%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = -2

Query: 394 VSEGKEFFNLMRQTYGMSPGLKHYACVIDLLGRAGFVGEAWDMIEGMPFEPDTNIWRSLL 215
           V EG+ FF LMR TYG+SP + HY+C++D+LGRAG + EA+++I+ +PF+P  +IW SLL
Sbjct: 372 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 431

Query: 214 SACKIKGNVNVAEYACNQLMELDYDNTDYQVLLANIYAG--KWNEVSK 77
           ++C++  N+ +AE A  +L EL+ +N    VLL+NIYA   +W E++K
Sbjct: 432 ASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAK 479


>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499957|gb|AES81160.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  120 bits (300), Expect = 1e-25
 Identities = 53/108 (49%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
 Frame = -2

Query: 394 VSEGKEFFNLMRQTYGMSPGLKHYACVIDLLGRAGFVGEAWDMIEGMPFEPDTNIWRSLL 215
           V EG++ F++M++ YG+ P LKHY C++DLLGRAG++ +A++++  MP +PD +IW +LL
Sbjct: 543 VDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALL 602

Query: 214 SACKIKGNVNVAEYACNQLMELDYDNTDYQVLLANIYAG--KWNEVSK 77
           SACKI GN  +   A ++L+E+D +N  Y VLL+NIYA   KW  V K
Sbjct: 603 SACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650