BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008034
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141860.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   196   4e-48
ref|XP_003562801.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   195   1e-47
ref|XP_002265704.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   195   1e-47
ref|NP_001060126.1| Os07g0585800 [Oryza sativa Japonica Group] g...   193   5e-47
dbj|BAK01929.1| predicted protein [Hordeum vulgare subsp. vulgare]    192   6e-47

>ref|XP_004141860.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like isoform 1 [Cucumis sativus]
           gi|449499860|ref|XP_004160936.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like [Cucumis sativus]
          Length = 156

 Score =  196 bits (499), Expect = 4e-48
 Identities = 103/178 (57%), Positives = 120/178 (67%)
 Frame = -1

Query: 827 NTLQRCVNNSARILRSELLSSSKTFCSGALEECKXXXXXXXXXXXXEHLRRKVVIYSPAX 648
           N+LQR + +  R LR  L   S++F + +L E K            EHL R+VVIYS   
Sbjct: 3   NSLQR-IWSHGRALRGTLAPLSRSFSTDSLVEMKPGEIGVVSGIPEEHLTRRVVIYS--- 58

Query: 647 XXXXXXXXXXXXXXXXVVIYSPARTATQQGSGKVGKWKINFVSTQKWENPLMGWTSTGDP 468
                                PARTA+QQGSGKVGKWKINFVSTQKWENPLMGWTSTGDP
Sbjct: 59  ---------------------PARTASQQGSGKVGKWKINFVSTQKWENPLMGWTSTGDP 97

Query: 467 YANVGDAGLSFESEEAAKQFAEKYGWDYVVRKRHTPLLTVKSYAENFKWKGPPKTEEE 294
           YANVGD+ LSF+SEEAAK FAEK+GW+YVV+KRHTPLL  K+YA+NFKWKGPP   +E
Sbjct: 98  YANVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKAKAYADNFKWKGPPAAAKE 155


>ref|XP_003562801.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial-like [Brachypodium distachyon]
          Length = 158

 Score =  195 bits (496), Expect = 1e-47
 Identities = 88/101 (87%), Positives = 97/101 (96%)
 Frame = -1

Query: 599 VVIYSPARTATQQGSGKVGKWKINFVSTQKWENPLMGWTSTGDPYANVGDAGLSFESEEA 420
           VVIYSPARTA+QQGSGKVG+WKINFVSTQKWENPLMGWTSTGDPYANVG+AGL+F+S ++
Sbjct: 56  VVIYSPARTASQQGSGKVGRWKINFVSTQKWENPLMGWTSTGDPYANVGEAGLTFDSADS 115

Query: 419 AKQFAEKYGWDYVVRKRHTPLLTVKSYAENFKWKGPPKTEE 297
           AK FAEK+GWDYVVRKRHTPLL  K+YAENFKWKGPPKTEE
Sbjct: 116 AKAFAEKHGWDYVVRKRHTPLLKPKTYAENFKWKGPPKTEE 156


>ref|XP_002265704.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
           mitochondrial [Vitis vinifera]
           gi|147858131|emb|CAN83933.1| hypothetical protein
           VITISV_035766 [Vitis vinifera]
          Length = 154

 Score =  195 bits (495), Expect = 1e-47
 Identities = 99/164 (60%), Positives = 112/164 (68%)
 Frame = -1

Query: 788 LRSELLSSSKTFCSGALEECKXXXXXXXXXXXXEHLRRKVVIYSPAXXXXXXXXXXXXXX 609
           LRS     S+ F + AL E K            EHLRR+VVI+SP               
Sbjct: 15  LRSAFAPMSRPFSADALVEIKPGEIGMVSGIPEEHLRRRVVIFSP--------------- 59

Query: 608 XXXVVIYSPARTATQQGSGKVGKWKINFVSTQKWENPLMGWTSTGDPYANVGDAGLSFES 429
                    ARTATQQGSGKVG+WKINF+STQKWENPLMGWTSTGDPYANVGDAGL F+S
Sbjct: 60  ---------ARTATQQGSGKVGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLGFDS 110

Query: 428 EEAAKQFAEKYGWDYVVRKRHTPLLTVKSYAENFKWKGPPKTEE 297
           EEAAK FAEK+GW+Y V+KR TPLL  K+YA+NFKWKGPPKTE+
Sbjct: 111 EEAAKAFAEKHGWEYTVKKRQTPLLKTKAYADNFKWKGPPKTED 154


>ref|NP_001060126.1| Os07g0585800 [Oryza sativa Japonica Group]
           gi|50509945|dbj|BAD30267.1| NADH-ubiquinone
           oxidoreductase-related-like protein [Oryza sativa
           Japonica Group] gi|113611662|dbj|BAF22040.1|
           Os07g0585800 [Oryza sativa Japonica Group]
           gi|218199922|gb|EEC82349.1| hypothetical protein
           OsI_26657 [Oryza sativa Indica Group]
           gi|222637356|gb|EEE67488.1| hypothetical protein
           OsJ_24916 [Oryza sativa Japonica Group]
          Length = 159

 Score =  193 bits (490), Expect = 5e-47
 Identities = 86/101 (85%), Positives = 96/101 (95%)
 Frame = -1

Query: 599 VVIYSPARTATQQGSGKVGKWKINFVSTQKWENPLMGWTSTGDPYANVGDAGLSFESEEA 420
           VVIYSPARTA+QQGSGKVG+WKINFVSTQKWENPLMGWTSTGDPYANVG+AGL+F+S ++
Sbjct: 58  VVIYSPARTASQQGSGKVGRWKINFVSTQKWENPLMGWTSTGDPYANVGEAGLTFDSADS 117

Query: 419 AKQFAEKYGWDYVVRKRHTPLLTVKSYAENFKWKGPPKTEE 297
           AK FAEK+GWDYVVRKRHTPLL  KSYAENFKW+GPPK E+
Sbjct: 118 AKAFAEKHGWDYVVRKRHTPLLKAKSYAENFKWRGPPKAEQ 158


>dbj|BAK01929.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 158

 Score =  192 bits (489), Expect = 6e-47
 Identities = 86/101 (85%), Positives = 97/101 (96%)
 Frame = -1

Query: 599 VVIYSPARTATQQGSGKVGKWKINFVSTQKWENPLMGWTSTGDPYANVGDAGLSFESEEA 420
           V+IYSPARTA+QQGSGKVG+WKINFVSTQKWENPLMGWTSTGDPYANVG+AGL+F+S E+
Sbjct: 56  VLIYSPARTASQQGSGKVGRWKINFVSTQKWENPLMGWTSTGDPYANVGEAGLTFDSAES 115

Query: 419 AKQFAEKYGWDYVVRKRHTPLLTVKSYAENFKWKGPPKTEE 297
           AK FA+K+GW+YVVRKRHTPLL  K+YAENFKWKGPPKTEE
Sbjct: 116 AKAFADKHGWEYVVRKRHTPLLKPKTYAENFKWKGPPKTEE 156