BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008013
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   217   4e-54
emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera]   216   7e-54
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...   200   7e-49
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...   200   7e-49
ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containi...   199   9e-49

>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial [Vitis vinifera]
          Length = 496

 Score =  217 bits (553), Expect = 4e-54
 Identities = 109/181 (60%), Positives = 131/181 (72%)
 Frame = -1

Query: 1217 CKPDTLFYNALIHVLGRAGRLCEAAHIFEVEMPMSGIIPNTSTYNTMIAMYCHHSQEQSA 1038
            CKPDTLFYNALIH LGRAG+L EA  +FEVEMP +G+ PNTSTYN+MIAM+CHHSQEQ A
Sbjct: 316  CKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKA 375

Query: 1037 LFVLQEMEKSTLCKPDLKTYNPLLKLCLRTGKIXXXXXXXXXDMLKKXXXXXXXXXXXXX 858
            L +L+E+E ST CKPD++TY P+LK C +TGKI         DM+ K             
Sbjct: 376  LNLLREIENSTFCKPDIQTYYPVLKSCFKTGKI-DSLSNFLDDMVNKHHLSLDVSAYTLL 434

Query: 857  XXXLCRANKCERAYNVLEEMIRQEIRPRYQTCRLLLDEVKQKSMTDVSDRIEDLMKQMKT 678
               LCRANKCE  YN+ EEM+ + I PRY+TC LLLDE+KQK+M D ++RIE  MKQMKT
Sbjct: 435  IHGLCRANKCEWGYNLFEEMVGKAITPRYKTCALLLDEIKQKNMHDAAERIEVFMKQMKT 494

Query: 677  S 675
            S
Sbjct: 495  S 495


>emb|CAN63349.1| hypothetical protein VITISV_024448 [Vitis vinifera]
          Length = 324

 Score =  216 bits (551), Expect = 7e-54
 Identities = 108/181 (59%), Positives = 130/181 (71%)
 Frame = -1

Query: 1217 CKPDTLFYNALIHVLGRAGRLCEAAHIFEVEMPMSGIIPNTSTYNTMIAMYCHHSQEQSA 1038
            CKPDTLFYNALIH LGRAG+L EA H+FEVEMP +G+ PNTSTYN+MIAM+CHHSQEQ A
Sbjct: 6    CKPDTLFYNALIHTLGRAGQLREAVHVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKA 65

Query: 1037 LFVLQEMEKSTLCKPDLKTYNPLLKLCLRTGKIXXXXXXXXXDMLKKXXXXXXXXXXXXX 858
            L +L+E+E ST CKPD++TY P+LK C +TGKI         DM+ K             
Sbjct: 66   LNLLREIENSTFCKPDIQTYYPVLKSCFKTGKI-DSLSNFLDDMVNKHHLSLDVSAYTLL 124

Query: 857  XXXLCRANKCERAYNVLEEMIRQEIRPRYQTCRLLLDEVKQKSMTDVSDRIEDLMKQMKT 678
               LC ANKCE  YN+ EEM+ + I PRY+TC LLLDE+KQK+M D ++ IE  MKQMKT
Sbjct: 125  IHGLCXANKCEXGYNLFEEMVXKAITPRYKTCALLLDEIKQKNMHDAAEGIEVFMKQMKT 184

Query: 677  S 675
            S
Sbjct: 185  S 185


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial-like [Cucumis sativus]
          Length = 488

 Score =  200 bits (508), Expect = 7e-49
 Identities = 96/177 (54%), Positives = 125/177 (70%)
 Frame = -1

Query: 1214 KPDTLFYNALIHVLGRAGRLCEAAHIFEVEMPMSGIIPNTSTYNTMIAMYCHHSQEQSAL 1035
            +PDTLFYN LIH LGRAG++ EA H+FEVEMP   ++PNTSTYN+MIAMYC  ++E+ A+
Sbjct: 312  EPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAM 371

Query: 1034 FVLQEMEKSTLCKPDLKTYNPLLKLCLRTGKIXXXXXXXXXDMLKKXXXXXXXXXXXXXX 855
             +L+EM+KS  CKPD++TY PLLK C RTGK          +M+ K              
Sbjct: 372  KLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLLI 431

Query: 854  XXLCRANKCERAYNVLEEMIRQEIRPRYQTCRLLLDEVKQKSMTDVSDRIEDLMKQM 684
              LCRANKC+ AY + E+MI Q+I+PRY TC+LLLDE KQK+M  V+DRIE +MK++
Sbjct: 432  HGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIMKKL 488


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  200 bits (508), Expect = 7e-49
 Identities = 96/177 (54%), Positives = 125/177 (70%)
 Frame = -1

Query: 1214 KPDTLFYNALIHVLGRAGRLCEAAHIFEVEMPMSGIIPNTSTYNTMIAMYCHHSQEQSAL 1035
            +PDTLFYN LIH LGRAG++ EA H+FEVEMP   ++PNTSTYN+MIAMYC  ++E+ A+
Sbjct: 343  EPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAM 402

Query: 1034 FVLQEMEKSTLCKPDLKTYNPLLKLCLRTGKIXXXXXXXXXDMLKKXXXXXXXXXXXXXX 855
             +L+EM+KS  CKPD++TY PLLK C RTGK          +M+ K              
Sbjct: 403  KLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDISTYSLLI 462

Query: 854  XXLCRANKCERAYNVLEEMIRQEIRPRYQTCRLLLDEVKQKSMTDVSDRIEDLMKQM 684
              LCRANKC+ AY + E+MI Q+I+PRY TC+LLLDE KQK+M  V+DRIE +MK++
Sbjct: 463  HGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIMKKL 519


>ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
            mitochondrial-like [Glycine max]
          Length = 490

 Score =  199 bits (507), Expect = 9e-49
 Identities = 96/178 (53%), Positives = 130/178 (73%)
 Frame = -1

Query: 1217 CKPDTLFYNALIHVLGRAGRLCEAAHIFEVEMPMSGIIPNTSTYNTMIAMYCHHSQEQSA 1038
            C+PDTLF+N+LIH LGRAGRL +AA +F+VEMP +G+ PNTSTYN+MI+M+C+H+QE+ A
Sbjct: 313  CRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRA 372

Query: 1037 LFVLQEMEKSTLCKPDLKTYNPLLKLCLRTGKIXXXXXXXXXDMLKKXXXXXXXXXXXXX 858
            L +L+EME S  CKPD +TY+PL+K C R+GKI         DM+ K             
Sbjct: 373  LEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLL 432

Query: 857  XXXLCRANKCERAYNVLEEMIRQEIRPRYQTCRLLLDEVKQKSMTDVSDRIEDLMKQM 684
               LCR ++C  A+++ EEMI Q+I PRY+TCRLLLDEVKQK+M   +++IEDLMK++
Sbjct: 433  IHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIEDLMKKL 490