BLASTX nr result

ID: Coptis24_contig00008017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008017
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310568.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
ref|XP_002307092.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002533203.1| conserved hypothetical protein [Ricinus comm...   368   2e-99
ref|XP_002866887.1| hypothetical protein ARALYDRAFT_490769 [Arab...   361   3e-97
ref|XP_004143470.1| PREDICTED: uncharacterized protein LOC101209...   360   5e-97

>ref|XP_002310568.1| predicted protein [Populus trichocarpa] gi|222853471|gb|EEE91018.1|
            predicted protein [Populus trichocarpa]
          Length = 451

 Score =  374 bits (959), Expect = e-101
 Identities = 214/427 (50%), Positives = 266/427 (62%), Gaps = 41/427 (9%)
 Frame = +1

Query: 73   QSQPQRKQFMGRRRMXXXXXXXXXXXXQVQPKKKTSLVSKNQTKLIXXXXXXXXXXXXXX 252
            Q+Q + KQF+ RRRM            QV  KK T++ SKNQTKL               
Sbjct: 38   QTQLEAKQFLVRRRMLEVETNED----QVPKKKSTNMSSKNQTKLAKPSLSTKNQTKLIK 93

Query: 253  XXXXXXXXXXXXXX-----------------FKKLNATS--RSPNSTKLNTITT--TKKS 369
                                            KKLN+TS  +  NST      +  TKK+
Sbjct: 94   TGSLSTKNQTKITKSTNSTKATPTPSNSTSQLKKLNSTSQLKKLNSTSKAAANSAPTKKT 153

Query: 370  IDLPK-----NKT---------------KVINTQTEKKPKSQNNQEAIKITEXXXXXXXX 489
             DL K     NKT               KV +T+++K+ K+Q      K  +        
Sbjct: 154  SDLLKLGPSTNKTTKPASTKQTPSLVDKKVGDTESQKQNKNQKQTNPKKTPQTKKQQ--- 210

Query: 490  XXXXXXNWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSRAYINQANKEISEGFRP 669
                  +W++ +D+DDLV+EFRDLPSKF QT+LPDLER+S+TS+ Y+ QANK++++GF+P
Sbjct: 211  ------SWLDQDDEDDLVAEFRDLPSKFHQTILPDLERLSITSKKYLTQANKDLTKGFKP 264

Query: 670  LVGKQYAPTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYLSIYFSILSFA 849
            +VG +YA TIAS VS  F+ +PLLLVSL+FNRIKAYFS+QKILIF+QVYLSIYF+IL  +
Sbjct: 265  IVGSKYASTIASTVSFAFILIPLLLVSLVFNRIKAYFSIQKILIFIQVYLSIYFTILCLS 324

Query: 850  SIVTGLEPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXXSTETGLGLKVLGLG 1029
            ++VTGLEPLKFFYA+SQS+Y+CL VFQTL                 S E G+G K+LGLG
Sbjct: 325  ALVTGLEPLKFFYATSQSNYVCLMVFQTLGYVLYLLLLLMYLILVFSAECGMGSKLLGLG 384

Query: 1030 QTLVGFAVGLHYYVTVFHRAVLHQPPRTNWKIHGIYAACFLVICLLANAERRKKAYLEDG 1209
            QTLVGFA+GLHYYV VFHR VLHQPP+TNWKIHGIYA CFLVICL ANAERRKKAYLE+G
Sbjct: 385  QTLVGFAIGLHYYVAVFHRVVLHQPPKTNWKIHGIYATCFLVICLFANAERRKKAYLEEG 444

Query: 1210 GEEGKKS 1230
            GEEGKK+
Sbjct: 445  GEEGKKN 451


>ref|XP_002307092.1| predicted protein [Populus trichocarpa] gi|222856541|gb|EEE94088.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  370 bits (951), Expect = e-100
 Identities = 191/322 (59%), Positives = 233/322 (72%), Gaps = 11/322 (3%)
 Frame = +1

Query: 298  KKLNATSRSPNSTKLNTITTTKKSIDLPK-----------NKTKVINTQTEKKPKSQNNQ 444
            KKLN+TS++ N TK +   +TKK+ DL K             TK   +  +KK  +Q +Q
Sbjct: 93   KKLNSTSKASNFTK-SIAGSTKKTPDLLKLGSSTDKTTKPTSTKQTQSLVDKKVGNQESQ 151

Query: 445  EAIKITEXXXXXXXXXXXXXXNWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSRA 624
            +  K  +              +W+   D+DDLV+EFRDLPSKF QTL+PDLERIS+TS+ 
Sbjct: 152  KQNKNQKQTNEKKTTQSKKQPSWIGQHDEDDLVAEFRDLPSKFHQTLIPDLERISITSKK 211

Query: 625  YINQANKEISEGFRPLVGKQYAPTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIF 804
            Y+ +AN +++ GF+P+VG +YAPTIASIVS  F+ +PLLLVSLIFN IKAYFS+QKILIF
Sbjct: 212  YLTKANNDLTRGFKPIVGNKYAPTIASIVSFAFILIPLLLVSLIFNHIKAYFSIQKILIF 271

