BLASTX nr result

ID: Coptis24_contig00008015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008015
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27221.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266...   376   e-102
ref|XP_002265181.1| PREDICTED: uncharacterized protein LOC100251...   371   e-100
emb|CAN74487.1| hypothetical protein VITISV_029271 [Vitis vinifera]   371   e-100
ref|XP_002304263.1| predicted protein [Populus trichocarpa] gi|2...   353   4e-95

>emb|CBI27221.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  380 bits (976), Expect = e-103
 Identities = 207/353 (58%), Positives = 230/353 (65%), Gaps = 18/353 (5%)
 Frame = +1

Query: 82   MGKKKKR-ASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHK 258
            MGKKKKR A+KVWCYYCDREF+DEKILVQHQKA+HFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1    MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 259  ETVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXX 438
            ETV+KVPNAKP RESTEIEI+GMEGIP EILAAHYGE+DED PSK+AKV+IPS+      
Sbjct: 61   ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 439  XXXXXXXXXXXHSNFGAMQPIYNSALAV----XXXXXXXXXXXXXXXAVSMPTAGPVGMA 606
                           GAM P+YN ALAV                   A+S+P A P+GM 
Sbjct: 121  VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISIPPA-PLGMT 179

Query: 607  QQPLFPIQNVTHPMSSVTTXXXXXXXXXXXXGLPSLTP--PVSQPLFPVGGNGSIP---- 768
            QQPLFPIQ V  P+ S  +            GLP  +P  P+ QPLFPVG N ++P    
Sbjct: 180  QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 769  -------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPTIQGGSFIGSHSYASGPNTG 927
                                                 + P+IQGG  I SHSYASGPNTG
Sbjct: 240  PFSTPMLSTSIPLSSQAELNSSIEAHSSTNSSLASSYSAPSIQGGPSINSHSYASGPNTG 299

Query: 928  GPSIGPPPVIANKAPAPQPATNEVYLVWDDDAMSMEERRMSLVKYQVHDETSQ 1086
            GPSIGPPPVIANK PA QPA NEVYLVWDD+AMSMEERRMSL+KYQVHDETSQ
Sbjct: 300  GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQ 352


>ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266425 [Vitis vinifera]
          Length = 362

 Score =  376 bits (965), Expect = e-102
 Identities = 204/342 (59%), Positives = 226/342 (66%), Gaps = 7/342 (2%)
 Frame = +1

Query: 82   MGKKKKR-ASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHK 258
            MGKKKKR A+KVWCYYCDREF+DEKILVQHQKA+HFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1    MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 259  ETVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXX 438
            ETV+KVPNAKP RESTEIEI+GMEGIP EILAAHYGE+DED PSK+AKV+IPS+      
Sbjct: 61   ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 439  XXXXXXXXXXXHSNFGAMQPIYNSALAV----XXXXXXXXXXXXXXXAVSMPTAGPVGMA 606
                           GAM P+YN ALAV                   A+S+P A P+GM 
Sbjct: 121  VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISIPPA-PLGMT 179

Query: 607  QQPLFPIQNVTHPMSSVTTXXXXXXXXXXXXGLPSLTP--PVSQPLFPVGGNGSIPXXXX 780
            QQPLFPIQ V  P+ S  +            GLP  +P  P+ QPLFPVG N ++P    
Sbjct: 180  QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLP--TK 237

Query: 781  XXXXXXXXXXXXXXXXXXXXXXXXXXAPPTIQGGSFIGSHSYASGPNTGGPSIGPPPVIA 960
                                      A  +   G  I SHSYASGPNTGGPSIGPPPVIA
Sbjct: 238  NSPFSTPMLSTSIPLSSQAELNSSIEAHSSTNSGPSINSHSYASGPNTGGPSIGPPPVIA 297

Query: 961  NKAPAPQPATNEVYLVWDDDAMSMEERRMSLVKYQVHDETSQ 1086
            NK PA QPA NEVYLVWDD+AMSMEERRMSL+KYQVHDETSQ
Sbjct: 298  NKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQ 339


