BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008032
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   235   2e-60
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   232   3e-59
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   228   4e-58
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   228   5e-58
ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group] g...   223   1e-56

>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  235 bits (600), Expect = 2e-60
 Identities = 113/148 (76%), Positives = 129/148 (87%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F+EM I+DEVSWTALVSGYAQFGKAN+TI LFE ML + + PDGVTF+GVLSACSRAGLV
Sbjct: 429 FHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLV 488

Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361
           EKG  YF+ M+KEH I PI DH+TCMIDLLS AGRL+EAK FI +MPF PDAIGWATLLS
Sbjct: 489 EKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLS 548

Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445
           SCRL+ N+EIG+WAA+SL K+EP NPAS
Sbjct: 549 SCRLNGNLEIGKWAAESLHKLEPQNPAS 576



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/120 (27%), Positives = 60/120 (50%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F +M  K+ +SWTA++ GY Q G + + + +F  M  N++ PD  T   V+S+C+    +
Sbjct: 328 FRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASL 387

Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361
           E+G ++    +   +I  +      +I L    G L+ A +    M  + D + W  L+S
Sbjct: 388 EEGAQFHGQALASGLICFV-TVSNALITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALVS 445


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  232 bits (591), Expect = 3e-59
 Identities = 111/148 (75%), Positives = 129/148 (87%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F EM+I+DEVSWTAL++GYAQFGKAN+TI LFERML + LKPDGVTFIGVLSACSRAGLV
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488

Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361
           EKGL+YF+SMIKEH I+PI DH TC+IDLL  AGRL+EA+ FI  MP  PD +GWATLLS
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548

Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445
           SCR+H ++EIG+WAADSL  +EP NPAS
Sbjct: 549 SCRVHGDMEIGKWAADSLIALEPQNPAS 576


>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  228 bits (581), Expect = 4e-58
 Identities = 107/147 (72%), Positives = 126/147 (85%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F+EM  +DEVSWTALVSGYAQFGKAN+TIDLFERML   LKPD VTFI VLSACSRAGLV
Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV 488

Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361
           E+G +YF+SM+K+H I+P  DH+TCMIDL   AGRL+EAK FI +MPF PD+IGWATLLS
Sbjct: 489 ERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548

Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPA 442
           SCRL+ N EIG+WAA+SL +++P NPA
Sbjct: 549 SCRLYGNEEIGKWAAESLLELDPQNPA 575



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F  M  K+ VSWTA++ GY Q G + + + +F  M  N ++PD  T   V+S+C+    +
Sbjct: 328 FKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASL 387

Query: 182 EKGLKYF-QSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLL 358
           E+G ++  Q+++    ++        +I L    G ++++ +    M F+ D + W  L+
Sbjct: 388 EEGAQFHCQALVSG--LISFITVSNALITLYGKCGSIEDSNQLFDEMSFR-DEVSWTALV 444

Query: 359 S 361
           S
Sbjct: 445 S 445


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  228 bits (580), Expect = 5e-58
 Identities = 109/148 (73%), Positives = 127/148 (85%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F+EM   DEVSWTALVSGYAQFGKAN+T+ LFE ML +  KPD VTFIGVLSACSRAGLV
Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492

Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361
           +KG + F+SMIKEH I+PI DH+TCMIDL S AGRL+EA++FI +MPF PDAIGWA+LLS
Sbjct: 493 QKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552

Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445
           SCR H N+EIG+WAA+SL K+EPHN AS
Sbjct: 553 SCRFHRNMEIGKWAAESLLKLEPHNTAS 580



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/120 (26%), Positives = 62/120 (51%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F +M+ K+ VSWTA++ GY Q G + + + +F  M +N ++PD  T   V+S+C+    +
Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASL 391

Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361
           E+G ++    +   +I  I      ++ L    G ++++      M +  D + W  L+S
Sbjct: 392 EEGAQFHCRALVSGLISFI-TVSNALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTALVS 449


>ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
           gi|50252103|dbj|BAD28089.1| putative pentatricopeptide
           (PPR) repeat-containing protein-like protein [Oryza
           sativa Japonica Group] gi|113535158|dbj|BAF07541.1|
           Os02g0106300 [Oryza sativa Japonica Group]
           gi|215766741|dbj|BAG98969.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 751

 Score =  223 bits (568), Expect = 1e-56
 Identities = 107/148 (72%), Positives = 124/148 (83%)
 Frame = +2

Query: 2   FNEMHIKDEVSWTALVSGYAQFGKANQTIDLFERMLDNDLKPDGVTFIGVLSACSRAGLV 181
           F+EM   D+VSWTALV+GYAQFGKA +TIDLFE+ML N LKPDGVTFIGVLSACSRAGLV
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496

Query: 182 EKGLKYFQSMIKEHVIVPIHDHFTCMIDLLSCAGRLQEAKEFIGRMPFQPDAIGWATLLS 361
           EKG  YF SM K+H IVPI DH+TCMIDL S +GR +EA+EFI +MP  PDA GWATLLS
Sbjct: 497 EKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556

Query: 362 SCRLHCNVEIGEWAADSLAKVEPHNPAS 445
           SCRL  N+EIG+WAA++L + +P NPAS
Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPAS 584