BLASTX nr result

ID: Coptis24_contig00008029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008029
         (1922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana] ...   395   e-107
ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arab...   392   e-106
ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251...   380   e-103
ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|2...   379   e-102
ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265...   372   e-100

>ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana]
            gi|332658287|gb|AEE83687.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 289

 Score =  395 bits (1014), Expect = e-107
 Identities = 199/283 (70%), Positives = 229/283 (80%), Gaps = 4/283 (1%)
 Frame = +1

Query: 763  LSKLPFFLSTPTTQQFPSLKFKKSTHPTISMASS----DGLQSISITKTWTQLNNKSDFA 930
            L+ LPF  +  +T   P          T+S++SS    D  +SI       +L ++SDF 
Sbjct: 10   LTSLPFSFAFSST---PCKSRASPPRSTVSLSSSRRRQDRRRSIEAMSQVMELEDESDFE 66

Query: 931  SLLSSDGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAAPIFFQRGIANA 1110
             LLSSD  ISI GFGSLLSE+SARSTFP+L NFRIAKL GFRRVFAH+APIFF+RGIAN 
Sbjct: 67   KLLSSDNRISITGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAPIFFERGIANP 126

Query: 1111 ETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPETLEGRPFTNRAV 1290
            ET+EISSLSVEPCEGESLVVTVFEIK SEIP+FI RE EFRFLAVVPETLEG+P+TN AV
Sbjct: 127  ETKEISSLSVEPCEGESLVVTVFEIKSSEIPAFIGRELEFRFLAVVPETLEGKPYTNSAV 186

Query: 1291 LCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHCVLAARNLSDVA 1470
            LCGRYSDEE+FQ+RCKG++ +YF+ YG++ I KIWRDDILPCR+YLRHCVLAA+NL D A
Sbjct: 187  LCGRYSDEEFFQIRCKGNKGIYFQHYGRFKIDKIWRDDILPCRLYLRHCVLAAKNLGDEA 246

Query: 1471 YNNFLDHTFLGDRKTTIRQYLGMKGSGIMEEEPPETLKTRYGG 1599
            YNNFLDHTFLGDRKTTIR+YL   GSGIMEEEPPE LK+RYGG
Sbjct: 247  YNNFLDHTFLGDRKTTIREYLSSTGSGIMEEEPPEALKSRYGG 289


>ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arabidopsis lyrata subsp.
            lyrata] gi|297316023|gb|EFH46446.1| hypothetical protein
            ARALYDRAFT_493280 [Arabidopsis lyrata subsp. lyrata]
          Length = 297

 Score =  392 bits (1008), Expect = e-106
 Identities = 199/286 (69%), Positives = 228/286 (79%), Gaps = 7/286 (2%)
 Frame = +1

Query: 763  LSKLPFFLSTPTTQQFPSLKFKKSTHPTISMAS-SDGLQSISITKT------WTQLNNKS 921
            L+ LPF  +   T   P     +ST   IS     D  +SI             +L ++S
Sbjct: 12   LTSLPFSYALSPTTCKPRASPPRSTVSLISSRRRQDRRRSIEAVSRDIHGSDLLELEDES 71

Query: 922  DFASLLSSDGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAAPIFFQRGI 1101
            DF  LLSSD  ISI GFGSLLSE+SARSTFP+L NFRIAKL GFRRVFAH+APIFF+ GI
Sbjct: 72   DFEKLLSSDNRISIAGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAPIFFELGI 131

Query: 1102 ANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPETLEGRPFTN 1281
            AN ET+EISSLSVEPCEGESLVVTVFEIK SEIP+FI+RE EFRFLAVVPET+EG+P+TN
Sbjct: 132  ANPETKEISSLSVEPCEGESLVVTVFEIKSSEIPAFIQRELEFRFLAVVPETMEGKPYTN 191

Query: 1282 RAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHCVLAARNLS 1461
             AVLCGRYSDEE+FQ+RCKG++E+YF+ YG++NI KIWRDDILPCR+YLRHCVLAA+NL 
Sbjct: 192  SAVLCGRYSDEEFFQIRCKGNKEIYFQHYGRFNIEKIWRDDILPCRLYLRHCVLAAKNLG 251

Query: 1462 DVAYNNFLDHTFLGDRKTTIRQYLGMKGSGIMEEEPPETLKTRYGG 1599
            D AYNNFLDHTFLGDRKTTIR+YL   GSGIMEEEPPE LK+RYGG
Sbjct: 252  DEAYNNFLDHTFLGDRKTTIREYLSSTGSGIMEEEPPEALKSRYGG 297


>ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251759 [Vitis vinifera]
            gi|296083318|emb|CBI22954.3| unnamed protein product
            [Vitis vinifera]
          Length = 248

 Score =  380 bits (976), Expect = e-103
 Identities = 178/235 (75%), Positives = 209/235 (88%), Gaps = 3/235 (1%)
 Frame = +1

