BLASTX nr result

ID: Coptis24_contig00008021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008021
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21017.3| unnamed protein product [Vitis vinifera]              181   9e-44
emb|CAN81198.1| hypothetical protein VITISV_036369 [Vitis vinifera]   181   9e-44
ref|XP_002285025.2| PREDICTED: uncharacterized protein LOC100254...   174   1e-41
ref|XP_002308655.1| predicted protein [Populus trichocarpa] gi|2...   163   3e-38
ref|XP_003526417.1| PREDICTED: uncharacterized protein LOC100798...   160   2e-37

>emb|CBI21017.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  181 bits (460), Expect = 9e-44
 Identities = 100/161 (62%), Positives = 117/161 (72%), Gaps = 7/161 (4%)
 Frame = +3

Query: 3   GRRKTSIKSLAAELCLDRAVVXXXXXXXXXXXXXXXXXXXHRIVQTTLEPESKPVDP-SV 179
           GRRKTSIKSLAAELCLDRAVV                    + V T   PE++PV+   +
Sbjct: 179 GRRKTSIKSLAAELCLDRAVVLELLREPPPNLLLMSAALPDKPVPTITVPETEPVEAVPL 238

Query: 180 EFTKDVLEP----QPEVK--LSVHMMQSRWSMQKRLKKVQLETLERVYNRTKRPTNAMIS 341
           + T+  +E     +PEVK  + VH+MQSRWS QKRLKKVQ+ETLERVY RTKRPTNAMIS
Sbjct: 239 DTTRGAVEAAEPAEPEVKGKVPVHVMQSRWSAQKRLKKVQVETLERVYRRTKRPTNAMIS 298

Query: 342 SVVHVTNLPRKRVVKWFEDKRAEDGVPHNRLPYQPSTSESM 464
           S+VHVTNLPRKRVVKWFEDKR EDGVP +RLP+Q STSE++
Sbjct: 299 SIVHVTNLPRKRVVKWFEDKRTEDGVPEHRLPFQRSTSETV 339


>emb|CAN81198.1| hypothetical protein VITISV_036369 [Vitis vinifera]
          Length = 282

 Score =  181 bits (460), Expect = 9e-44
 Identities = 100/161 (62%), Positives = 117/161 (72%), Gaps = 7/161 (4%)
 Frame = +3

Query: 3   GRRKTSIKSLAAELCLDRAVVXXXXXXXXXXXXXXXXXXXHRIVQTTLEPESKPVDP-SV 179
           GRRKTSIKSLAAELCLDRAVV                    + V T   PE++PV+   +
Sbjct: 119 GRRKTSIKSLAAELCLDRAVVLELLREPPPNLLLMSAALPDKPVPTITVPETEPVEAVPL 178

Query: 180 EFTKDVLEP----QPEVK--LSVHMMQSRWSMQKRLKKVQLETLERVYNRTKRPTNAMIS 341
           + T+  +E     +PEVK  + VH+MQSRWS QKRLKKVQ+ETLERVY RTKRPTNAMIS
Sbjct: 179 DTTRGAVEAAEPAEPEVKGKVPVHVMQSRWSAQKRLKKVQVETLERVYRRTKRPTNAMIS 238

Query: 342 SVVHVTNLPRKRVVKWFEDKRAEDGVPHNRLPYQPSTSESM 464
           S+VHVTNLPRKRVVKWFEDKR EDGVP +RLP+Q STSE++
Sbjct: 239 SIVHVTNLPRKRVVKWFEDKRTEDGVPEHRLPFQRSTSETV 279


>ref|XP_002285025.2| PREDICTED: uncharacterized protein LOC100254226 [Vitis vinifera]
          Length = 402

 Score =  174 bits (442), Expect = 1e-41
 Identities = 96/154 (62%), Positives = 111/154 (72%), Gaps = 7/154 (4%)
 Frame = +3