Query: 805  VQVYLSIYFSILSFASIVTGLEPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXX 984
            +QVYLSIYF+IL  +S+VTGLEPLKFFYA+SQS+Y+CL V QTL                
Sbjct: 272  IQVYLSIYFTILCLSSLVTGLEPLKFFYATSQSTYVCLMVLQTLGYALYLLLLLMYLILV 331

Query: 985  XSTETGLGLKVLGLGQTLVGFAVGLHYYVTVFHRAVLHQPPRTNWKIHGIYAACFLVICL 1164
             STE GL  K LGLGQTLVG+AVGLHYYV VFHR VLHQPP+TNWK+HGIYA CFLVICL
Sbjct: 332  FSTECGLSSKFLGLGQTLVGYAVGLHYYVAVFHRVVLHQPPKTNWKVHGIYATCFLVICL 391

Query: 1165 LANAERRKKAYLEDGGEEGKKS 1230
             ANAERRKKAYLE+GGEEGKK+
Sbjct: 392  FANAERRKKAYLEEGGEEGKKN 413


>ref|XP_002533203.1| conserved hypothetical protein [Ricinus communis]
            gi|223526979|gb|EEF29174.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 458

 Score =  368 bits (945), Expect = 2e-99
 Identities = 210/424 (49%), Positives = 266/424 (62%), Gaps = 42/424 (9%)
 Frame = +1

Query: 85   QRKQFMGRRRMXXXXXXXXXXXXQVQPKKK-TSLVSKNQTKLIXXXXXXXXXXXXXXXXX 261
            + KQF GRRRM            Q+ PKKK  +L +KNQTKLI                 
Sbjct: 42   ESKQFFGRRRMLEVENDQEQD--QLSPKKKIANLSTKNQTKLIKSSLSTKNQTISKLTKP 99

Query: 262  XXXXXXXXXXX---------------------FKKLNATSRSPNSTKLNTITTTKKSIDL 378
                                             KKLN+TS+S NSTK  T + TKK+ DL
Sbjct: 100  TNSTKSSTTLSKNELKKLNSTSQLKKLNSISQLKKLNSTSKSYNSTK-PTSSFTKKTSDL 158

Query: 379  -----PKNKT---------------KVINTQTEKKPKSQNNQEAIKITEXXXXXXXXXXX 498
                 PKNKT               K  +++++K+ K+Q   E    T+           
Sbjct: 159  LKLGSPKNKTTKPTSSKDTQILADKKNSDSESQKQTKNQKTNERKASTKKTTTQSQKQP- 217

Query: 499  XXXNWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSRAYINQANKEISEGFRPLVG 678
               +W++ E +DDLV+EFRDLPSKFQQTLLPDLERIS+TS+ Y+ +ANKE+++GF+P+VG
Sbjct: 218  ---SWLDQEMEDDLVAEFRDLPSKFQQTLLPDLERISITSKKYLTKANKEMTKGFKPIVG 274

Query: 679  KQYAPTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYLSIYFSILSFASIV 858
             +YA   A++VS  F+ +PLLLVSL+FNRIKAYFS+QKI+IF+QVYLSIYFSIL  +S+V
Sbjct: 275  NKYASATATVVSFAFITIPLLLVSLVFNRIKAYFSIQKIVIFIQVYLSIYFSILCLSSLV 334

Query: 859  TGLEPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXXSTETGLGLKVLGLGQTL 1038
            TGLEPL+FFYA+S+S+Y+CL V QTL                 STE+GLG ++LGLGQ  
Sbjct: 335  TGLEPLRFFYATSESTYVCLMVLQTLGYVLYLLLLLMYLILVFSTESGLGSRLLGLGQIF 394

Query: 1039 VGFAVGLHYYVTVFHRAVLHQPPRTNWKIHGIYAACFLVICLLANAERRKKAYLEDGGEE 1218
            VGFA+GLH+YV+VFHR VLHQPP+TNWK+H IYA CFLVICLLA  +RRKKAYLEDGGEE
Sbjct: 395  VGFAIGLHFYVSVFHRVVLHQPPKTNWKVHAIYATCFLVICLLAKFDRRKKAYLEDGGEE 454

Query: 1219 GKKS 1230
            GKK+
Sbjct: 455  GKKN 458


>ref|XP_002866887.1| hypothetical protein ARALYDRAFT_490769 [Arabidopsis lyrata subsp.
            lyrata] gi|297312723|gb|EFH43146.1| hypothetical protein
            ARALYDRAFT_490769 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  361 bits (926), Expect = 3e-97
 Identities = 186/317 (58%), Positives = 232/317 (73%), Gaps = 6/317 (1%)
 Frame = +1