>ref|XP_002265181.1| PREDICTED: uncharacterized protein LOC100251787 [Vitis vinifera]
            gi|296087547|emb|CBI34136.3| unnamed protein product
            [Vitis vinifera]
          Length = 366

 Score =  371 bits (952), Expect = e-100
 Identities = 200/346 (57%), Positives = 228/346 (65%), Gaps = 11/346 (3%)
 Frame = +1

Query: 82   MGKKKKRASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHKE 261
            MGKKKKRA+KV+CYYC+REF+DEKILVQHQKA+HFKCHVC+KKLSTA GM+IHVLQVHKE
Sbjct: 1    MGKKKKRAAKVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKE 60

Query: 262  TVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXXX 441
            TV+KVPNA P RESTEIEIFGM+GIP +ILAAHYGEQDED PSK+AKV++P  N      
Sbjct: 61   TVSKVPNANPGRESTEIEIFGMQGIPDDILAAHYGEQDEDNPSKLAKVEVPPTNVVGVMP 120

Query: 442  XXXXXXXXXXHSNFGAMQPIYNSALAV--XXXXXXXXXXXXXXXAVSMPTAGPVGMAQQP 615
                       S FGA+ PIYNSA+AV                 AV +P A P+G+AQ+P
Sbjct: 121  PGSVGMGFPPQSTFGAIPPIYNSAVAVPPGWPVPRPQPWFPQHPAVPVPPAAPLGLAQRP 180

Query: 616  LFPIQNVTHPMSSVTTXXXXXXXXXXXXGLPSLTPPVSQPLFPVGGNGSIPXXXXXXXXX 795
            LFPIQNVT P+ S T              L S   PVSQPLFPV G  SIP         
Sbjct: 181  LFPIQNVTPPLPSATLQPSFQTTPPGP--LSSSPTPVSQPLFPVVGTASIPSQNSQVTAA 238

Query: 796  XXXXXXXXXXXXXXXXXXXXXA---------PPTIQGGSFIGSHSYASGPNTGGPSIGPP 948
                                            P+IQ G+ + SH+YASG NT GPSIGPP
Sbjct: 239  ALSAPITSSTPSELNNPSYSSINTSMVNGYHAPSIQ-GTLVSSHTYASGSNTSGPSIGPP 297

Query: 949  PVIANKAPAPQPATNEVYLVWDDDAMSMEERRMSLVKYQVHDETSQ 1086
            P+IANKAP  QPA+NEVYLVWDD+AMSMEERRMSL+KYQVHDETSQ
Sbjct: 298  PMIANKAPVIQPASNEVYLVWDDEAMSMEERRMSLLKYQVHDETSQ 343


>emb|CAN74487.1| hypothetical protein VITISV_029271 [Vitis vinifera]
          Length = 394

 Score =  371 bits (952), Expect = e-100
 Identities = 200/346 (57%), Positives = 228/346 (65%), Gaps = 11/346 (3%)
 Frame = +1

Query: 82   MGKKKKRASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHKE 261
            MGKKKKRA+KV+CYYC+REF+DEKILVQHQKA+HFKCHVC+KKLSTA GM+IHVLQVHKE
Sbjct: 1    MGKKKKRAAKVFCYYCEREFEDEKILVQHQKAKHFKCHVCNKKLSTASGMAIHVLQVHKE 60

Query: 262  TVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXXX 441
            TV+KVPNA P RESTEIEIFGM+GIP +ILAAHYGEQDED PSK+AKV++P  N      
Sbjct: 61   TVSKVPNANPGRESTEIEIFGMQGIPDDILAAHYGEQDEDNPSKLAKVEVPPTNVVGVMP 120

Query: 442  XXXXXXXXXXHSNFGAMQPIYNSALAV--XXXXXXXXXXXXXXXAVSMPTAGPVGMAQQP 615
                       S FGA+ PIYNSA+AV                 AV +P A P+G+AQ+P
Sbjct: 121  PGSVGMGFPPQSTFGAIPPIYNSAVAVPPGWPVPRPQPWFPQHPAVPVPPAAPLGLAQRP 180