Query: 904  QLNNKSDFASLLSSDG---YISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHA 1074
            +L ++SDF  +LS DG    +S+CGFGSLLSE+SARSTFP+L+NFR+A+LN FRRVFAH 
Sbjct: 14   ELKDESDFEKVLSPDGGLGLLSVCGFGSLLSERSARSTFPDLMNFRVARLNSFRRVFAHV 73

Query: 1075 APIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPE 1254
            APIFF+RGIA  ET EISSLSVEPCEGE+L+VTVFEI+ SEIPSFI+REHEFRFLAV PE
Sbjct: 74   APIFFERGIAKPETMEISSLSVEPCEGETLIVTVFEIQRSEIPSFIKREHEFRFLAVFPE 133

Query: 1255 TLEGRPFTNRAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRH 1434
            TL+G+ FT  AVLC RYSDEE+FQ RCKGS+E+YF++YG++NIHKIWRDD+LPCR+YLRH
Sbjct: 134  TLDGKLFTTPAVLCARYSDEEFFQNRCKGSKEIYFQQYGRHNIHKIWRDDVLPCRVYLRH 193

Query: 1435 CVLAARNLSDVAYNNFLDHTFLGDRKTTIRQYLGMKGSGIMEEEPPETLKTRYGG 1599
            CVLAA+NLSD AYNNFLDHTFL DRKTTIR+YL   GSGIMEEEPPE+L+ RYGG
Sbjct: 194  CVLAAKNLSDAAYNNFLDHTFLADRKTTIREYLATTGSGIMEEEPPESLRARYGG 248


>ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|222864523|gb|EEF01654.1|
            predicted protein [Populus trichocarpa]
          Length = 245

 Score =  379 bits (972), Expect = e-102
 Identities = 181/234 (77%), Positives = 210/234 (89%), Gaps = 2/234 (0%)
 Frame = +1

Query: 904  QLNNKSDFASLLSSDG--YISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAA 1077
            +L + SDF S LSS     IS+CGFGSLLSE+SARSTFP+L+NFR+A+LNGFRRVFAH A
Sbjct: 12   ELRDDSDFRSFLSSSDSDLISVCGFGSLLSERSARSTFPDLLNFRVARLNGFRRVFAHVA 71

Query: 1078 PIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPET 1257
            PIFF+RGIA  ET+EISSLSVEPCEGE LVVTVFEI++SEIP+F+ERE EFRFLAVVPET
Sbjct: 72   PIFFERGIAKPETKEISSLSVEPCEGEGLVVTVFEIEKSEIPAFMERELEFRFLAVVPET 131

Query: 1258 LEGRPFTNRAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHC 1437
            L+G+PF   AVLC RYSDEE+FQVRCKGS+E+YF+ YG+YNI+KIWRDDILPCR YLRHC
Sbjct: 132  LDGKPFDFPAVLCARYSDEEFFQVRCKGSKEIYFQHYGRYNINKIWRDDILPCRAYLRHC 191

Query: 1438 VLAARNLSDVAYNNFLDHTFLGDRKTTIRQYLGMKGSGIMEEEPPETLKTRYGG 1599
            VLAA+NLSD A++NFL+HTFLGDRKTTIR+YL   G+GIMEEEPPE+LKTRYGG
Sbjct: 192  VLAAKNLSDAAHSNFLEHTFLGDRKTTIREYLATTGAGIMEEEPPESLKTRYGG 245


>ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265416 [Vitis vinifera]
            gi|296083319|emb|CBI22955.3| unnamed protein product
            [Vitis vinifera]
          Length = 308

 Score =  372 bits (956), Expect = e-100
 Identities = 174/234 (74%), Positives = 207/234 (88%), Gaps = 1/234 (0%)
 Frame = +1

Query: 901  TQLNNKSDFASLLSS-DGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAA 1077
            T+L+++SDF  L SS D  +SICGFGSLLSE+SARSTFP+LINFR+A+LNGFRRVFAH  
Sbjct: 75   TELHDESDFERLASSNDDLLSICGFGSLLSERSARSTFPDLINFRVARLNGFRRVFAHVT 134

Query: 1078 PIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPET 1257
            P+FF+RGIA  ET EIS LSVEPCEGESL+VTVFEI  SEIPS+I+RE E+RFLAV PET
Sbjct: 135  PVFFERGIAKPETMEISGLSVEPCEGESLIVTVFEIHRSEIPSYIKREIEYRFLAVFPET 194

Query: 1258 LEGRPFTNRAVLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRHC 1437
            L+G PFT+ AVLC RYSDEE+ Q+RCKGS+E++FE+YG+YNIHKIWRDD+ PCR+YLRHC
Sbjct: 195  LDGTPFTSPAVLCARYSDEEFLQIRCKGSKEMFFEQYGRYNIHKIWRDDVFPCRVYLRHC 254

Query: 1438 VLAARNLSDVAYNNFLDHTFLGDRKTTIRQYLGMKGSGIMEEEPPETLKTRYGG 1599
            +LAA++LSD AYN+FLDHTFL DRKTTI++YL   GSGIMEEEPPE+LK RYGG
Sbjct: 255  LLAAKSLSDAAYNDFLDHTFLADRKTTIQEYLATTGSGIMEEEPPESLKARYGG 308


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