Query: 298  KKLNATSRSPNSTKLNTITTTKKSIDL-----PKNKTKVINTQTEKKPKSQNNQEAIK-I 459
            KKLN+ ++S NST     ++ KKS DL     PKNKT   +  +   P  + +  + K +
Sbjct: 142  KKLNSGTKSTNST-----SSIKKSADLSKSSSPKNKTTTKSKLSSPPPSEKKSPPSSKPV 196

Query: 460  TEXXXXXXXXXXXXXXNWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSRAYINQA 639
            T+               W++ E+D+D VSEFRDLP+KFQ++L+PDLERIS TS+ YIN+A
Sbjct: 197  TKSKQPEKEIKPF----WLDDEEDEDFVSEFRDLPTKFQRSLIPDLERISTTSKNYINKA 252

Query: 640  NKEISEGFRPLVGKQYAPTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQVYL 819
            NKEI++ F+P  G +YAPTIAS+VS VF+ +PLLLVSLIFNR KAYFSLQKILIF+Q+YL
Sbjct: 253  NKEITKNFKPYFGNKYAPTIASVVSFVFILVPLLLVSLIFNRFKAYFSLQKILIFIQIYL 312

Query: 820  SIYFSILSFASIVTGLEPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXXSTET 999
            SIYFSIL  +S+VTG+EPLKF YA+S S+Y+CLQ+ QTL                 ST+ 
Sbjct: 313  SIYFSILCLSSLVTGIEPLKFLYATSSSTYVCLQILQTLGYVFYLLLLLMYLVLVFSTDC 372

Query: 1000 GLGLKVLGLGQTLVGFAVGLHYYVTVFHRAVLHQPPRTNWKIHGIYAACFLVICLLANAE 1179
            GLGLKVLGL QT VGFAVGLHYYV VFHR VL QPP+TNWKIHG+YA CFL+ICLL+NAE
Sbjct: 373  GLGLKVLGLAQTFVGFAVGLHYYVAVFHRVVLRQPPKTNWKIHGVYATCFLLICLLSNAE 432

Query: 1180 RRKKAYLEDGGEEGKKS 1230
            RRKK YLE+GG+EGKK+
Sbjct: 433  RRKKEYLEEGGDEGKKN 449


>ref|XP_004143470.1| PREDICTED: uncharacterized protein LOC101209867 [Cucumis sativus]
            gi|449496445|ref|XP_004160136.1| PREDICTED:
            uncharacterized protein LOC101229824 [Cucumis sativus]
          Length = 446

 Score =  360 bits (924), Expect = 5e-97
 Identities = 188/319 (58%), Positives = 232/319 (72%), Gaps = 9/319 (2%)
 Frame = +1

Query: 301  KLNATSRSPNSTKLNTITTTKKSIDL-----PKNKTKVINT----QTEKKPKSQNNQEAI 453
            KLN+TS+S NSTK  T  + KKS DL     PKNKT   N+    QT    K+   Q++ 
Sbjct: 129  KLNSTSKSSNSTK-TTPLSAKKSSDLLKSSTPKNKTTTPNSSKQSQTTHLDKTNKEQKSE 187

Query: 454  KITEXXXXXXXXXXXXXXNWMEIEDDDDLVSEFRDLPSKFQQTLLPDLERISLTSRAYIN 633
            K                 +W++ ++D+DLVSEFRDL +KFQ+TL+PDL RIS TS+AYI 
Sbjct: 188  KKPNEEKPKKQVQAKAKPSWVDDDEDEDLVSEFRDLTTKFQKTLIPDLARISTTSKAYIT 247

Query: 634  QANKEISEGFRPLVGKQYAPTIASIVSCVFMFLPLLLVSLIFNRIKAYFSLQKILIFVQV 813
            +ANK+++ GF+P+VG +YA TIAS+ S  F+ +PL+LVSL+FNRIKAYFSLQK+LIF+QV
Sbjct: 248  KANKQMTMGFKPIVGNKYASTIASLTSFAFILIPLILVSLLFNRIKAYFSLQKLLIFIQV 307

Query: 814  YLSIYFSILSFASIVTGLEPLKFFYASSQSSYICLQVFQTLAXXXXXXXXXXXXXXXXST 993
            YL+IYF IL  +S+VTGLEPLKFFY++SQS+YICLQV QTL                 ST
Sbjct: 308  YLAIYFGILCLSSVVTGLEPLKFFYSTSQSTYICLQVMQTLGYILYLLFLVMYLVLVFST 367

Query: 994  ETGLGLKVLGLGQTLVGFAVGLHYYVTVFHRAVLHQPPRTNWKIHGIYAACFLVICLLAN 1173
            + GLG ++LGL QT VG+AVGLHYYV+VFHR VLHQPPRTNWKIHGIYA CFLVIC LA 
Sbjct: 368  DCGLGSRMLGLAQTFVGYAVGLHYYVSVFHRMVLHQPPRTNWKIHGIYATCFLVICGLAG 427

Query: 1174 AERRKKAYLEDGGEEGKKS 1230
            AERRKK+YLE+ G EGKKS
Sbjct: 428  AERRKKSYLEEDGTEGKKS 446


Top