Query: 616  LFPIQNVTHPMSSVTTXXXXXXXXXXXXGLPSLTPPVSQPLFPVGGNGSIPXXXXXXXXX 795
            LFPIQNVT P+ S T              L S   PVSQPLFPV G  SIP         
Sbjct: 181  LFPIQNVTPPLPSATLQPSFQTTPPGP--LSSSPTPVSQPLFPVVGTASIPSQNSQVIAA 238

Query: 796  XXXXXXXXXXXXXXXXXXXXXA---------PPTIQGGSFIGSHSYASGPNTGGPSIGPP 948
                                            P+IQ G+ + SH+YASG NT GPSIGPP
Sbjct: 239  ALSAPITSSTPSELNNPSYSSINTSMVNGYHAPSIQ-GTLVSSHTYASGSNTSGPSIGPP 297

Query: 949  PVIANKAPAPQPATNEVYLVWDDDAMSMEERRMSLVKYQVHDETSQ 1086
            P+IANKAP  QPA+NEVYLVWDD+AMSMEERRMSL+KYQVHDETSQ
Sbjct: 298  PMIANKAPVIQPASNEVYLVWDDEAMSMEERRMSLLKYQVHDETSQ 343


>ref|XP_002304263.1| predicted protein [Populus trichocarpa] gi|222841695|gb|EEE79242.1|
            predicted protein [Populus trichocarpa]
          Length = 385

 Score =  353 bits (906), Expect = 4e-95
 Identities = 199/364 (54%), Positives = 221/364 (60%), Gaps = 29/364 (7%)
 Frame = +1

Query: 82   MGKKKKRA-SKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHK 258
            MGKKKKRA SKVWCYYCDREFDDEKILVQHQKA+HFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1    MGKKKKRAASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 259  ETVTKVPNAKPDRESTEIEIFGMEGIPPEILAAHYGEQDEDAPSKMAKVDIPSANFTXXX 438
            E+VTKVPNAKP REST+IEI+GM+GIPP++LAAHYGE++++ PSK AKVDIPSA      
Sbjct: 61   ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEDENPSKAAKVDIPSAQLVGGM 120

Query: 439  XXXXXXXXXXXHSNFGAMQP---------------IYNSAL----AVXXXXXXXXXXXXX 561
                            AMQP               +YNSA+    A              
Sbjct: 121  VPGPLGAGYPPRP-LAAMQPMSGPCTLGPVKLWNYLYNSAVPAPHAGWPVPPRSQHWLPQ 179

Query: 562  XXAVSMPTAGPVGMAQQPLFPIQNVTHPMSSVTTXXXXXXXXXXXXGLPSLTPPVSQPLF 741
              AVS+P   P+   QQPLFP+QNV  P+ S  T            GLPS TP VSQPLF
Sbjct: 180  HPAVSIPPPAPITYTQQPLFPVQNVRPPVPSTMT-PALIPSQVTPPGLPSSTPSVSQPLF 238

Query: 742  PVGGN--------GSIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPTIQGGSFIG- 894
            PV  N           P                                 +      +G 
Sbjct: 239  PVNNNLPQSSTFSAPFPSTSLLPSSPAEVRGSMNVHLGVNTSMTTGYLTQSASASGTLGN 298

Query: 895  SHSYASGPNTGGPSIGPPPVIANKAPAPQPATNEVYLVWDDDAMSMEERRMSLVKYQVHD 1074
            +HSYASGPNTGGPSIGPPPVIANKAP  QPA NEVYLVWDD+AMSMEERRMSL KYQVHD
Sbjct: 299  THSYASGPNTGGPSIGPPPVIANKAPVIQPAVNEVYLVWDDEAMSMEERRMSLPKYQVHD 358

Query: 1075 ETSQ 1086
            ETSQ
Sbjct: 359  ETSQ 362


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