Query: 3   GRRKTSIKSLAAELCLDRAVVXXXXXXXXXXXXXXXXXXXHRIVQTTLEPESKPVDP-SV 179
           GRRKTSIKSLAAELCLDRAVV                    + V T   PE++PV+   +
Sbjct: 199 GRRKTSIKSLAAELCLDRAVVLELLREPPPNLLLMSAALPDKPVPTITVPETEPVEAVPL 258

Query: 180 EFTKDVLEP----QPEVK--LSVHMMQSRWSMQKRLKKVQLETLERVYNRTKRPTNAMIS 341
           + T+  +E     +PEVK  + VH+MQSRWS QKRLKKVQ+ETLERVY RTKRPTNAMIS
Sbjct: 259 DTTRGAVEAAEPAEPEVKGKVPVHVMQSRWSAQKRLKKVQVETLERVYRRTKRPTNAMIS 318

Query: 342 SVVHVTNLPRKRVVKWFEDKRAEDGVPHNRLPYQ 443
           S+VHVTNLPRKRVVKWFEDKR EDGVP +RLP+Q
Sbjct: 319 SIVHVTNLPRKRVVKWFEDKRTEDGVPEHRLPFQ 352


>ref|XP_002308655.1| predicted protein [Populus trichocarpa] gi|222854631|gb|EEE92178.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  163 bits (412), Expect = 3e-38
 Identities = 87/156 (55%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   GRRKTSIKSLAAELCLDRAVVXXXXXXXXXXXXXXXXXXXHRIVQTTLEPESKPVDPSVE 182
           GRRKT IKSLAAELCLDRA+V                        T + PE+KP +   E
Sbjct: 182 GRRKTGIKSLAAELCLDRAIVLNLLRDPPPNLVMMSAALPDEPAPTLVMPETKPSEIVPE 241

Query: 183 FTKD--VLEPQPEVKLSVHMMQSRWSMQKRLKKVQLETLERVYNRTKRPTNAMISSVVHV 356
            T++  V++ + E+KL VH+ Q  W  +KRLKKV +ETLERVY RTKRPTN MISS+VHV
Sbjct: 242 ETREENVVKSESEMKLPVHVRQDSWFARKRLKKVHVETLERVYRRTKRPTNTMISSIVHV 301

Query: 357 TNLPRKRVVKWFEDKRAEDGVPHNRLPYQPSTSESM 464
           TNLPRKRVVKWFEDKRA DGVP +R P+Q S  E++
Sbjct: 302 TNLPRKRVVKWFEDKRAGDGVPEHRNPFQRSVPETV 337


>ref|XP_003526417.1| PREDICTED: uncharacterized protein LOC100798718 [Glycine max]
          Length = 338

 Score =  160 bits (405), Expect = 2e-37
 Identities = 83/154 (53%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   GRRKTSIKSLAAELCLDRAVVXXXXXXXXXXXXXXXXXXXHRIVQTTLEPESKPVD-PSV 179
           GRRKTSIK+LAA+LCLDRA+V                        T +  E+KP +    
Sbjct: 184 GRRKTSIKNLAADLCLDRALVLQMLRDPPPNLLMMSLTIPDEPATTVVSLETKPSEIVHK 243

Query: 180 EFTKDVLEPQPEVKLSVHMMQSRWSMQKRLKKVQLETLERVYNRTKRPTNAMISSVVHVT 359
           E + D  EP+P+ K+ VH +Q  W  QKRLKK  ++TLERVY R+KRPTNAMISS+VHVT
Sbjct: 244 ETSIDHAEPEPKAKVPVHTLQRNWHAQKRLKKAHVDTLERVYRRSKRPTNAMISSIVHVT 303

Query: 360 NLPRKRVVKWFEDKRAEDGVPHNRLPYQPSTSES 461
           N+PRK+VVKWFEDKRAE+GVP  R+PYQ S  E+
Sbjct: 304 NIPRKKVVKWFEDKRAEEGVPDRRVPYQRSVPET 337


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