BLASTX nr result
ID: Coptis24_contig00008032
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008032 (446 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat... 235 2e-60 ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat... 232 3e-59 ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2... 228 4e-58 ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat... 228 5e-58 ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group] g... 223 1e-56 >ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] Length = 743 Score = 235 bits (600), Expect = 2e-60 Identities = 113/148 (76%), Positives = 129/148 (87%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F+EM I+DEVSWTALVSGYAQFGKAN+TI LFE ML + + PDGVTF+GVLSACSRAGLV Sbjct: 429 FHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLV 488 Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361 EKG YF+ M+KEH I PI DH+TCMIDLLS AGRL+EAK FI +MPF PDAIGWATLLS Sbjct: 489 EKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLS 548 Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445 SCRL+ N+EIG+WAA+SL K+EP NPAS Sbjct: 549 SCRLNGNLEIGKWAAESLHKLEPQNPAS 576 Score = 59.3 bits (142), Expect = 3e-07 Identities = 33/120 (27%), Positives = 60/120 (50%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F +M K+ +SWTA++ GY Q G + + + +F M N++ PD T V+S+C+ + Sbjct: 328 FRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASL 387 Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361 E+G ++ + +I + +I L G L+ A + M + D + W L+S Sbjct: 388 EEGAQFHGQALASGLICFV-TVSNALITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALVS 445 >ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera] Length = 743 Score = 232 bits (591), Expect = 3e-59 Identities = 111/148 (75%), Positives = 129/148 (87%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F EM+I+DEVSWTAL++GYAQFGKAN+TI LFERML + LKPDGVTFIGVLSACSRAGLV Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488 Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361 EKGL+YF+SMIKEH I+PI DH TC+IDLL AGRL+EA+ FI MP PD +GWATLLS Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548 Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445 SCR+H ++EIG+WAADSL +EP NPAS Sbjct: 549 SCRVHGDMEIGKWAADSLIALEPQNPAS 576 >ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa] Length = 743 Score = 228 bits (581), Expect = 4e-58 Identities = 107/147 (72%), Positives = 126/147 (85%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F+EM +DEVSWTALVSGYAQFGKAN+TIDLFERML LKPD VTFI VLSACSRAGLV Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV 488 Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361 E+G +YF+SM+K+H I+P DH+TCMIDL AGRL+EAK FI +MPF PD+IGWATLLS Sbjct: 489 ERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548 Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPA 442 SCRL+ N EIG+WAA+SL +++P NPA Sbjct: 549 SCRLYGNEEIGKWAAESLLELDPQNPA 575 Score = 58.5 bits (140), Expect = 5e-07 Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F M K+ VSWTA++ GY Q G + + + +F M N ++PD T V+S+C+ + Sbjct: 328 FKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASL 387 Query: 182 EKGLKYF-QSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLL 358 E+G ++ Q+++ ++ +I L G ++++ + M F+ D + W L+ Sbjct: 388 EEGAQFHCQALVSG--LISFITVSNALITLYGKCGSIEDSNQLFDEMSFR-DEVSWTALV 444 Query: 359 S 361 S Sbjct: 445 S 445 >ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Glycine max] Length = 747 Score = 228 bits (580), Expect = 5e-58 Identities = 109/148 (73%), Positives = 127/148 (85%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F+EM DEVSWTALVSGYAQFGKAN+T+ LFE ML + KPD VTFIGVLSACSRAGLV Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492 Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361 +KG + F+SMIKEH I+PI DH+TCMIDL S AGRL+EA++FI +MPF PDAIGWA+LLS Sbjct: 493 QKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552 Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445 SCR H N+EIG+WAA+SL K+EPHN AS Sbjct: 553 SCRFHRNMEIGKWAAESLLKLEPHNTAS 580 Score = 59.3 bits (142), Expect = 3e-07 Identities = 32/120 (26%), Positives = 62/120 (51%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F +M+ K+ VSWTA++ GY Q G + + + +F M +N ++PD T V+S+C+ + Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASL 391 Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361 E+G ++ + +I I ++ L G ++++ M + D + W L+S Sbjct: 392 EEGAQFHCRALVSGLISFI-TVSNALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTALVS 449 >ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group] gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like protein [Oryza sativa Japonica Group] gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group] gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group] Length = 751 Score = 223 bits (568), Expect = 1e-56 Identities = 107/148 (72%), Positives = 124/148 (83%) Frame = +2 Query: 2 FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181 F+EM D+VSWTALV+GYAQFGKA +TIDLFE+ML N LKPDGVTFIGVLSACSRAGLV Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496 Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361 EKG YF SM K+H IVPI DH+TCMIDL S +GR +EA+EFI +MP PDA GWATLLS Sbjct: 497 EKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556 Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445 SCRL N+EIG+WAA++L + +P NPAS Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPAS 584